Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340531
Identifier: 158340531
GI number: 158340531
Start: 74220
End: 75284
Strand: Reverse
Name: 158340531
Synonym: AM1_C0076
Alternate gene names: NA
Gene position: 75284-74220 (Counterclockwise)
Preceding gene: 158340532
Following gene: 158340530
Centisome position: 27.56
GC content: 48.54
Gene sequence:
>1065_bases ATGACTCAATATAGCGAACTCAAAAGTGCTCTCCAACCCCACCTGAACTGGCATGGTGCCCGTTTATCATTCCTGACCTT GTTCTTGTTGGCCTTGTTTAAGGTCAAAACCGTTAACCTGAGTGAATTAGCACTGGGGTTTGAAGGGAGCGCTCAATCCG ACTCCAAGTACAAACGTTTGCAACGCTTCTTCCGAGGATTTGACCTTGAGTATGCGACCATCGCCAAGCTGGTCATCGAC TGGATGCAAACTCCACAGCCATGGGTCTTGAGTATTGACCGCACCACCTGGGAGTTTGGTACTCACTGCTTCAACATCCT CAGCATTGGTGTCGTCCATGAGGGAGTTGCTTTCCCTCTGTTGTGGTGGATGCTCCAGAAGAAAGGCAACTCCAGTAGTG ATGAACGGATGCGATTTGTTGAAGCGCTCCTGCATATCTGCCCTGATCTCCAAATCCGATATTTGTGTGGGGATCGAGAA TTCATTGGCCAGCTTTGGGTTCGCTATTTACGCTTAGCTCCACTCTTGCCGTTTCGGCTCAGAATTCGAGCGACGGATAA AATTGAGCGCCAGGGTAAGGCCCTTCAAACCAAGGTGGTCTTTGCTCATCTCCAAGTGGGTCAACGCCAGCGCCTGAAAG GTGACTGCCGTGTATGGGGACAGCCGGTTGCGGTGGAAGGACTGCGCTTGGAAGATGGTGCACTGCTGGTTGTGATTGGT CCGACACAAGATGACCAGCTCATTGATGATTATGCCTTGCGATGGGGAATTGAAACCCTCTTTGGTATTTTCAAAACTCG CGGTTTTTGTCTTGAATCGACTCACTTTACTGAAGCGGAACGCTTACGAAAGCTATTTGCCCTATTGACTTTGGCATTGT ATTGGGCGATGAAGACAGGGCTGTTTTTACATCAACTCAAACCCATTGCCCTCAAAACCCATGAACGTCGAGCAAAGAGT CTATTCCGTTTAGGATTTGACCATTTTCGGCAGATGATTCTCAATCCTTCTCCCGGTAATGAACGTGAGTTCCTGCAATC TTTACAACTTTTGTCCAGTACTTAG
Upstream 100 bases:
>100_bases TTATGAGTGAGGCCCTCAAGGATCTCAGTACAGGACAAAAAGCTTGAAAGGTCTATAGAGGTGGGATTTCAATAGGATTA CCACAATCCCTAGAAACCCC
Downstream 100 bases:
>100_bases AAGCACTGTACCTTACTATGATCAAACAGTTTGGACCGCTCAAATTAATAACCCAGTTTGTATGACTATACTTAAGGCTG TGCAGTTATTCATTGCCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase IS4 Family Protein; Transposase Subunit; Tn10-Like Transposase
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MTQYSELKSALQPHLNWHGARLSFLTLFLLALFKVKTVNLSELALGFEGSAQSDSKYKRLQRFFRGFDLEYATIAKLVID WMQTPQPWVLSIDRTTWEFGTHCFNILSIGVVHEGVAFPLLWWMLQKKGNSSSDERMRFVEALLHICPDLQIRYLCGDRE FIGQLWVRYLRLAPLLPFRLRIRATDKIERQGKALQTKVVFAHLQVGQRQRLKGDCRVWGQPVAVEGLRLEDGALLVVIG PTQDDQLIDDYALRWGIETLFGIFKTRGFCLESTHFTEAERLRKLFALLTLALYWAMKTGLFLHQLKPIALKTHERRAKS LFRLGFDHFRQMILNPSPGNEREFLQSLQLLSST
Sequences:
>Translated_354_residues MTQYSELKSALQPHLNWHGARLSFLTLFLLALFKVKTVNLSELALGFEGSAQSDSKYKRLQRFFRGFDLEYATIAKLVID WMQTPQPWVLSIDRTTWEFGTHCFNILSIGVVHEGVAFPLLWWMLQKKGNSSSDERMRFVEALLHICPDLQIRYLCGDRE FIGQLWVRYLRLAPLLPFRLRIRATDKIERQGKALQTKVVFAHLQVGQRQRLKGDCRVWGQPVAVEGLRLEDGALLVVIG PTQDDQLIDDYALRWGIETLFGIFKTRGFCLESTHFTEAERLRKLFALLTLALYWAMKTGLFLHQLKPIALKTHERRAKS LFRLGFDHFRQMILNPSPGNEREFLQSLQLLSST >Mature_353_residues TQYSELKSALQPHLNWHGARLSFLTLFLLALFKVKTVNLSELALGFEGSAQSDSKYKRLQRFFRGFDLEYATIAKLVIDW MQTPQPWVLSIDRTTWEFGTHCFNILSIGVVHEGVAFPLLWWMLQKKGNSSSDERMRFVEALLHICPDLQIRYLCGDREF IGQLWVRYLRLAPLLPFRLRIRATDKIERQGKALQTKVVFAHLQVGQRQRLKGDCRVWGQPVAVEGLRLEDGALLVVIGP TQDDQLIDDYALRWGIETLFGIFKTRGFCLESTHFTEAERLRKLFALLTLALYWAMKTGLFLHQLKPIALKTHERRAKSL FRLGFDHFRQMILNPSPGNEREFLQSLQLLSST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41054; Mature: 40922
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQYSELKSALQPHLNWHGARLSFLTLFLLALFKVKTVNLSELALGFEGSAQSDSKYKRL CCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHH QRFFRGFDLEYATIAKLVIDWMQTPQPWVLSIDRTTWEFGTHCFNILSIGVVHEGVAFPL HHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHH LWWMLQKKGNSSSDERMRFVEALLHICPDLQIRYLCGDREFIGQLWVRYLRLAPLLPFRL HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEE RIRATDKIERQGKALQTKVVFAHLQVGQRQRLKGDCRVWGQPVAVEGLRLEDGALLVVIG EEECHHHHHHCCHHHHHHHHHHHHHHCHHHHCCCCHHCCCCCEEEECEEECCCEEEEEEC PTQDDQLIDDYALRWGIETLFGIFKTRGFCLESTHFTEAERLRKLFALLTLALYWAMKTG CCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH LFLHQLKPIALKTHERRAKSLFRLGFDHFRQMILNPSPGNEREFLQSLQLLSST HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure TQYSELKSALQPHLNWHGARLSFLTLFLLALFKVKTVNLSELALGFEGSAQSDSKYKRL CCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHH QRFFRGFDLEYATIAKLVIDWMQTPQPWVLSIDRTTWEFGTHCFNILSIGVVHEGVAFPL HHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHH LWWMLQKKGNSSSDERMRFVEALLHICPDLQIRYLCGDREFIGQLWVRYLRLAPLLPFRL HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEE RIRATDKIERQGKALQTKVVFAHLQVGQRQRLKGDCRVWGQPVAVEGLRLEDGALLVVIG EEECHHHHHHCCHHHHHHHHHHHHHHCHHHHCCCCHHCCCCCEEEECEEECCCEEEEEEC PTQDDQLIDDYALRWGIETLFGIFKTRGFCLESTHFTEAERLRKLFALLTLALYWAMKTG CCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH LFLHQLKPIALKTHERRAKSLFRLGFDHFRQMILNPSPGNEREFLQSLQLLSST HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA