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The map label for this gene is ykoG [H]

Identifier: 158340377

GI number: 158340377

Start: 215938

End: 216606

Strand: Direct

Name: ykoG [H]

Synonym: AM1_C0304

Alternate gene names: 158340377

Gene position: 215938-216606 (Clockwise)

Preceding gene: 158340372

Following gene: 158340378

Centisome position: 79.06

GC content: 46.94

Gene sequence:

>669_bases
ATGGCCCATATTCTTATTGCTGAGGATGAACCACGGATTGCATCTTTTATCGAGAAAGGTCTAAAAAGCCATGGCTTTAC
CACTACTACCATCGGTGATGCGCATGCAACCCTATCCCTCGCGGCGAGTGGTGAATTTGATCTTTTAATACTAGACCTGG
GATTGCCGGATAGAGACGGACTTGAAGTTCTAGCTGATTTGCGAGGACATGGGGCTAAATTACCCATCCTTATTTTGACC
GCCAGAGATGATATTCAAGACAAGATTTCTGGCCTTGAGGGTGGGGCAGATGACTATATGACTAAACCCTTTCGATTTGA
AGAGTTACTTGCCAGGGTACGTGTTCGCCTGAGAACCAATATCCATCAATCAACCTCTCAACCACTGACGATGGTGGCTC
GTAATGTGGTGCTAGATTTACGGGCTCGTAAAGCCAAAGTCCATGATCAGTGGATTGAACTACCTGCCCGGGAGTTTATT
CTCACTGAAGCTTTCTTCCAACATCCGGGACAAGTACTCAGTCGCCAGCAACTTCTAGATCGCGTCTGGGGATATGACTA
TGATCCAGGATCCAACATTGTGGATGTCTATGTGGGCTATCTACGCAAAAAGCTGGGTGACGATCTGATTCAGACTGTAC
GAGGGGTTGGGTATCGGCTAAATGCTTAG

Upstream 100 bases:

>100_bases
CTGCACTCCCCAGCGTATTACCTTTCAATTTATTTCAAGGGAACCAGAGTAATTACCACCACTGTCTCTATAGTTATTGC
CGTGTCACTGCTGAATACCG

Downstream 100 bases:

>100_bases
TCTAGATGAAGACGTTATGGCAATATCCAAACAGCAAAAACATCTACTGATTATTCCCAATCGCTCACTATGGGGAAGTT
TTTTTCGCCAAACCCGGACA

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MAHILIAEDEPRIASFIEKGLKSHGFTTTTIGDAHATLSLAASGEFDLLILDLGLPDRDGLEVLADLRGHGAKLPILILT
ARDDIQDKISGLEGGADDYMTKPFRFEELLARVRVRLRTNIHQSTSQPLTMVARNVVLDLRARKAKVHDQWIELPAREFI
LTEAFFQHPGQVLSRQQLLDRVWGYDYDPGSNIVDVYVGYLRKKLGDDLIQTVRGVGYRLNA

Sequences:

>Translated_222_residues
MAHILIAEDEPRIASFIEKGLKSHGFTTTTIGDAHATLSLAASGEFDLLILDLGLPDRDGLEVLADLRGHGAKLPILILT
ARDDIQDKISGLEGGADDYMTKPFRFEELLARVRVRLRTNIHQSTSQPLTMVARNVVLDLRARKAKVHDQWIELPAREFI
LTEAFFQHPGQVLSRQQLLDRVWGYDYDPGSNIVDVYVGYLRKKLGDDLIQTVRGVGYRLNA
>Mature_221_residues
AHILIAEDEPRIASFIEKGLKSHGFTTTTIGDAHATLSLAASGEFDLLILDLGLPDRDGLEVLADLRGHGAKLPILILTA
RDDIQDKISGLEGGADDYMTKPFRFEELLARVRVRLRTNIHQSTSQPLTMVARNVVLDLRARKAKVHDQWIELPAREFIL
TEAFFQHPGQVLSRQQLLDRVWGYDYDPGSNIVDVYVGYLRKKLGDDLIQTVRGVGYRLNA

Specific function: Probable member of the two-component regulatory system ykoH/ykoG [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786784, Length=227, Percent_Identity=40.9691629955947, Blast_Score=159, Evalue=2e-40,
Organism=Escherichia coli, GI1790552, Length=219, Percent_Identity=36.5296803652968, Blast_Score=145, Evalue=3e-36,
Organism=Escherichia coli, GI1786911, Length=226, Percent_Identity=39.3805309734513, Blast_Score=142, Evalue=1e-35,
Organism=Escherichia coli, GI1789402, Length=217, Percent_Identity=37.3271889400922, Blast_Score=140, Evalue=5e-35,
Organism=Escherichia coli, GI87082012, Length=223, Percent_Identity=34.9775784753363, Blast_Score=134, Evalue=3e-33,
Organism=Escherichia coli, GI1789809, Length=224, Percent_Identity=34.8214285714286, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1786599, Length=225, Percent_Identity=33.7777777777778, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1790860, Length=222, Percent_Identity=37.8378378378378, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1787375, Length=219, Percent_Identity=34.703196347032, Blast_Score=120, Evalue=5e-29,
Organism=Escherichia coli, GI1787229, Length=226, Percent_Identity=32.7433628318584, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1788394, Length=226, Percent_Identity=32.7433628318584, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1790863, Length=232, Percent_Identity=31.8965517241379, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI2367329, Length=229, Percent_Identity=33.6244541484716, Blast_Score=100, Evalue=8e-23,
Organism=Escherichia coli, GI145693140, Length=232, Percent_Identity=28.448275862069, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1788550, Length=106, Percent_Identity=30.188679245283, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1790299, Length=136, Percent_Identity=31.6176470588235, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1787487, Length=103, Percent_Identity=32.0388349514563, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 24871; Mature: 24740

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHILIAEDEPRIASFIEKGLKSHGFTTTTIGDAHATLSLAASGEFDLLILDLGLPDRDG
CCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCHHEEEEEECCCEEEEEEECCCCCCCH
LEVLADLRGHGAKLPILILTARDDIQDKISGLEGGADDYMTKPFRFEELLARVRVRLRTN
HHHHHHHHCCCCCCCEEEEECCCHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHH
IHQSTSQPLTMVARNVVLDLRARKAKVHDQWIELPAREFILTEAFFQHPGQVLSRQQLLD
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHH
RVWGYDYDPGSNIVDVYVGYLRKKLGDDLIQTVRGVGYRLNA
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEECCC
>Mature Secondary Structure 
AHILIAEDEPRIASFIEKGLKSHGFTTTTIGDAHATLSLAASGEFDLLILDLGLPDRDG
CEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCHHEEEEEECCCEEEEEEECCCCCCCH
LEVLADLRGHGAKLPILILTARDDIQDKISGLEGGADDYMTKPFRFEELLARVRVRLRTN
HHHHHHHHCCCCCCCEEEEECCCHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHH
IHQSTSQPLTMVARNVVLDLRARKAKVHDQWIELPAREFILTEAFFQHPGQVLSRQQLLD
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHH
RVWGYDYDPGSNIVDVYVGYLRKKLGDDLIQTVRGVGYRLNA
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]