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The map label for this gene is cpcG [H]

Identifier: 158340284

GI number: 158340284

Start: 154225

End: 155040

Strand: Reverse

Name: cpcG [H]

Synonym: AM1_C0203

Alternate gene names: 158340284

Gene position: 155040-154225 (Counterclockwise)

Preceding gene: 158340299

Following gene: 158340281

Centisome position: 56.77

GC content: 44.98

Gene sequence:

>816_bases
ATGTCCCTACCCTTATTAGATTACTCCCCAATATCCCAAAATCAGCGTGTCAATGGTTTTGAAGTACCCAGCGATGAACA
GCCAAGGATCTTTACGACTGAAAATCTACCCTCGCCCAACGAAATCACCGCCATCATTGATGCATCCTATCTGCAAATCT
ATCATGAGCAACAGATGTTGGCCGCCAACCGTCAGGCGACTTTAGAATCTCAACTCAAAGCCAGGCAGATTACTGTTAAA
GATTTTATTCGGGGTTTGATCTTATCAGATTCCTTTCGCCGACTGAATTATGATGCCAATAACAACTATCGTTTTGTTGA
GCTTTGTTTTCAGCGCGTATTGGGACGTCAGGTTTACAACGAAAGAGAAACCCTAGCTTGGTCTATTGTTTTAGCTACGA
AAGGACTCCAAGGCTTCATTGACGAGCTGCTTAATACCGATGAATATCTGGAAAATTTTGGGGAAGACACTGTTCCATAT
CAACGACGTCGAATTCTCCCTCAGCAAGAGATAGGAGAATTAACGTTTGCTCACGTTACTCGTTATGGTGAGGAGTTTCG
GGATAGTATTTCTAGAACAAGCCGGTCTTCTAGCGTTCCTCGCCGTTCTAGCGCACCGACTCGTTCTAGCGCACCCAGTC
GCTCCAGTGCACCCAGTCGTTCTAGTACACCTAGTCGCTCTACTAGCTCAGCCAGTTCAATTTCATCAGGTTCATCAGAG
GGATCCGAAAGTTATACTGGCCTTATAGCGGCAATTATAATTGGTCTTGGCGCACTAAGTGGTGTGATAATTGCTTCATT
TGTGGTTGGGTCTTAG

Upstream 100 bases:

>100_bases
AAATACTTGGGTATCGAACTACTTTCTTCAATATTTCATTTACTTGGAATTTTTCCACTAATAAAGTATTTTGGCCATTT
TTTGTCAAGGAGTTTTATAT

Downstream 100 bases:

>100_bases
TTTTTAATTAACGAGGAGTTGCTTACTCAGAGCCACTTCTAATTAGGTATAAAGCTTCTTTCACATAAGGGGAATAGGGT
TGTCTATCAGACAACCCTCA

Product: phycobilisome rod-core linker polypeptide; CpcG

Products: NA

Alternate protein names: L-RC 28.5 [H]

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MSLPLLDYSPISQNQRVNGFEVPSDEQPRIFTTENLPSPNEITAIIDASYLQIYHEQQMLAANRQATLESQLKARQITVK
DFIRGLILSDSFRRLNYDANNNYRFVELCFQRVLGRQVYNERETLAWSIVLATKGLQGFIDELLNTDEYLENFGEDTVPY
QRRRILPQQEIGELTFAHVTRYGEEFRDSISRTSRSSSVPRRSSAPTRSSAPSRSSAPSRSSTPSRSTSSASSISSGSSE
GSESYTGLIAAIIIGLGALSGVIIASFVVGS

Sequences:

>Translated_271_residues
MSLPLLDYSPISQNQRVNGFEVPSDEQPRIFTTENLPSPNEITAIIDASYLQIYHEQQMLAANRQATLESQLKARQITVK
DFIRGLILSDSFRRLNYDANNNYRFVELCFQRVLGRQVYNERETLAWSIVLATKGLQGFIDELLNTDEYLENFGEDTVPY
QRRRILPQQEIGELTFAHVTRYGEEFRDSISRTSRSSSVPRRSSAPTRSSAPSRSSAPSRSSTPSRSTSSASSISSGSSE
GSESYTGLIAAIIIGLGALSGVIIASFVVGS
>Mature_270_residues
SLPLLDYSPISQNQRVNGFEVPSDEQPRIFTTENLPSPNEITAIIDASYLQIYHEQQMLAANRQATLESQLKARQITVKD
FIRGLILSDSFRRLNYDANNNYRFVELCFQRVLGRQVYNERETLAWSIVLATKGLQGFIDELLNTDEYLENFGEDTVPYQ
RRRILPQQEIGELTFAHVTRYGEEFRDSISRTSRSSSVPRRSSAPTRSSAPSRSSAPSRSSTPSRSTSSASSISSGSSEG
SESYTGLIAAIIIGLGALSGVIIASFVVGS

Specific function: Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PBS-linker domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001297
- InterPro:   IPR016470
- ProDom:   PD000852 [H]

Pfam domain/function: PF00427 PBS_linker_poly [H]

EC number: NA

Molecular weight: Translated: 30090; Mature: 29959

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPLLDYSPISQNQRVNGFEVPSDEQPRIFTTENLPSPNEITAIIDASYLQIYHEQQML
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEHHHHHHHHHHHHHHH
AANRQATLESQLKARQITVKDFIRGLILSDSFRRLNYDANNNYRFVELCFQRVLGRQVYN
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHC
ERETLAWSIVLATKGLQGFIDELLNTDEYLENFGEDTVPYQRRRILPQQEIGELTFAHVT
CHHHHEEEHHHHHCCHHHHHHHHHCHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHH
RYGEEFRDSISRTSRSSSVPRRSSAPTRSSAPSRSSAPSRSSTPSRSTSSASSISSGSSE
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC
GSESYTGLIAAIIIGLGALSGVIIASFVVGS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLPLLDYSPISQNQRVNGFEVPSDEQPRIFTTENLPSPNEITAIIDASYLQIYHEQQML
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEHHHHHHHHHHHHHHH
AANRQATLESQLKARQITVKDFIRGLILSDSFRRLNYDANNNYRFVELCFQRVLGRQVYN
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHC
ERETLAWSIVLATKGLQGFIDELLNTDEYLENFGEDTVPYQRRRILPQQEIGELTFAHVT
CHHHHEEEHHHHHCCHHHHHHHHHCHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHH
RYGEEFRDSISRTSRSSSVPRRSSAPTRSSAPSRSSAPSRSSTPSRSTSSASSISSGSSE
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC
GSESYTGLIAAIIIGLGALSGVIIASFVVGS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2164365 [H]