Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340389
Identifier: 158340389
GI number: 158340389
Start: 221819
End: 222163
Strand: Reverse
Name: 158340389
Synonym: AM1_C0316
Alternate gene names: NA
Gene position: 222163-221819 (Counterclockwise)
Preceding gene: 158340390
Following gene: 158340388
Centisome position: 81.34
GC content: 48.7
Gene sequence:
>345_bases ATGACCATTACAGAAGCAACCCAAGCCCCCACTATTGCCCAGCTCAATGACCGCTTCCGCCAAGGTGACCATACCCTAGG CCAGGTCTACACGACTCAGCTTGTTCAAGGTCTTTCGTCAAAGGAACAACAAGAACTCTTCCGATTGGTCCGCACGTTCG ATGAGTTTACGAAAGATAATGACCTGTGGAAAGAGCATGATTACGGGAGTGTGGAGTTCAAGGGTGGAAAATACTTTTTC AAGATTGACTATTACGCGCCGGATCTGATCCACGGTTCAGAAGACCCCACTAACACAGCCATCACCACCCGAGTGATGAC CATCATGCACTCCAGTGAGTATTAA
Upstream 100 bases:
>100_bases GACTCAGCAGTTACTGGCTGAGGACGAATTCTAGTCCATCCACCACAGGGGCACCTCTTGCCCCTGCCCCGTCTCAGGAA CATTCAGAGGACACAATCTT
Downstream 100 bases:
>100_bases CGTCTTCCGTCGCACCCTGGCTTGCGGGCTAGGGCTCTTCCCATCTCAGATTGGTAAAATGACAATAACCAAGGAGCTTA CGATGACAGCATCTGACCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MTITEATQAPTIAQLNDRFRQGDHTLGQVYTTQLVQGLSSKEQQELFRLVRTFDEFTKDNDLWKEHDYGSVEFKGGKYFF KIDYYAPDLIHGSEDPTNTAITTRVMTIMHSSEY
Sequences:
>Translated_114_residues MTITEATQAPTIAQLNDRFRQGDHTLGQVYTTQLVQGLSSKEQQELFRLVRTFDEFTKDNDLWKEHDYGSVEFKGGKYFF KIDYYAPDLIHGSEDPTNTAITTRVMTIMHSSEY >Mature_113_residues TITEATQAPTIAQLNDRFRQGDHTLGQVYTTQLVQGLSSKEQQELFRLVRTFDEFTKDNDLWKEHDYGSVEFKGGKYFFK IDYYAPDLIHGSEDPTNTAITTRVMTIMHSSEY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13206; Mature: 13075
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTITEATQAPTIAQLNDRFRQGDHTLGQVYTTQLVQGLSSKEQQELFRLVRTFDEFTKDN CCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC DLWKEHDYGSVEFKGGKYFFKIDYYAPDLIHGSEDPTNTAITTRVMTIMHSSEY CCCCCCCCCCEEECCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure TITEATQAPTIAQLNDRFRQGDHTLGQVYTTQLVQGLSSKEQQELFRLVRTFDEFTKDN CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC DLWKEHDYGSVEFKGGKYFFKIDYYAPDLIHGSEDPTNTAITTRVMTIMHSSEY CCCCCCCCCCEEECCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA