Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
---|---|
Accession | NC_009079 |
Length | 2,352,693 |
Click here to switch to the map view.
The map label for this gene is insK [C]
Identifier: 126446981
GI number: 126446981
Start: 1986962
End: 1987795
Strand: Direct
Name: insK [C]
Synonym: BMA10247_A2049
Alternate gene names: 126446981
Gene position: 1986962-1987795 (Clockwise)
Preceding gene: 126447836
Following gene: 126447234
Centisome position: 84.45
GC content: 61.75
Gene sequence:
>834_bases GTGTTGGCGATTCGGGAGAAGGTCAACATCTCCGAGCGCCGCGCCTGCCGGCTTGTCGGGCTTTCTCGCAGCGTGCTGCA TTACGACGCGAAGCCGGACCACGAGAATGAGGTGCTCGCGGCGCGTCTGGTGAAGTTGGCGCACGAACGTCGTCGATTCG GCTACCGCCGACTGCACGCCCTGGTGGAACGCGAAGGCACGCACGCCAATCACAAGCGCATCTATCGCCTGTACCGTGAG GCAGGGCTGGCTGTGCGGCGCCGTCGCAAGCGCCACGGCGTCATGATTGAGCGCGAGCAACTGGCATTGCCGGGCGCACC CAACGAGGTATGGTCAATCGATTTCGTGATGGATGCGCTTTCCAACGGCCGGCGCGTGAAGTGCCTGACCGTCGTCGACG ATTTCACGAAAGAGGCTGTCGACATCGTCGTCGACCATGGCATCTCAGGTTTGTATGTCGCTCGGGCATTGGACCGTGCA GCTCGCTTCCGTGGCTATCCCAAGGCGGTGCGAACAGACCAGGGACCCGAATTTACGAGCCGCGCGCTTGACCAGTGGGC GTATGCGAACGGCGTCACGCTGAAGTTGATTCAGGCGGGCAAGCCCACGCAGAATGCGTACATCGAATCGTTCAACGGCA AGTTCCGCGACGAATGCCTTAACGAGCACTGGTTCACGACGCTCGCGCACGCTCGGGCAGTCATCGCGGCATGGCGTCAG GACTACAACGAGCAAAGGCCGCACAGCGCACTGAACTACCTTGCGCCGTCAGAGTTTGCGGCGAAACATCGGGCAACCGC GGACGCTCCTGCCGCTTTCCAGGAGTTGGTTTAA
Upstream 100 bases:
>100_bases CCCGACTGAAGAAACTGCTGGCCGAAGCAATGCTCGATATGGAAGCGTTGAAGGTTGTCGTCAAGGGAAAGCCCTGAGCC CGCAAGCCAAACGCGAAGCA
Downstream 100 bases:
>100_bases AGGGACTTTGCTAGAAGCCCATTGGCCCTATCGAAGGGGGCAGGTCAGGATCAGGGCTGCCAATACACGAGCACGCGCTT TCTCGCCGAGCTGCGCGCCC
Product: IS407A, transposase OrfB
Products: NA
Alternate protein names: ORF1 [H]
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MLAIREKVNISERRACRLVGLSRSVLHYDAKPDHENEVLAARLVKLAHERRRFGYRRLHALVEREGTHANHKRIYRLYRE AGLAVRRRRKRHGVMIEREQLALPGAPNEVWSIDFVMDALSNGRRVKCLTVVDDFTKEAVDIVVDHGISGLYVARALDRA ARFRGYPKAVRTDQGPEFTSRALDQWAYANGVTLKLIQAGKPTQNAYIESFNGKFRDECLNEHWFTTLAHARAVIAAWRQ DYNEQRPHSALNYLAPSEFAAKHRATADAPAAFQELV
Sequences:
>Translated_277_residues MLAIREKVNISERRACRLVGLSRSVLHYDAKPDHENEVLAARLVKLAHERRRFGYRRLHALVEREGTHANHKRIYRLYRE AGLAVRRRRKRHGVMIEREQLALPGAPNEVWSIDFVMDALSNGRRVKCLTVVDDFTKEAVDIVVDHGISGLYVARALDRA ARFRGYPKAVRTDQGPEFTSRALDQWAYANGVTLKLIQAGKPTQNAYIESFNGKFRDECLNEHWFTTLAHARAVIAAWRQ DYNEQRPHSALNYLAPSEFAAKHRATADAPAAFQELV >Mature_277_residues MLAIREKVNISERRACRLVGLSRSVLHYDAKPDHENEVLAARLVKLAHERRRFGYRRLHALVEREGTHANHKRIYRLYRE AGLAVRRRRKRHGVMIEREQLALPGAPNEVWSIDFVMDALSNGRRVKCLTVVDDFTKEAVDIVVDHGISGLYVARALDRA ARFRGYPKAVRTDQGPEFTSRALDQWAYANGVTLKLIQAGKPTQNAYIESFNGKFRDECLNEHWFTTLAHARAVIAAWRQ DYNEQRPHSALNYLAPSEFAAKHRATADAPAAFQELV
Specific function: Involved in the transposition of the insertion sequence is150 [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 integrase catalytic domain [H]
Homologues:
Organism=Escherichia coli, GI1789981, Length=262, Percent_Identity=27.0992366412214, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1786462, Length=266, Percent_Identity=23.6842105263158, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001584 - InterPro: IPR012337 [H]
Pfam domain/function: PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 31707; Mature: 31707
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: PS50994 INTEGRASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAIREKVNISERRACRLVGLSRSVLHYDAKPDHENEVLAARLVKLAHERRRFGYRRLHA CCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LVEREGTHANHKRIYRLYREAGLAVRRRRKRHGVMIEREQLALPGAPNEVWSIDFVMDAL HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCCCCCCCHHHHHHHHHHHH SNGRRVKCLTVVDDFTKEAVDIVVDHGISGLYVARALDRAARFRGYPKAVRTDQGPEFTS CCCCEEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHH RALDQWAYANGVTLKLIQAGKPTQNAYIESFNGKFRDECLNEHWFTTLAHARAVIAAWRQ HHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH DYNEQRPHSALNYLAPSEFAAKHRATADAPAAFQELV HHHHCCCHHHHHHCCCHHHHHHHCCCCCCHHHHHHCC >Mature Secondary Structure MLAIREKVNISERRACRLVGLSRSVLHYDAKPDHENEVLAARLVKLAHERRRFGYRRLHA CCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LVEREGTHANHKRIYRLYREAGLAVRRRRKRHGVMIEREQLALPGAPNEVWSIDFVMDAL HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCCCCCCCHHHHHHHHHHHH SNGRRVKCLTVVDDFTKEAVDIVVDHGISGLYVARALDRAARFRGYPKAVRTDQGPEFTS CCCCEEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHH RALDQWAYANGVTLKLIQAGKPTQNAYIESFNGKFRDECLNEHWFTTLAHARAVIAAWRQ HHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH DYNEQRPHSALNYLAPSEFAAKHRATADAPAAFQELV HHHHCCCHHHHHHCCCHHHHHHHCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1718819 [H]