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The map label for this gene is tnpA [H]

Identifier: 158340399

GI number: 158340399

Start: 226960

End: 228750

Strand: Direct

Name: tnpA [H]

Synonym: AM1_C0327

Alternate gene names: 158340399

Gene position: 226960-228750 (Clockwise)

Preceding gene: 158340398

Following gene: 158340401

Centisome position: 83.1

GC content: 49.53

Gene sequence:

>1791_bases
ATGAAGCGCCAATGGCAGCCGGATGAACTGATTGAATCCTTCATTTTGTTGCCCAATGAGTTGGAGCTTATTCCCAACTA
TCAGACCAACGCCACGGAGCATAACCAGCTGGGTTTTGCTGTGCTGCTGAAATTCTTTCAACTTGAAGGTCGCTTCCCCA
AGCACCTGGGCGAGATTCCTCAGATCGTCGTGGAGTTCATTGCCAAACAACTAAAGCTGACGCATCAAAGCTTGGTTGAT
TACAAATGGAAAGGCCGGACTATCAAGGAGCATCGAGCTATCATCCGTTCCTTTCTCGGATGTCGTCCCACCCAGCAACC
CGAAAAGAAGTCATTGATGACCTGGCTCAAAGAGAAAGTGATGCCTCTGGGGCTCCATTTGAATGCGATTCGAGAGCAAG
CCTATCAACGTCTGCGTCACCTTAAGCTTGAACCCCCTTCCCCCAAAGAATTGACCCGGCTTATCAGCTCAGCTGCCCAC
AACCATGAACAGGACTTTTGCCAAACAATTGCGGCACGACTCCCAGCAGATACTCGAAAAAGGATGGATGCTTTATTAGA
AACAGAATTCACCCGAGACCATGAGGAAAGTCAGTTCCGGCAGTCCGACTTCAACCGTCTCAAGTCAGATCCGGGGCGTC
TAGGCCTGAAAAGTCTCTTCAATGAAATCGATAAGCTGCAAAGTATCCGACAGATTCAGCTGCCTACAGATCTATTTGCC
TCCTATTCTCCTAAGCTGATTGAGCAATATCGGCGTCGAGCCTCAGCCGACCTGGCGGGACGCCTACGCCGCCACCCAAA
GGCCATTCGCTACACTCTCATTGCTTCGTTCTGTTATCAACGCGAAAAAGAGATCACTGATAATCTAGTCGATTTGCTAG
TCCAGACCATCCATCGTCTTAGCATCAGTGCCGAGCGTCGTGTAGAGCGAGAACTGATCGCTAATTTCAAACGCGTCAAT
AATAAAGAGGCCCTTCTATACCGAATTGCGGAAGCGGCCTTAGCCAATCCAGATCAACCCGTTAAAGAGGTGATCTTTCC
GGTCGTTAGTCCCGATAAATTGACTAACGTAATTGAGGAGCGAAAACGAACCGGCATTACCTACCGAGAAAAAGTGAATG
TCAAGATTCGAGCCTCTTATTTGCATCACTATCGGCGGATGGTGCCGGCCATTTTGGAGACCCTGGATTTTCACTCCAAC
AACGAGCAGCATCGCCCTGTCATTGAGGCCATTGAATTGCTCAGGCAGTATCAGGGCAGTGGAAAGCGATACTTCACTGA
GGATGAAAAGGTGATCACCACTGGTGTCCTAAAAAGCGGTTGGCGCGAGCTCGTCATCGAATCCAATTCCAAAGGCCAAG
ACCAGGTCAACCGCGTCAACTATGAAATCTGTGTCTTGCAAACGCTGCGAGACACACTGCGCTGTCGTGAAGTGTGGGTG
ATGGGTGCCAAACGCTACGGGAATCCTGATACGGATTTACCCCAAGATTTTGAAGCTCAACGAGAGCAGTACTATTTAGA
ACTCAACCAACCCTTGGATGCTGAAGCCTTCGTCACGAAACTGAAACTGGATATGACGGCAGCTCTGTCCTCCTTAAATA
CGAGCATCCCCAACGATCCACAGGTCAATATTCTGTCCCGAGGTAACGGCTGGATTAGTGTTACCCCCTACCCGGCTCAA
GAGGAACCCAGTAATATCCACAAACTGAAACAGGAGGTGGCGAAACGCTGGCCAATGACCAGCTTGTTGGACATCCTCAA
GGAAACGGACCTGCGCGTTAATTTGGCCTAA

Upstream 100 bases:

>100_bases
TCCTTGCTAAGAGCTACAGCAATAGCGGGACACACACTTTTGGATTCATCTGCAAAATCCGCTATCTTGTCGCGAGGGAG
TGGTAAGCGGAGCAAGCGAT

Downstream 100 bases:

>100_bases
AACGACCGAAGCTGAGATGGGCCAATGACGTTGCTCAAGCATCGATTCTGTCCGTATTGTTGAACGGCCTATCAAGCCCC
AAAAGCACTCCATGTGGTGA

Product: transposase, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 596; Mature: 596

Protein sequence:

>596_residues
MKRQWQPDELIESFILLPNELELIPNYQTNATEHNQLGFAVLLKFFQLEGRFPKHLGEIPQIVVEFIAKQLKLTHQSLVD
YKWKGRTIKEHRAIIRSFLGCRPTQQPEKKSLMTWLKEKVMPLGLHLNAIREQAYQRLRHLKLEPPSPKELTRLISSAAH
NHEQDFCQTIAARLPADTRKRMDALLETEFTRDHEESQFRQSDFNRLKSDPGRLGLKSLFNEIDKLQSIRQIQLPTDLFA
SYSPKLIEQYRRRASADLAGRLRRHPKAIRYTLIASFCYQREKEITDNLVDLLVQTIHRLSISAERRVERELIANFKRVN
NKEALLYRIAEAALANPDQPVKEVIFPVVSPDKLTNVIEERKRTGITYREKVNVKIRASYLHHYRRMVPAILETLDFHSN
NEQHRPVIEAIELLRQYQGSGKRYFTEDEKVITTGVLKSGWRELVIESNSKGQDQVNRVNYEICVLQTLRDTLRCREVWV
MGAKRYGNPDTDLPQDFEAQREQYYLELNQPLDAEAFVTKLKLDMTAALSSLNTSIPNDPQVNILSRGNGWISVTPYPAQ
EEPSNIHKLKQEVAKRWPMTSLLDILKETDLRVNLA

Sequences:

>Translated_596_residues
MKRQWQPDELIESFILLPNELELIPNYQTNATEHNQLGFAVLLKFFQLEGRFPKHLGEIPQIVVEFIAKQLKLTHQSLVD
YKWKGRTIKEHRAIIRSFLGCRPTQQPEKKSLMTWLKEKVMPLGLHLNAIREQAYQRLRHLKLEPPSPKELTRLISSAAH
NHEQDFCQTIAARLPADTRKRMDALLETEFTRDHEESQFRQSDFNRLKSDPGRLGLKSLFNEIDKLQSIRQIQLPTDLFA
SYSPKLIEQYRRRASADLAGRLRRHPKAIRYTLIASFCYQREKEITDNLVDLLVQTIHRLSISAERRVERELIANFKRVN
NKEALLYRIAEAALANPDQPVKEVIFPVVSPDKLTNVIEERKRTGITYREKVNVKIRASYLHHYRRMVPAILETLDFHSN
NEQHRPVIEAIELLRQYQGSGKRYFTEDEKVITTGVLKSGWRELVIESNSKGQDQVNRVNYEICVLQTLRDTLRCREVWV
MGAKRYGNPDTDLPQDFEAQREQYYLELNQPLDAEAFVTKLKLDMTAALSSLNTSIPNDPQVNILSRGNGWISVTPYPAQ
EEPSNIHKLKQEVAKRWPMTSLLDILKETDLRVNLA
>Mature_596_residues
MKRQWQPDELIESFILLPNELELIPNYQTNATEHNQLGFAVLLKFFQLEGRFPKHLGEIPQIVVEFIAKQLKLTHQSLVD
YKWKGRTIKEHRAIIRSFLGCRPTQQPEKKSLMTWLKEKVMPLGLHLNAIREQAYQRLRHLKLEPPSPKELTRLISSAAH
NHEQDFCQTIAARLPADTRKRMDALLETEFTRDHEESQFRQSDFNRLKSDPGRLGLKSLFNEIDKLQSIRQIQLPTDLFA
SYSPKLIEQYRRRASADLAGRLRRHPKAIRYTLIASFCYQREKEITDNLVDLLVQTIHRLSISAERRVERELIANFKRVN
NKEALLYRIAEAALANPDQPVKEVIFPVVSPDKLTNVIEERKRTGITYREKVNVKIRASYLHHYRRMVPAILETLDFHSN
NEQHRPVIEAIELLRQYQGSGKRYFTEDEKVITTGVLKSGWRELVIESNSKGQDQVNRVNYEICVLQTLRDTLRCREVWV
MGAKRYGNPDTDLPQDFEAQREQYYLELNQPLDAEAFVTKLKLDMTAALSSLNTSIPNDPQVNILSRGNGWISVTPYPAQ
EEPSNIHKLKQEVAKRWPMTSLLDILKETDLRVNLA

Specific function: Required for transposition of transposon Tn21 [H]

COG id: COG4644

COG function: function code L; Transposase and inactivated derivatives, TnpA family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 7 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002513 [H]

Pfam domain/function: PF01526 Transposase_7 [H]

EC number: NA

Molecular weight: Translated: 69464; Mature: 69464

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEECC
>Mature Secondary Structure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CEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3029727; 2992807; 6312271 [H]