Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185432
Identifier: 159185432
GI number: 159185432
Start: 1205899
End: 1206234
Strand: Reverse
Name: 159185432
Synonym: Atu8149
Alternate gene names: NA
Gene position: 1206234-1205899 (Counterclockwise)
Preceding gene: 15888548
Following gene: 15888546
Centisome position: 42.45
GC content: 60.71
Gene sequence:
>336_bases ATGACAAACAACCTCAATATGGCGACCCGCAGTGCAGCCCGCAGCAAGACGAGGATCTTCGCGACGGTGTTTTATTTCAG CCAGTCCACCCGCGGCCGTGTGGTTGATCTTTCCGCCACCGGCATGGCTCTCGAACTGGACGGACCTTTCGCCGCCGCCA AGGGCAGCCGGGTCAAGGTGCAGAGCGACGATCTGGGCTTCATCGAGGGTGTGGTGCAGTGGCAGCACCAGAACCGCCTC GGCCTGCAGCTGAAGCTTTCCACCAACACGCTGGCGCAACTCACCTCCTATTTCCGCTTCTTCCACGAAGAAGTGAAACC GACCCTCGCCCGCTGA
Upstream 100 bases:
>100_bases ATCGGCAATTACCTGCAATTTTAACTGAAGAACTAAATGGCTCTCAAGCTTTCCGCAGCATGATGCATGGTATCGGAAAC AAATTGATTTGAGCAGCAAC
Downstream 100 bases:
>100_bases TCGCTTGGTGCCGAAACCAGAATGCGCCGACATGTCCGTCGCGCTTCCCTGACAAAAAATTTATCAAACGGTTGAAAACA GGCCCGACTGTCACGGGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MTNNLNMATRSAARSKTRIFATVFYFSQSTRGRVVDLSATGMALELDGPFAAAKGSRVKVQSDDLGFIEGVVQWQHQNRL GLQLKLSTNTLAQLTSYFRFFHEEVKPTLAR
Sequences:
>Translated_111_residues MTNNLNMATRSAARSKTRIFATVFYFSQSTRGRVVDLSATGMALELDGPFAAAKGSRVKVQSDDLGFIEGVVQWQHQNRL GLQLKLSTNTLAQLTSYFRFFHEEVKPTLAR >Mature_110_residues TNNLNMATRSAARSKTRIFATVFYFSQSTRGRVVDLSATGMALELDGPFAAAKGSRVKVQSDDLGFIEGVVQWQHQNRLG LQLKLSTNTLAQLTSYFRFFHEEVKPTLAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12414; Mature: 12283
Theoretical pI: Translated: 10.97; Mature: 10.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNNLNMATRSAARSKTRIFATVFYFSQSTRGRVVDLSATGMALELDGPFAAAKGSRVKV CCCCCCCHHHHHHCCCCEEEEEEEEECCCCCCEEEEEECCCEEEEECCCEECCCCCEEEE QSDDLGFIEGVVQWQHQNRLGLQLKLSTNTLAQLTSYFRFFHEEVKPTLAR ECCCCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TNNLNMATRSAARSKTRIFATVFYFSQSTRGRVVDLSATGMALELDGPFAAAKGSRVKV CCCCCCHHHHHHCCCCEEEEEEEEECCCCCCEEEEEECCCEEEEECCCEECCCCCEEEE QSDDLGFIEGVVQWQHQNRLGLQLKLSTNTLAQLTSYFRFFHEEVKPTLAR ECCCCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA