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The map label for this gene is yjfR [C]

Identifier: 159185332

GI number: 159185332

Start: 2680635

End: 2681705

Strand: Reverse

Name: yjfR [C]

Synonym: Atu2696

Alternate gene names: 159185332

Gene position: 2681705-2680635 (Counterclockwise)

Preceding gene: 159185335

Following gene: 15889949

Centisome position: 94.37

GC content: 61.34

Gene sequence:

>1071_bases
ATGAAACGTCGAAACTTTTTTCGTTTTTCCGCACTTGGCCTGCTCGCTCTGGCGGGCGGGGGCCTTTATGCACGCCGTTC
GAGCGCCAGCGCCTATTATAGCGGCCCGATCTCCGATCATTTTGACGGAGTGCGCTTCTTCAATCCCGGCGGTACGCCGC
CCGGCAATTTCATGGGCCTTTTGAAATGGCGCTTTAATGGCGAGCGCGCCACATGGCCGGAAACCTATCCGAGCCCGTTT
CCCTTCGCGAAACCGGAAGCCCGGATCGACGGCAGGGATATGCGCGTCACCTTCGTCGGCCATGCCTCCTTTCTCATACA
AACGGCGGGGCTGAATATTCTTGTTGATCCGGTGTGGTCGCAGCGCACCAGCCCGCTCAGCTTTGCCGGCCCCAAGCGGG
TTAACCCGCCGGGCATCCGTTTTGAAGACCTGCCGCCCATCGATCTGGTGCTGGTGACGCATAATCATTACGACCATCTG
GATATGGAAACGCTGAAGCGCCTGCATGTGGCGCATAAGCCGCTCTTCATCACGCCGCTCGGCAATGACGCCGTCATCCG
CACCGGCGTTGAGGCGGCGCGTATCAAGGTGGGGGACTGGGGCGATGTGGTGGAGACGGGTTCGGTGAAAATTCACTTCG
AGCCCTGCCATCACTGGTCGGCGCGCGGTTTGAACGATCGGAGCATGGCACTCTGGGCTGCCTTCGTCATCGAAACGCCC
GGCGGCAAGATCTACCATATTGGCGATACCGGCTTCCACGAGGGTCTCAATTACGGCGCTGCTCGCAAGAAGCATGGTGA
GTTCCGCCTCGCCAACCTGCCCTTCGGCGCCTACGAACCGCGCTGGTTTATGAAGGGCCAGCACCAGAACCCGGCAGAAG
CCGTAGAGGGTATGAGGCTTTGTGGTGCGGCGCATGTCTGCGGCCACCATTGGGGTACGGTGCAGCTCACCGATGAGGCG
GTGGATGCGCCGCTTGCGGCCCTCAAGGCAGCACTGACGGAGCAGGGGGTGGAGGAGAGCCGTTTTCGGCCGATGCGCCC
CGGCGAGGTTTTCGACGTGCCTTCCGCCTGA

Upstream 100 bases:

>100_bases
TTTCCGGCCGACGAAGCCCGCAAGTCATCTTTGCGTGATCGGCCACAGGCCGCTATTGGCAGCGCTTGAACGGGGTCATT
GCGCTTCCTATACCTTTGTC

Downstream 100 bases:

>100_bases
CGACCGCCCCGTTTGCGCCGCAACAGTCTGGTAATTTCCCGTCCTTTCCGCCATATAGGGCGAAAGCGCGGGAAAATCCC
GTATGCAACTCGGTTTTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MKRRNFFRFSALGLLALAGGGLYARRSSASAYYSGPISDHFDGVRFFNPGGTPPGNFMGLLKWRFNGERATWPETYPSPF
PFAKPEARIDGRDMRVTFVGHASFLIQTAGLNILVDPVWSQRTSPLSFAGPKRVNPPGIRFEDLPPIDLVLVTHNHYDHL
DMETLKRLHVAHKPLFITPLGNDAVIRTGVEAARIKVGDWGDVVETGSVKIHFEPCHHWSARGLNDRSMALWAAFVIETP
GGKIYHIGDTGFHEGLNYGAARKKHGEFRLANLPFGAYEPRWFMKGQHQNPAEAVEGMRLCGAAHVCGHHWGTVQLTDEA
VDAPLAALKAALTEQGVEESRFRPMRPGEVFDVPSA

Sequences:

>Translated_356_residues
MKRRNFFRFSALGLLALAGGGLYARRSSASAYYSGPISDHFDGVRFFNPGGTPPGNFMGLLKWRFNGERATWPETYPSPF
PFAKPEARIDGRDMRVTFVGHASFLIQTAGLNILVDPVWSQRTSPLSFAGPKRVNPPGIRFEDLPPIDLVLVTHNHYDHL
DMETLKRLHVAHKPLFITPLGNDAVIRTGVEAARIKVGDWGDVVETGSVKIHFEPCHHWSARGLNDRSMALWAAFVIETP
GGKIYHIGDTGFHEGLNYGAARKKHGEFRLANLPFGAYEPRWFMKGQHQNPAEAVEGMRLCGAAHVCGHHWGTVQLTDEA
VDAPLAALKAALTEQGVEESRFRPMRPGEVFDVPSA
>Mature_356_residues
MKRRNFFRFSALGLLALAGGGLYARRSSASAYYSGPISDHFDGVRFFNPGGTPPGNFMGLLKWRFNGERATWPETYPSPF
PFAKPEARIDGRDMRVTFVGHASFLIQTAGLNILVDPVWSQRTSPLSFAGPKRVNPPGIRFEDLPPIDLVLVTHNHYDHL
DMETLKRLHVAHKPLFITPLGNDAVIRTGVEAARIKVGDWGDVVETGSVKIHFEPCHHWSARGLNDRSMALWAAFVIETP
GGKIYHIGDTGFHEGLNYGAARKKHGEFRLANLPFGAYEPRWFMKGQHQNPAEAVEGMRLCGAAHVCGHHWGTVQLTDEA
VDAPLAALKAALTEQGVEESRFRPMRPGEVFDVPSA

Specific function: Unknown

COG id: COG2220

COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To K.pneumoniae romA [H]

Homologues:

Organism=Homo sapiens, GI170932483, Length=277, Percent_Identity=35.3790613718412, Blast_Score=161, Evalue=7e-40,
Organism=Homo sapiens, GI170932481, Length=277, Percent_Identity=35.3790613718412, Blast_Score=161, Evalue=7e-40,
Organism=Caenorhabditis elegans, GI17543102, Length=380, Percent_Identity=31.8421052631579, Blast_Score=174, Evalue=9e-44,
Organism=Caenorhabditis elegans, GI25148824, Length=272, Percent_Identity=36.0294117647059, Blast_Score=172, Evalue=2e-43,
Organism=Caenorhabditis elegans, GI17543100, Length=272, Percent_Identity=36.0294117647059, Blast_Score=172, Evalue=2e-43,
Organism=Caenorhabditis elegans, GI17543104, Length=267, Percent_Identity=36.3295880149813, Blast_Score=166, Evalue=2e-41,
Organism=Saccharomyces cerevisiae, GI6325154, Length=266, Percent_Identity=32.3308270676692, Blast_Score=124, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39428; Mature: 39428

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: PS00133 CARBOXYPEPT_ZN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRNFFRFSALGLLALAGGGLYARRSSASAYYSGPISDHFDGVRFFNPGGTPPGNFMGL
CCCCCEEHHHHHHHHHHCCCCEEEECCCCCEEECCCCCCCCCCEEEECCCCCCCCCCEEE
LKWRFNGERATWPETYPSPFPFAKPEARIDGRDMRVTFVGHASFLIQTAGLNILVDPVWS
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCEEEEEECCCEEEECCCCC
QRTSPLSFAGPKRVNPPGIRFEDLPPIDLVLVTHNHYDHLDMETLKRLHVAHKPLFITPL
CCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEC
GNDAVIRTGVEAARIKVGDWGDVVETGSVKIHFEPCHHWSARGLNDRSMALWAAFVIETP
CCCCEEECCCCEEEEEECCCCCCEECCEEEEEEECCCCCCCCCCCCCCEEEEEEEEEECC
GGKIYHIGDTGFHEGLNYGAARKKHGEFRLANLPFGAYEPRWFMKGQHQNPAEAVEGMRL
CCEEEECCCCCHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCEECCCCCCHHHHHHHHHH
CGAAHVCGHHWGTVQLTDEAVDAPLAALKAALTEQGVEESRFRPMRPGEVFDVPSA
HHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCEEECCCC
>Mature Secondary Structure
MKRRNFFRFSALGLLALAGGGLYARRSSASAYYSGPISDHFDGVRFFNPGGTPPGNFMGL
CCCCCEEHHHHHHHHHHCCCCEEEECCCCCEEECCCCCCCCCCEEEECCCCCCCCCCEEE
LKWRFNGERATWPETYPSPFPFAKPEARIDGRDMRVTFVGHASFLIQTAGLNILVDPVWS
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCEEEEEECCCEEEECCCCC
QRTSPLSFAGPKRVNPPGIRFEDLPPIDLVLVTHNHYDHLDMETLKRLHVAHKPLFITPL
CCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEC
GNDAVIRTGVEAARIKVGDWGDVVETGSVKIHFEPCHHWSARGLNDRSMALWAAFVIETP
CCCCEEECCCCEEEEEECCCCCCEECCEEEEEEECCCCCCCCCCCCCCEEEEEEEEEECC
GGKIYHIGDTGFHEGLNYGAARKKHGEFRLANLPFGAYEPRWFMKGQHQNPAEAVEGMRL
CCEEEECCCCCHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCEECCCCCCHHHHHHHHHH
CGAAHVCGHHWGTVQLTDEAVDAPLAALKAALTEQGVEESRFRPMRPGEVFDVPSA
HHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]