Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340390
Identifier: 158340390
GI number: 158340390
Start: 222230
End: 222496
Strand: Reverse
Name: 158340390
Synonym: AM1_C0317
Alternate gene names: NA
Gene position: 222496-222230 (Counterclockwise)
Preceding gene: 158340393
Following gene: 158340389
Centisome position: 81.46
GC content: 50.19
Gene sequence:
>267_bases ATGACTGTAGCACTTCTGACTCCAGAGCAACGATATGCTGCTCTCTATCCCAAGACTCGGAAGTTCGATATCACCATCGA TTTCTACCCTGGCGTGAGAGGCGGCGGCAAAGAAATCGACCTAACCATCGAGCTTCCCAGTCAGGCCCATGTGACCAGTC GCCAACAATGCGAACGGTGGGTAGAAGAAAACTATCCTTCAGGTCGCCTGATTTTTGTTCAGCCTATATTCACGACTCAG CAGTTACTGGCTGAGGACGAATTCTAG
Upstream 100 bases:
>100_bases TCAAAGGATAGAGACAAAACTTTCATTAAAAGAGCCGCTGGACATTCCGGGCAGGAGACTCCAGCGGCTCTCCATGTAAA CCCTCTACGAGGTTCACGAC
Downstream 100 bases:
>100_bases TCCATCCACCACAGGGGCACCTCTTGCCCCTGCCCCGTCTCAGGAACATTCAGAGGACACAATCTTATGACCATTACAGA AGCAACCCAAGCCCCCACTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MTVALLTPEQRYAALYPKTRKFDITIDFYPGVRGGGKEIDLTIELPSQAHVTSRQQCERWVEENYPSGRLIFVQPIFTTQ QLLAEDEF
Sequences:
>Translated_88_residues MTVALLTPEQRYAALYPKTRKFDITIDFYPGVRGGGKEIDLTIELPSQAHVTSRQQCERWVEENYPSGRLIFVQPIFTTQ QLLAEDEF >Mature_87_residues TVALLTPEQRYAALYPKTRKFDITIDFYPGVRGGGKEIDLTIELPSQAHVTSRQQCERWVEENYPSGRLIFVQPIFTTQQ LLAEDEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10164; Mature: 10032
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVALLTPEQRYAALYPKTRKFDITIDFYPGVRGGGKEIDLTIELPSQAHVTSRQQCERW CEEEEECCCCCEEEECCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCHHHHHHH VEENYPSGRLIFVQPIFTTQQLLAEDEF HHCCCCCCCEEEEEECCCHHHHHHCCCC >Mature Secondary Structure TVALLTPEQRYAALYPKTRKFDITIDFYPGVRGGGKEIDLTIELPSQAHVTSRQQCERW EEEEECCCCCEEEECCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCHHHHHHH VEENYPSGRLIFVQPIFTTQQLLAEDEF HHCCCCCCCEEEEEECCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA