Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185445
Identifier: 159185445
GI number: 159185445
Start: 2658727
End: 2659230
Strand: Reverse
Name: 159185445
Synonym: Atu8182
Alternate gene names: NA
Gene position: 2659230-2658727 (Counterclockwise)
Preceding gene: 159185321
Following gene: 159185320
Centisome position: 93.58
GC content: 56.55
Gene sequence:
>504_bases ATGTTTGTAAGAAGTGTAGCAACCGCAGCGGCCATTTTGCTGACCAGCGTCGGCTTAGCATCTGCACAGTCGCCCACGCG CATCCAGCAGTTCAATGCCTGGGGTGCCTATTCGTACAAATCGGGCAACAGCACCGTCTGCTACGTTCTTTCCATCCCCA CCTCCAAGGAACCGGCAAGCGTTGACCACGGCGATATCTTCTTCATCGTCTCGCAGCGTCCTGGCCAGAACATCTCCTAC GAGCCGCAGGCGATGGTTGGCTATACGCTGAAGCAGGGCTCCAAGGTCAATGTGACGATCGACAACAAGAACTTCGTCAT GTTCACCAAGGACAAGGCTGCCTGGGTTGAAAACGCCGCTGAAGAGCCGGCTCTCGTCGCCGCCATGAAGGGCGGCAAGT CGATGACCGTAAAGGCGGTTTCCGGCCGCGGCACTGCGACGTCCTATTCCTATTCGCTGTCGGGCATTTCGGCTGCTTTC AAACAGATCGAGAGCTGCAAGTAA
Upstream 100 bases:
>100_bases CAATGAGAAAAGACGATCCGCACCTGAACGTGGCCGATCCAGAATCTGGGCTCGCCGCTGCTTCGGGCCAATGGAAGACA ATAACCCGGCAGGAAATTCT
Downstream 100 bases:
>100_bases TCCTGACGCTTTGTCAGATTTGTGATTGGCCGGTCCTCGACCGGCCATTTGCGTTTTTGCCAGTTTGATGCTAAAGGCGC GGCAACATTGACAGGCGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MFVRSVATAAAILLTSVGLASAQSPTRIQQFNAWGAYSYKSGNSTVCYVLSIPTSKEPASVDHGDIFFIVSQRPGQNISY EPQAMVGYTLKQGSKVNVTIDNKNFVMFTKDKAAWVENAAEEPALVAAMKGGKSMTVKAVSGRGTATSYSYSLSGISAAF KQIESCK
Sequences:
>Translated_167_residues MFVRSVATAAAILLTSVGLASAQSPTRIQQFNAWGAYSYKSGNSTVCYVLSIPTSKEPASVDHGDIFFIVSQRPGQNISY EPQAMVGYTLKQGSKVNVTIDNKNFVMFTKDKAAWVENAAEEPALVAAMKGGKSMTVKAVSGRGTATSYSYSLSGISAAF KQIESCK >Mature_167_residues MFVRSVATAAAILLTSVGLASAQSPTRIQQFNAWGAYSYKSGNSTVCYVLSIPTSKEPASVDHGDIFFIVSQRPGQNISY EPQAMVGYTLKQGSKVNVTIDNKNFVMFTKDKAAWVENAAEEPALVAAMKGGKSMTVKAVSGRGTATSYSYSLSGISAAF KQIESCK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17782; Mature: 17782
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVRSVATAAAILLTSVGLASAQSPTRIQQFNAWGAYSYKSGNSTVCYVLSIPTSKEPAS CCCHHHHHHHHHHHHHCCCCCCCCCCHHEEECCCCCEEEECCCCEEEEEEECCCCCCCCC VDHGDIFFIVSQRPGQNISYEPQAMVGYTLKQGSKVNVTIDNKNFVMFTKDKAAWVENAA CCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEECCCEEEEEECCCHHHHHCCC EEPALVAAMKGGKSMTVKAVSGRGTATSYSYSLSGISAAFKQIESCK CCCEEEEEECCCCEEEEEEECCCCCEEEEEEEHHHHHHHHHHHHCCC >Mature Secondary Structure MFVRSVATAAAILLTSVGLASAQSPTRIQQFNAWGAYSYKSGNSTVCYVLSIPTSKEPAS CCCHHHHHHHHHHHHHCCCCCCCCCCHHEEECCCCCEEEECCCCEEEEEEECCCCCCCCC VDHGDIFFIVSQRPGQNISYEPQAMVGYTLKQGSKVNVTIDNKNFVMFTKDKAAWVENAA CCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEECCCEEEEEECCCHHHHHCCC EEPALVAAMKGGKSMTVKAVSGRGTATSYSYSLSGISAAFKQIESCK CCCEEEEEECCCCEEEEEEECCCCCEEEEEEEHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA