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The map label for this gene is traC [H]

Identifier: 148243784

GI number: 148243784

Start: 178677

End: 179702

Strand: Reverse

Name: traC [H]

Synonym: Acry_3267

Alternate gene names: 148243784

Gene position: 179702-178677 (Counterclockwise)

Preceding gene: 148243785

Following gene: 148243780

Centisome position: 88.27

GC content: 63.16

Gene sequence:

>1026_bases
TTGAGGAAACGGCACTCGATGAGGCGGATGCCTGGGAGTCCAATGCGGACGTGGAGAATACCAACGAGGCCACCCATGGC
CGGTGATTATGCCCAGACGGTTGCCGCCTCGATCGTCAAGCAGTTGGAGGATGGCACCGCACCCTGGGTGAAGCCGTGGG
AGCCCAGCGGCCTCCGGTTCATTCCTTACAACGCGATCACCGGCAAGGATTATCAGGGCGGCAACGCAATCTGGCTGATG
GCAGTGGCCGAGATGAAGGGCTACAGCGATCCGCGCTGGACCACCTACAAGCAGGCGCAGAGCCTCGATGCCCAGGTGAT
GAAGGGCGAAAAGGGCACGCTGATCCAGTATTTCAAGAAGTTTGACCGGGTGCCGGTGAAGGACGAGCAGGGCCGGCCGG
TGAAGGATGCCGAAGGTAATCAGGTTTACCGCAGCGTCGAGCTGGAACGGCCGCGGGTGTTTTCGGCCGTGGTGTTCAAT
GCCGAGCAGATCGCCGGCATGCCGAAGATCGAGGCCCGGCCCGCCCTGGCGGAATGGGAACGCCACGCCGCAGCCGAGCA
GATCATGAGCAATTCCGGGGTGCCGATCATCTACCGGCCCGGCGACCGGGCCTTTTACACCCTGGCGCAAGACCGGGTCA
CGATGCCGGAGCGCGAGCAATTCAAGACGGCGGATCGGTTTTACAGCACGGCGCTGCATGAGCTGGGGCATAATGCCGCG
ATCCGGATTATGCCGCATGGCCTCCGCTGGAGGCCGGATAGCCCGGCATTGGCCATGCGGCTGTTCGGCATAATCAGAGC
CCTTCCAGGAACGCGAGGAGTTGATCGTCGGGCCGGAACCGGCCCGACGGCGTGGCTGGAGCGGCGACGCGAGCGAGCGC
CTTTTCCTTCATCCGCATGTCGGCATGGATGTAGATTTGGGTGGTCTCGACGTTCTCGTGACCAAGCCAGAGCGCGATCA
CCGCAGGATCAACGCCGTGGTGGAGCAGGTCCATCGCCGTGCTGTGGCGCAGCGTATGTGGCGTGA

Upstream 100 bases:

>100_bases
GACCCGAAGCAACCAATCATCTCGCGCGACCTAGCCGATCTGATGCGGCCGGGCGTCATGGTGGAGATCGACCCGGCTGA
GGTCGAGCAGCTGGGACTGG

Downstream 100 bases:

>100_bases
CCTGTTTCGTGCCGATGCTCGGGCACGCGCGCGACGCCGTGAGGCAGTGCTTGCGGACCAGATGCTCAAGAGCGTCACGG
CTCAGCCGTTCGCCCCGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Replication primase [H]

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MRKRHSMRRMPGSPMRTWRIPTRPPMAGDYAQTVAASIVKQLEDGTAPWVKPWEPSGLRFIPYNAITGKDYQGGNAIWLM
AVAEMKGYSDPRWTTYKQAQSLDAQVMKGEKGTLIQYFKKFDRVPVKDEQGRPVKDAEGNQVYRSVELERPRVFSAVVFN
AEQIAGMPKIEARPALAEWERHAAAEQIMSNSGVPIIYRPGDRAFYTLAQDRVTMPEREQFKTADRFYSTALHELGHNAA
IRIMPHGLRWRPDSPALAMRLFGIIRALPGTRGVDRRAGTGPTAWLERRRERAPFPSSACRHGCRFGWSRRSRDQARARS
PQDQRRGGAGPSPCCGAAYVA

Sequences:

>Translated_341_residues
MRKRHSMRRMPGSPMRTWRIPTRPPMAGDYAQTVAASIVKQLEDGTAPWVKPWEPSGLRFIPYNAITGKDYQGGNAIWLM
AVAEMKGYSDPRWTTYKQAQSLDAQVMKGEKGTLIQYFKKFDRVPVKDEQGRPVKDAEGNQVYRSVELERPRVFSAVVFN
AEQIAGMPKIEARPALAEWERHAAAEQIMSNSGVPIIYRPGDRAFYTLAQDRVTMPEREQFKTADRFYSTALHELGHNAA
IRIMPHGLRWRPDSPALAMRLFGIIRALPGTRGVDRRAGTGPTAWLERRRERAPFPSSACRHGCRFGWSRRSRDQARARS
PQDQRRGGAGPSPCCGAAYVA
>Mature_341_residues
MRKRHSMRRMPGSPMRTWRIPTRPPMAGDYAQTVAASIVKQLEDGTAPWVKPWEPSGLRFIPYNAITGKDYQGGNAIWLM
AVAEMKGYSDPRWTTYKQAQSLDAQVMKGEKGTLIQYFKKFDRVPVKDEQGRPVKDAEGNQVYRSVELERPRVFSAVVFN
AEQIAGMPKIEARPALAEWERHAAAEQIMSNSGVPIIYRPGDRAFYTLAQDRVTMPEREQFKTADRFYSTALHELGHNAA
IRIMPHGLRWRPDSPALAMRLFGIIRALPGTRGVDRRAGTGPTAWLERRRERAPFPSSACRHGCRFGWSRRSRDQARARS
PQDQRRGGAGPSPCCGAAYVA

Specific function: Required for autonomous replication in E.coli. Transferred into the recipient cell during bacterial conjugation. Catalyzes the synthesis of short oligoribonucleotide primers with CpA or pCpA at their 5'-termini on a single stranded template DNA [H]

COG id: COG4227

COG function: function code L; Antirestriction protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013610
- InterPro:   IPR006171 [H]

Pfam domain/function: PF08401 DUF1738; PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 38512; Mature: 38512

Theoretical pI: Translated: 10.88; Mature: 10.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKRHSMRRMPGSPMRTWRIPTRPPMAGDYAQTVAASIVKQLEDGTAPWVKPWEPSGLRF
CCCHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE
IPYNAITGKDYQGGNAIWLMAVAEMKGYSDPRWTTYKQAQSLDAQVMKGEKGTLIQYFKK
EECCCCCCCCCCCCCEEEEEEEHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH
FDRVPVKDEQGRPVKDAEGNQVYRSVELERPRVFSAVVFNAEQIAGMPKIEARPALAEWE
HCCCCCCCCCCCCCCCCCCCCEEHHHCCCCCHHHHHHHHCHHHHCCCCCCCCCCCHHHHH
RHAAAEQIMSNSGVPIIYRPGDRAFYTLAQDRVTMPEREQFKTADRFYSTALHELGHNAA
HHHHHHHHHCCCCCEEEEECCCCEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCE
IRIMPHGLRWRPDSPALAMRLFGIIRALPGTRGVDRRAGTGPTAWLERRRERAPFPSSAC
EEEECCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHH
RHGCRFGWSRRSRDQARARSPQDQRRGGAGPSPCCGAAYVA
HHHHHCCCCCCCHHHHHHCCCHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRKRHSMRRMPGSPMRTWRIPTRPPMAGDYAQTVAASIVKQLEDGTAPWVKPWEPSGLRF
CCCHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE
IPYNAITGKDYQGGNAIWLMAVAEMKGYSDPRWTTYKQAQSLDAQVMKGEKGTLIQYFKK
EECCCCCCCCCCCCCEEEEEEEHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH
FDRVPVKDEQGRPVKDAEGNQVYRSVELERPRVFSAVVFNAEQIAGMPKIEARPALAEWE
HCCCCCCCCCCCCCCCCCCCCEEHHHCCCCCHHHHHHHHCHHHHCCCCCCCCCCCHHHHH
RHAAAEQIMSNSGVPIIYRPGDRAFYTLAQDRVTMPEREQFKTADRFYSTALHELGHNAA
HHHHHHHHHCCCCCEEEEECCCCEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCE
IRIMPHGLRWRPDSPALAMRLFGIIRALPGTRGVDRRAGTGPTAWLERRRERAPFPSSAC
EEEECCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHH
RHGCRFGWSRRSRDQARARSPQDQRRGGAGPSPCCGAAYVA
HHHHHCCCCCCCHHHHHHCCCHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1818755 [H]