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The map label for this gene is glcD [H]

Identifier: 159185356

GI number: 159185356

Start: 2735603

End: 2737045

Strand: Direct

Name: glcD [H]

Synonym: Atu2739

Alternate gene names: 159185356

Gene position: 2735603-2737045 (Clockwise)

Preceding gene: 15889983

Following gene: 15889989

Centisome position: 96.27

GC content: 59.94

Gene sequence:

>1443_bases
GTGGAATTGAGCGAACACGATATCGGGGAATTGCGGTTCTCGTTGAAGAACAGGCTGGGTGAGGCTCTACTGTTGACCTC
TCAGGAAGACATGCTGCGTTATTGCCGCGACTGGCACGGCGACGTCACCAGCTCGGCCGTGGCCGTCATCCGCCCCCGCT
CAACCAAGGAAGTGTCCGATACGGTGATCGCCTGCGCCGAACTCGGCCTCGCCATCATTCCCCAGGGCGGAAATACCGGG
CTGGTGCTCGGCGGCATTCCCGATGCGCCCAAACATCAGGTGGTGCTAAGCCTTGAGCGTATGAACGCGATCCGCACCAT
AGACAGCGATGATTTTTCGGCCGTAGTCGAAGCCGGCTGCATCCTCTCGGAATTCAAGGATGCAGTTCAGGACAAGGGCA
TGTTTTTCCCGCTGTCGCTCGGCGCGCAGGGCAGCTGCCGCATTGGCGGCAACGTCTCCACCAATGCCGGCGGCATCAAT
GTCCTGCGTTATGGCATGACCCGCGAACTGGTTTTGGGTCTTGAAGTGGTCCTGCCGGATGGCACCATCTGGAATGGCCT
GTCGACCCTGCGCAAAGACAATCGCGGCATCGACCTGAAGCAGCTTTTCATCGGTGCGGAAGGAACCCTCGGCATCATCA
CCGCGGTTGCCGTCAAACTTTACCCCAATCCCGAACATGTCGAGACGGCGCTGCTCGGCCTCAATTCGCTTGATGACGCC
ATCAAGCTTTACCGCCGCGCCCGCCGCGAATGCTGCGACCTCATGTCCGCATTCGAATTCATGCCGCCCGTCGCCTTCAC
GCTGGCGATCGAGGCTATTCCCGATCTGAAGATGCCGATCGCCGGCGATTATCCCGCCTATGTGCTGATGGAGATTTCCG
GCTCAGGGCTGGTGGATACGGCCGACCTTATGGGGCGTTTCCTCGAGGGCGTGATGGAAGATGGCCTGGTGCTGGACGGC
GTCATCGCTTCCTCCCGCGCGCAGGCGCAGTCGCTCTGGCTGTTCCGCGAGGGCATGAACGAAGGCCAGGCGCTGCGCGG
CAGCCATATGCGCACCGATATCTCGGTGCCGCTCTCCAAACTCGCGGCTTTCGTGGCCGAGGCGGAAGCCGAACTGGCGG
AAAAACTCCCCGAATGCCTTGCGGTTTCCTACGGTCACGTCGGAGACGGCAATGTCCACCTCAACGTGCTGCCGCCCAAC
GGTGCAACACTGGAGGAGCGTGAGGCCTTTATCTACAAGTCCAAGACACTCGTGAACGAAGTCCTCGACCGTTACGTCGG
CAGCATCAGTGCCGAACACGGCATTGGCCGCCTGAAACGCTCCGATTTCGAAAGCCGGCTATCGGATGTGCAGCGTCGGA
TGATCACGGGTTTGAAAAATGCCTTCGATCCCGATTTGCGAATGAATCCCGGTTGCCAGATAACCCTGCAACCGGATAGC
TAA

Upstream 100 bases:

>100_bases
CCTTATATGATCCGATTGAAAATAGTATTTTTCACAAACCGGTAAAAGCAAGGGCGAAAGACTCTTGCGTGGATATTTTA
GGGCGGATTGGACGGAGAGG

Downstream 100 bases:

>100_bases
TCGAGAAATAACAAAGGCGGTTTGAACACGCCGCCTTTGAAAACCCGCTGGCGGCGAAGGAGGAAGTCGCTGCCGCGGGA
AAACGAACCAATCGTTTCTG

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 480; Mature: 480

Protein sequence:

>480_residues
MELSEHDIGELRFSLKNRLGEALLLTSQEDMLRYCRDWHGDVTSSAVAVIRPRSTKEVSDTVIACAELGLAIIPQGGNTG
LVLGGIPDAPKHQVVLSLERMNAIRTIDSDDFSAVVEAGCILSEFKDAVQDKGMFFPLSLGAQGSCRIGGNVSTNAGGIN
VLRYGMTRELVLGLEVVLPDGTIWNGLSTLRKDNRGIDLKQLFIGAEGTLGIITAVAVKLYPNPEHVETALLGLNSLDDA
IKLYRRARRECCDLMSAFEFMPPVAFTLAIEAIPDLKMPIAGDYPAYVLMEISGSGLVDTADLMGRFLEGVMEDGLVLDG
VIASSRAQAQSLWLFREGMNEGQALRGSHMRTDISVPLSKLAAFVAEAEAELAEKLPECLAVSYGHVGDGNVHLNVLPPN
GATLEEREAFIYKSKTLVNEVLDRYVGSISAEHGIGRLKRSDFESRLSDVQRRMITGLKNAFDPDLRMNPGCQITLQPDS

Sequences:

>Translated_480_residues
MELSEHDIGELRFSLKNRLGEALLLTSQEDMLRYCRDWHGDVTSSAVAVIRPRSTKEVSDTVIACAELGLAIIPQGGNTG
LVLGGIPDAPKHQVVLSLERMNAIRTIDSDDFSAVVEAGCILSEFKDAVQDKGMFFPLSLGAQGSCRIGGNVSTNAGGIN
VLRYGMTRELVLGLEVVLPDGTIWNGLSTLRKDNRGIDLKQLFIGAEGTLGIITAVAVKLYPNPEHVETALLGLNSLDDA
IKLYRRARRECCDLMSAFEFMPPVAFTLAIEAIPDLKMPIAGDYPAYVLMEISGSGLVDTADLMGRFLEGVMEDGLVLDG
VIASSRAQAQSLWLFREGMNEGQALRGSHMRTDISVPLSKLAAFVAEAEAELAEKLPECLAVSYGHVGDGNVHLNVLPPN
GATLEEREAFIYKSKTLVNEVLDRYVGSISAEHGIGRLKRSDFESRLSDVQRRMITGLKNAFDPDLRMNPGCQITLQPDS
>Mature_480_residues
MELSEHDIGELRFSLKNRLGEALLLTSQEDMLRYCRDWHGDVTSSAVAVIRPRSTKEVSDTVIACAELGLAIIPQGGNTG
LVLGGIPDAPKHQVVLSLERMNAIRTIDSDDFSAVVEAGCILSEFKDAVQDKGMFFPLSLGAQGSCRIGGNVSTNAGGIN
VLRYGMTRELVLGLEVVLPDGTIWNGLSTLRKDNRGIDLKQLFIGAEGTLGIITAVAVKLYPNPEHVETALLGLNSLDDA
IKLYRRARRECCDLMSAFEFMPPVAFTLAIEAIPDLKMPIAGDYPAYVLMEISGSGLVDTADLMGRFLEGVMEDGLVLDG
VIASSRAQAQSLWLFREGMNEGQALRGSHMRTDISVPLSKLAAFVAEAEAELAEKLPECLAVSYGHVGDGNVHLNVLPPN
GATLEEREAFIYKSKTLVNEVLDRYVGSISAEHGIGRLKRSDFESRLSDVQRRMITGLKNAFDPDLRMNPGCQITLQPDS

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI119964728, Length=436, Percent_Identity=39.4495412844037, Blast_Score=289, Evalue=4e-78,
Organism=Homo sapiens, GI37595756, Length=442, Percent_Identity=31.9004524886878, Blast_Score=156, Evalue=3e-38,
Organism=Homo sapiens, GI37595754, Length=465, Percent_Identity=30.752688172043, Blast_Score=149, Evalue=8e-36,
Organism=Homo sapiens, GI4501993, Length=458, Percent_Identity=22.0524017467249, Blast_Score=92, Evalue=9e-19,
Organism=Escherichia coli, GI1789351, Length=462, Percent_Identity=28.1385281385281, Blast_Score=126, Evalue=3e-30,
Organism=Escherichia coli, GI48994907, Length=202, Percent_Identity=30.1980198019802, Blast_Score=78, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17534361, Length=467, Percent_Identity=35.117773019272, Blast_Score=265, Evalue=4e-71,
Organism=Caenorhabditis elegans, GI71992373, Length=479, Percent_Identity=28.8100208768267, Blast_Score=179, Evalue=3e-45,
Organism=Caenorhabditis elegans, GI71992381, Length=473, Percent_Identity=27.906976744186, Blast_Score=174, Evalue=1e-43,
Organism=Caenorhabditis elegans, GI71992392, Length=394, Percent_Identity=30.2030456852792, Blast_Score=160, Evalue=1e-39,
Organism=Caenorhabditis elegans, GI17556096, Length=453, Percent_Identity=24.0618101545254, Blast_Score=90, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6320023, Length=458, Percent_Identity=39.7379912663755, Blast_Score=327, Evalue=2e-90,
Organism=Saccharomyces cerevisiae, GI6320764, Length=478, Percent_Identity=35.3556485355649, Blast_Score=286, Evalue=6e-78,
Organism=Saccharomyces cerevisiae, GI6320027, Length=451, Percent_Identity=26.1640798226164, Blast_Score=135, Evalue=2e-32,
Organism=Drosophila melanogaster, GI18921117, Length=453, Percent_Identity=37.9690949227373, Blast_Score=278, Evalue=7e-75,
Organism=Drosophila melanogaster, GI24639277, Length=453, Percent_Identity=37.9690949227373, Blast_Score=278, Evalue=7e-75,
Organism=Drosophila melanogaster, GI24639275, Length=453, Percent_Identity=37.9690949227373, Blast_Score=278, Evalue=7e-75,
Organism=Drosophila melanogaster, GI24653753, Length=233, Percent_Identity=25.7510729613734, Blast_Score=77, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 52062; Mature: 52062

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELSEHDIGELRFSLKNRLGEALLLTSQEDMLRYCRDWHGDVTSSAVAVIRPRSTKEVSD
CCCCCCHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHH
TVIACAELGLAIIPQGGNTGLVLGGIPDAPKHQVVLSLERMNAIRTIDSDDFSAVVEAGC
HHHHHHHCCEEEEECCCCCEEEECCCCCCCCCCEEEEHHHHHHHHCCCCCHHHHHHHHHH
ILSEFKDAVQDKGMFFPLSLGAQGSCRIGGNVSTNAGGINVLRYGMTRELVLGLEVVLPD
HHHHHHHHHHHCCCEEEEECCCCCCEEECCCCCCCCCCEEEEECCCHHHHHHCEEEEECC
GTIWNGLSTLRKDNRGIDLKQLFIGAEGTLGIITAVAVKLYPNPEHVETALLGLNSLDDA
CCHHHHHHHHHHCCCCCCHHHHEECCCCCHHHHHHHHHEECCCHHHHHHHHHCCCCHHHH
IKLYRRARRECCDLMSAFEFMPPVAFTLAIEAIPDLKMPIAGDYPAYVLMEISGSGLVDT
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEEH
ADLMGRFLEGVMEDGLVLDGVIASSRAQAQSLWLFREGMNEGQALRGSHMRTDISVPLSK
HHHHHHHHHHHHHCCCEEEHHHHHCHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCHHH
LAAFVAEAEAELAEKLPECLAVSYGHVGDGNVHLNVLPPNGATLEEREAFIYKSKTLVNE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHH
VLDRYVGSISAEHGIGRLKRSDFESRLSDVQRRMITGLKNAFDPDLRMNPGCQITLQPDS
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCC
>Mature Secondary Structure
MELSEHDIGELRFSLKNRLGEALLLTSQEDMLRYCRDWHGDVTSSAVAVIRPRSTKEVSD
CCCCCCHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHH
TVIACAELGLAIIPQGGNTGLVLGGIPDAPKHQVVLSLERMNAIRTIDSDDFSAVVEAGC
HHHHHHHCCEEEEECCCCCEEEECCCCCCCCCCEEEEHHHHHHHHCCCCCHHHHHHHHHH
ILSEFKDAVQDKGMFFPLSLGAQGSCRIGGNVSTNAGGINVLRYGMTRELVLGLEVVLPD
HHHHHHHHHHHCCCEEEEECCCCCCEEECCCCCCCCCCEEEEECCCHHHHHHCEEEEECC
GTIWNGLSTLRKDNRGIDLKQLFIGAEGTLGIITAVAVKLYPNPEHVETALLGLNSLDDA
CCHHHHHHHHHHCCCCCCHHHHEECCCCCHHHHHHHHHEECCCHHHHHHHHHCCCCHHHH
IKLYRRARRECCDLMSAFEFMPPVAFTLAIEAIPDLKMPIAGDYPAYVLMEISGSGLVDT
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEEH
ADLMGRFLEGVMEDGLVLDGVIASSRAQAQSLWLFREGMNEGQALRGSHMRTDISVPLSK
HHHHHHHHHHHHHCCCEEEHHHHHCHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCHHH
LAAFVAEAEAELAEKLPECLAVSYGHVGDGNVHLNVLPPNGATLEEREAFIYKSKTLVNE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHH
VLDRYVGSISAEHGIGRLKRSDFESRLSDVQRRMITGLKNAFDPDLRMNPGCQITLQPDS
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]