Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340574
Identifier: 158340574
GI number: 158340574
Start: 107167
End: 107724
Strand: Reverse
Name: 158340574
Synonym: AM1_C0122
Alternate gene names: NA
Gene position: 107724-107167 (Counterclockwise)
Preceding gene: 158340575
Following gene: 158340568
Centisome position: 39.44
GC content: 46.95
Gene sequence:
>558_bases TTGTTCTTTGACGAATTTGCGGTGTCTGAGCGTCCTAGTTTGTTCTATGGCTGGGCAGAACGCAACACTCGTCCACAGGT CAAGAGTAATGAGCGGGCTCGCAACAAGCTCAATGGGTTACTGTGCGTCGATGCCCACAGTGGCGAAGAGTATTTCGCTC TGAGCCCACAGGCTAAAACGGAAGATATCTCTGAGTACTTTGCAGGCCTATGTCTGGATAGCGTTGAGCTGGGCTACACT CAACTGTGCCTTATTCTCGATAACAATCCGACCCATAAGGGCAAGATGCGCTCCCAACTCGCTATCCATCTAGAGCAGAT GGGGCTCACCCAATCGATTCAAGTTGAGTTTTTATATTTGCCGTCCTACTCTCCCAAGTTGAACTTGGTTGAATATGTGA TTCACTTACTACGCTTACGATGTCTGCACCATCTCCCTCTTGGAACGACCCTGACACAGATCAAACAACAGCTCCATGAG TTCTTTGCTGCTAACCAGTTTCTATCGGCTGAACAAGTTCAAAACAGCCTGAATTTTATATTTTCACTTGTTCCATAA
Upstream 100 bases:
>100_bases CGCGCCCATCGTGACTATGCGAATGCTGACCTGAACGCCCAGAAAGAGTGGGTGGCGGCTGTTAAAAAAACTGCAATCAC GACAATCGGATGAGCGCATC
Downstream 100 bases:
>100_bases TCTTATGGCGGGAAGGGAGTAATTACATGTGTGGTAAATACTCACTTATTTCTAAACCAGAATTCCTATAAGCATCTAAT GCCTCTAGCCATATCCTACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MFFDEFAVSERPSLFYGWAERNTRPQVKSNERARNKLNGLLCVDAHSGEEYFALSPQAKTEDISEYFAGLCLDSVELGYT QLCLILDNNPTHKGKMRSQLAIHLEQMGLTQSIQVEFLYLPSYSPKLNLVEYVIHLLRLRCLHHLPLGTTLTQIKQQLHE FFAANQFLSAEQVQNSLNFIFSLVP
Sequences:
>Translated_185_residues MFFDEFAVSERPSLFYGWAERNTRPQVKSNERARNKLNGLLCVDAHSGEEYFALSPQAKTEDISEYFAGLCLDSVELGYT QLCLILDNNPTHKGKMRSQLAIHLEQMGLTQSIQVEFLYLPSYSPKLNLVEYVIHLLRLRCLHHLPLGTTLTQIKQQLHE FFAANQFLSAEQVQNSLNFIFSLVP >Mature_185_residues MFFDEFAVSERPSLFYGWAERNTRPQVKSNERARNKLNGLLCVDAHSGEEYFALSPQAKTEDISEYFAGLCLDSVELGYT QLCLILDNNPTHKGKMRSQLAIHLEQMGLTQSIQVEFLYLPSYSPKLNLVEYVIHLLRLRCLHHLPLGTTLTQIKQQLHE FFAANQFLSAEQVQNSLNFIFSLVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21225; Mature: 21225
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFDEFAVSERPSLFYGWAERNTRPQVKSNERARNKLNGLLCVDAHSGEEYFALSPQAKT CCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCEEEEECCCCCCEEEECCCCCH EDISEYFAGLCLDSVELGYTQLCLILDNNPTHKGKMRSQLAIHLEQMGLTQSIQVEFLYL HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEC PSYSPKLNLVEYVIHLLRLRCLHHLPLGTTLTQIKQQLHEFFAANQFLSAEQVQNSLNFI CCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSLVP HHCCC >Mature Secondary Structure MFFDEFAVSERPSLFYGWAERNTRPQVKSNERARNKLNGLLCVDAHSGEEYFALSPQAKT CCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCEEEEECCCCCCEEEECCCCCH EDISEYFAGLCLDSVELGYTQLCLILDNNPTHKGKMRSQLAIHLEQMGLTQSIQVEFLYL HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEC PSYSPKLNLVEYVIHLLRLRCLHHLPLGTTLTQIKQQLHEFFAANQFLSAEQVQNSLNFI CCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSLVP HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA