Definition | Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete sequence. |
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Accession | NC_009350 |
Length | 155,098 |
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The map label for this gene is ascP [H]
Identifier: 145301461
GI number: 145301461
Start: 75061
End: 76368
Strand: Direct
Name: ascP [H]
Synonym: ASA_P5G078
Alternate gene names: 145301461
Gene position: 75061-76368 (Clockwise)
Preceding gene: 145301460
Following gene: 145301462
Centisome position: 48.4
GC content: 56.96
Gene sequence:
>1308_bases ATGAACCGAATCCTCCCGATACAGGGCACAGTGACAGCCCGGGGCGATACCCAGATGGCTGAAGCCAATCAATCGCAACA ACAGCGTTTCGAGCAGGCAATGCGGCTGGAGCAGAGCCTCAAAGAACGCGGCCACAACCCGCAGCCTGAGCGAGTGGCAG CAACAGATATCTCAGCTAAAGAAAGGCACGACAAACCCACTTTTGCTGCTCATTCTGGCGCTGAACTGCTCGACACAAAC CCGATAGCGGTAACGGACAACACACCACTCGTGCCACCAACCATTGCACCAATAAATGCAATAACACTGACGCTTGATAA GACTCGCACATCTAGTCAACAAACCAAGCACACACAGTTCACTGCTCAGGACAACGATCAGCGCCCCCCCATACTGACGA TAACTGCGAATCCGGTCGCACTGAGGCCAACAAATACCAGCAGCGATGTAATTTCGACGCACCTCAACGAGTCTCTGCCG CTCACCGAGGGGGTTGGGAGCAAGCTCACTGCGCAACCGGAGAGCATGCAAAGCGCTCCAAAGACAAGCTTGCTCGAAAG CTCTGCAGATTTGAGGCTAACCGCCATTATTACCCAGCCCTATGGTCATGTTACCCAAGCCACGCTGACTGAAAACGAGT GGCTTGATGAACAACATCCAGTCATTGAGGCTCATAAGGCAGCTAACGCAAACGCGATAGATGTCATCACTAATACCACG CCACATCTACTGCCATTGGCAACGGACAACGAGGCGATCCCACCCAAACTTGCCTCCTCCCTGCGAACTGATATCGGTGA ACTGGCCGCTCAGCTTGACGCAGAGATACAACAGCTGACGGCAATAAAGCCAGTCACTACAGGTGAAACGGCCCCCAAAG GCGAGCTCTTTGCCAACCCGGCCATATGGGTCGCCCCCCTTGCTGTGACCCCCGGGGATCTGCAGCTCGCCCGGTTGGCA CCTGCCGAAAGTAATCGGGAGCTGTGTCAGCTGCTGGAGCGGCTGGCAGTTGATATCTATCAGGAGCTGGGCCGCCCGGA GCGTCCGCCGCTGCTGCGCCTGACGTTGCCACAGCTGGGCGATCTCTCCATTCGCATCGCCCACCACAATGGCGAGTTGC AGATCGAGATCCTCGCCACGGCGCAAGGAGAGCTGCTGCTCAATCAGGGGCGCAGCGATCTGGTCGACCGCCTGCAACGG CTCTATCCCGGCGAGCGGGTCGCCCTCGATCTCTTTAACCAGGCCGACAGTGAGCGAGGCTCGCGCCATAAACGATCCAT CTACGAAGAGTGGGATGCCGACGCATGA
Upstream 100 bases:
>100_bases ACTACACCGTCAGAAGCAGGCCTCACAGCAAGCCCTGCGTGACTACAACGAAGAGCAGGAACAGGAAGAGTTCCGCCAGC AGATCAGGATGTAACGAGTC
Downstream 100 bases:
>100_bases CACCGATTGCCCTCACCTCCGCCTCGCTGGCGGAGTTGACTTTACAGCAGACCCTGAGCCAGTACCGCCAGCACTTTGGC TGGAGTGGCGGCGAGCTTCT
Product: AscP protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MNRILPIQGTVTARGDTQMAEANQSQQQRFEQAMRLEQSLKERGHNPQPERVAATDISAKERHDKPTFAAHSGAELLDTN PIAVTDNTPLVPPTIAPINAITLTLDKTRTSSQQTKHTQFTAQDNDQRPPILTITANPVALRPTNTSSDVISTHLNESLP LTEGVGSKLTAQPESMQSAPKTSLLESSADLRLTAIITQPYGHVTQATLTENEWLDEQHPVIEAHKAANANAIDVITNTT PHLLPLATDNEAIPPKLASSLRTDIGELAAQLDAEIQQLTAIKPVTTGETAPKGELFANPAIWVAPLAVTPGDLQLARLA PAESNRELCQLLERLAVDIYQELGRPERPPLLRLTLPQLGDLSIRIAHHNGELQIEILATAQGELLLNQGRSDLVDRLQR LYPGERVALDLFNQADSERGSRHKRSIYEEWDADA
Sequences:
>Translated_435_residues MNRILPIQGTVTARGDTQMAEANQSQQQRFEQAMRLEQSLKERGHNPQPERVAATDISAKERHDKPTFAAHSGAELLDTN PIAVTDNTPLVPPTIAPINAITLTLDKTRTSSQQTKHTQFTAQDNDQRPPILTITANPVALRPTNTSSDVISTHLNESLP LTEGVGSKLTAQPESMQSAPKTSLLESSADLRLTAIITQPYGHVTQATLTENEWLDEQHPVIEAHKAANANAIDVITNTT PHLLPLATDNEAIPPKLASSLRTDIGELAAQLDAEIQQLTAIKPVTTGETAPKGELFANPAIWVAPLAVTPGDLQLARLA PAESNRELCQLLERLAVDIYQELGRPERPPLLRLTLPQLGDLSIRIAHHNGELQIEILATAQGELLLNQGRSDLVDRLQR LYPGERVALDLFNQADSERGSRHKRSIYEEWDADA >Mature_435_residues MNRILPIQGTVTARGDTQMAEANQSQQQRFEQAMRLEQSLKERGHNPQPERVAATDISAKERHDKPTFAAHSGAELLDTN PIAVTDNTPLVPPTIAPINAITLTLDKTRTSSQQTKHTQFTAQDNDQRPPILTITANPVALRPTNTSSDVISTHLNESLP LTEGVGSKLTAQPESMQSAPKTSLLESSADLRLTAIITQPYGHVTQATLTENEWLDEQHPVIEAHKAANANAIDVITNTT PHLLPLATDNEAIPPKLASSLRTDIGELAAQLDAEIQQLTAIKPVTTGETAPKGELFANPAIWVAPLAVTPGDLQLARLA PAESNRELCQLLERLAVDIYQELGRPERPPLLRLTLPQLGDLSIRIAHHNGELQIEILATAQGELLLNQGRSDLVDRLQR LYPGERVALDLFNQADSERGSRHKRSIYEEWDADA
Specific function: Component of the yop secretion machinery [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the spaN family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021136 - InterPro: IPR013354 [H]
Pfam domain/function: PF02120 Flg_hook [H]
EC number: NA
Molecular weight: Translated: 47575; Mature: 47575
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRILPIQGTVTARGDTQMAEANQSQQQRFEQAMRLEQSLKERGHNPQPERVAATDISAK CCCEEECCCEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHH ERHDKPTFAAHSGAELLDTNPIAVTDNTPLVPPTIAPINAITLTLDKTRTSSQQTKHTQF HHCCCCCEECCCCCHHCCCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHCCEE TAQDNDQRPPILTITANPVALRPTNTSSDVISTHLNESLPLTEGVGSKLTAQPESMQSAP EECCCCCCCCEEEEECCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCC KTSLLESSADLRLTAIITQPYGHVTQATLTENEWLDEQHPVIEAHKAANANAIDVITNTT CHHHHHCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCCCCHHHHHCCCCCEEEEEECCC PHLLPLATDNEAIPPKLASSLRTDIGELAAQLDAEIQQLTAIKPVTTGETAPKGELFANP CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCC AIWVAPLAVTPGDLQLARLAPAESNRELCQLLERLAVDIYQELGRPERPPLLRLTLPQLG CEEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCC DLSIRIAHHNGELQIEILATAQGELLLNQGRSDLVDRLQRLYPGERVALDLFNQADSERG CEEEEEEECCCEEEEEEEEECCCCEEECCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHC SRHKRSIYEEWDADA HHHHHHHHHHCCCCC >Mature Secondary Structure MNRILPIQGTVTARGDTQMAEANQSQQQRFEQAMRLEQSLKERGHNPQPERVAATDISAK CCCEEECCCEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHH ERHDKPTFAAHSGAELLDTNPIAVTDNTPLVPPTIAPINAITLTLDKTRTSSQQTKHTQF HHCCCCCEECCCCCHHCCCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHCCEE TAQDNDQRPPILTITANPVALRPTNTSSDVISTHLNESLPLTEGVGSKLTAQPESMQSAP EECCCCCCCCEEEEECCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCC KTSLLESSADLRLTAIITQPYGHVTQATLTENEWLDEQHPVIEAHKAANANAIDVITNTT CHHHHHCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCCCCHHHHHCCCCCEEEEEECCC PHLLPLATDNEAIPPKLASSLRTDIGELAAQLDAEIQQLTAIKPVTTGETAPKGELFANP CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCC AIWVAPLAVTPGDLQLARLAPAESNRELCQLLERLAVDIYQELGRPERPPLLRLTLPQLG CEEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCC DLSIRIAHHNGELQIEILATAQGELLLNQGRSDLVDRLQRLYPGERVALDLFNQADSERG CEEEEEEECCCEEEEEEEEECCCCEEECCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHC SRHKRSIYEEWDADA HHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9746557; 9748454; 11586360 [H]