Click here to switch to the map view.

The map label for this gene is 158340398

Identifier: 158340398

GI number: 158340398

Start: 225840

End: 226166

Strand: Direct

Name: 158340398

Synonym: AM1_C0325

Alternate gene names: NA

Gene position: 225840-226166 (Clockwise)

Preceding gene: 158340396

Following gene: 158340399

Centisome position: 82.69

GC content: 47.4

Gene sequence:

>327_bases
ATGTCCAAGCCTTTGGCAATGGTTACAACCGAGTTTTTAGATCGCCCTGGCTTAGCTGCCAGCACGGTTCGCTCCTACGA
ATTCACCTTATTGCCTTTGCTTCAACAATATGGTCAGTGGTCCTTAGAATTACTCGACCGACAGACCCTAGAAGAATATC
TCAATTCCTTGAGCCATCTATCGTTCAAGACTCATCATCGTCACCAAGCCATCCTACAAGCACTCCTCAACTTTGCAGTT
GAGCAAGGATACCTGCGGTCTAATCCAATGACCCGTATGAAACGGCGTAAGCCAGATCCTGCTAAAGGAGAGCATGACTC
AGACTAG

Upstream 100 bases:

>100_bases
TAGATTCTAAACGCTGCATTACAAGCTTACTCATCAATCATTCATCAGAGGTATACTTCATGCGGCTGTTGGAGCCTTAA
GACTTAACAGAAAGATCATC

Downstream 100 bases:

>100_bases
ATCATTCGATACCTAACCCCAGACCAACTACAGCTGCAATACCAACTGGTCAGCAAAGATGCTCGTACTGCAGCTCTTGT
CCGCTTACTCCATCGCACCG

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Integrase; Site-Specific Recombinase XerD-Like Protein; Integrase Family Protein

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MSKPLAMVTTEFLDRPGLAASTVRSYEFTLLPLLQQYGQWSLELLDRQTLEEYLNSLSHLSFKTHHRHQAILQALLNFAV
EQGYLRSNPMTRMKRRKPDPAKGEHDSD

Sequences:

>Translated_108_residues
MSKPLAMVTTEFLDRPGLAASTVRSYEFTLLPLLQQYGQWSLELLDRQTLEEYLNSLSHLSFKTHHRHQAILQALLNFAV
EQGYLRSNPMTRMKRRKPDPAKGEHDSD
>Mature_107_residues
SKPLAMVTTEFLDRPGLAASTVRSYEFTLLPLLQQYGQWSLELLDRQTLEEYLNSLSHLSFKTHHRHQAILQALLNFAVE
QGYLRSNPMTRMKRRKPDPAKGEHDSD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12512; Mature: 12381

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKPLAMVTTEFLDRPGLAASTVRSYEFTLLPLLQQYGQWSLELLDRQTLEEYLNSLSHL
CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
SFKTHHRHQAILQALLNFAVEQGYLRSNPMTRMKRRKPDPAKGEHDSD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SKPLAMVTTEFLDRPGLAASTVRSYEFTLLPLLQQYGQWSLELLDRQTLEEYLNSLSHL
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
SFKTHHRHQAILQALLNFAVEQGYLRSNPMTRMKRRKPDPAKGEHDSD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA