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The map label for this gene is 158340299

Identifier: 158340299

GI number: 158340299

Start: 167047

End: 167250

Strand: Reverse

Name: 158340299

Synonym: AM1_C0220

Alternate gene names: NA

Gene position: 167250-167047 (Counterclockwise)

Preceding gene: 158340300

Following gene: 158340284

Centisome position: 61.24

GC content: 35.29

Gene sequence:

>204_bases
GTGGACAATTTTGTAGAGCTTTCCCTAGAACAAAAATTCAGTTTGCAATCATTTGAGTACCAAGTCCAAAAGATGAGTAA
AGAACAAGCTCAGGATTTTTTAATCCAGCTTTATAAACAAATGATCATTAAAGAGACAATGTACAAACAGCTCATCAAGC
AGGAATGGGATATAAGCAAACCCTTTGCTCCCTTAGATGACTAA

Upstream 100 bases:

>100_bases
TGAAAGTAATGAGGCAGGCTACCAGTTGAGTCAATCTTTAGAGGATTACCTGACGTAGTCTACCTGGATAATCGTAATAC
ACATGTGAGGTGGATAACCG

Downstream 100 bases:

>100_bases
CTAACTTTTCTAAGACTGATCTTTCCAAACAAGATTTGGCAGTTATGATCTATGCCCAGACAGAGAGGTTGCTCTAGATT
ATTGCTTTGGAGAGGAATGA

Product: phycobilisome degradation family protein

Products: NA

Alternate protein names: Phycobilisome Degradation Protein; Phycobilisome Degradation Family Protein; NblA-Related Protein

Number of amino acids: Translated: 67; Mature: 67

Protein sequence:

>67_residues
MDNFVELSLEQKFSLQSFEYQVQKMSKEQAQDFLIQLYKQMIIKETMYKQLIKQEWDISKPFAPLDD

Sequences:

>Translated_67_residues
MDNFVELSLEQKFSLQSFEYQVQKMSKEQAQDFLIQLYKQMIIKETMYKQLIKQEWDISKPFAPLDD
>Mature_67_residues
MDNFVELSLEQKFSLQSFEYQVQKMSKEQAQDFLIQLYKQMIIKETMYKQLIKQEWDISKPFAPLDD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8155; Mature: 8155

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNFVELSLEQKFSLQSFEYQVQKMSKEQAQDFLIQLYKQMIIKETMYKQLIKQEWDISK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PFAPLDD
CCCCCCC
>Mature Secondary Structure
MDNFVELSLEQKFSLQSFEYQVQKMSKEQAQDFLIQLYKQMIIKETMYKQLIKQEWDISK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PFAPLDD
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA