Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340393
Identifier: 158340393
GI number: 158340393
Start: 223546
End: 223920
Strand: Reverse
Name: 158340393
Synonym: AM1_C0320
Alternate gene names: NA
Gene position: 223920-223546 (Counterclockwise)
Preceding gene: 158340397
Following gene: 158340390
Centisome position: 81.99
GC content: 45.07
Gene sequence:
>375_bases GTGAGTAGCTTGTTTGAGTATGTTGCTGAAGTCATGTATTTTGTCTCTGATCGCTATGCGGCAGCAGCGTGGTATTCATC CTTGTTTGACATTGAGATTACCTGGTTAGAGAATTTGGAGCACTTCTTTATAAAAGTTGGCAATCATGAAGTATGTTTTC ATCAATCGGATAGCAAAGTGCCATCAGGAGCAGCGGGACATGTTGCCTATTGGCAAGTTGCAGATTTCGGTGTGGTACTT GAACGAGCACTCAATTTAGGAGCCAAGCTCTATCGTGGCCCATTAGATCGACAAGATGGGAAGTATATGTGCCAGGTGAT GGATCCTGACGGGAACTTGATTGGCCTAATCGGTCCAAGCCATGAGGAGAACTGA
Upstream 100 bases:
>100_bases GGGTAGACTTGGGATTGTTTTAGGCTGGCTGATACGGGTTGTGGTGTCCTAGTATTCCATTAGACGGTGTTGGTGTCAGC AGTTGATAGAGTAATTGTAG
Downstream 100 bases:
>100_bases GACCCAAGCTCCCTCACACCCCCACCCCCCGAACCTCCACCGGAAGATCTTTGGCCCTGCGGAAGCGCCAGAGGAGAACC CCGGAGCTTCCTAGGACAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MSSLFEYVAEVMYFVSDRYAAAAWYSSLFDIEITWLENLEHFFIKVGNHEVCFHQSDSKVPSGAAGHVAYWQVADFGVVL ERALNLGAKLYRGPLDRQDGKYMCQVMDPDGNLIGLIGPSHEEN
Sequences:
>Translated_124_residues MSSLFEYVAEVMYFVSDRYAAAAWYSSLFDIEITWLENLEHFFIKVGNHEVCFHQSDSKVPSGAAGHVAYWQVADFGVVL ERALNLGAKLYRGPLDRQDGKYMCQVMDPDGNLIGLIGPSHEEN >Mature_123_residues SSLFEYVAEVMYFVSDRYAAAAWYSSLFDIEITWLENLEHFFIKVGNHEVCFHQSDSKVPSGAAGHVAYWQVADFGVVLE RALNLGAKLYRGPLDRQDGKYMCQVMDPDGNLIGLIGPSHEEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13996; Mature: 13865
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLFEYVAEVMYFVSDRYAAAAWYSSLFDIEITWLENLEHFFIKVGNHEVCFHQSDSKV CCHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEEHHHHCCCEEEEEECCCEEEEECCCCCC PSGAAGHVAYWQVADFGVVLERALNLGAKLYRGPLDRQDGKYMCQVMDPDGNLIGLIGPS CCCCCCCEEEEEHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEEECCCCCEEEEECCC HEEN CCCC >Mature Secondary Structure SSLFEYVAEVMYFVSDRYAAAAWYSSLFDIEITWLENLEHFFIKVGNHEVCFHQSDSKV CHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEEHHHHCCCEEEEEECCCEEEEECCCCCC PSGAAGHVAYWQVADFGVVLERALNLGAKLYRGPLDRQDGKYMCQVMDPDGNLIGLIGPS CCCCCCCEEEEEHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEEECCCCCEEEEECCC HEEN CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA