Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is yliG [C]
Identifier: 159185331
GI number: 159185331
Start: 2678342
End: 2679616
Strand: Reverse
Name: yliG [C]
Synonym: Atu2694
Alternate gene names: 159185331
Gene position: 2679616-2678342 (Counterclockwise)
Preceding gene: 15889949
Following gene: 15889947
Centisome position: 94.3
GC content: 60.63
Gene sequence:
>1275_bases ATGAGTGGCGTCGAGGTCATAACCTTCGGCTGCCGTCTCAACACCTATGAATCGGAAGTGATGCGGGCGGAGGCCGAAAA GGCGGGGCTCAACAATGCCGTGCTGGTCAATACCTGCGCCGTGACGGGCGAAGCGGTGCGGCAGGCGCGCCAGGCCATCC GCCGCGCCCGGCGGGATAATCCGCATGCACGCATCATCGTCACCGGCTGCGCCGCCCAGACAGAAAAGCAGACCTTCGCC GACATGCCGGAAGTGGATGCGGTGCTGGGCAACGAGGAAAAGCTGAAAAGCGCCTCCTATCGCGCGCTGCCGGATTTCGG CGTTTCAGCGGAAGAAAAGCTGCGCGTCAACGACATCATGAGCATCAAGGCGACCGCGCCGCAGATGGTGAAGCACATTG ACGGGCATGTGCGCGCCTTCATTCAGGTGCAGAATGGCTGCGATCATCGCTGCACCTTCTGCATCATTCCCTATGGGCGC GGAAATTCGCGTTCCGTGCCGATGGGTGCCGTGGTGGATCAGGCCCGCAGGCTGACGGAAAGCGGCTATTGCGAAATCGT GCTGACCGGTGTGGATGCCACGAGTTATGGGGCTGATCTGCCGGGCGAACCGTCGCTCGGTTACCTCGCCAAGACATTGC TGAAGCAGGTGCCTGATATTATTCGTCTCCGGCTTTCCTCGATCGATAGTATTGAGGCAGATCATCATCTGATGGATCTG ATTGCCGATGAGCCGCGTTTCATGCCGCATCTGCACCTGTCCCTCCAGCATGGCGACGACATGATCCTGAAACGCATGAA ACGCCGTCATTTGCGGGCCGATGCCATTCGCTTCTGCAACGAGGTGCGATCGCTGAGGCCCGATATCGCCTTCGGTGCGG ATATGATCGCCGGTTTCCCGACCGAAACGGAAGAGATGCTTGAAAACGCCGCGACGCTGGCGGAAGAATGCGGTATTTCC AGCCTGCACGTGTTTCCCTATAGCCCGCGCGAAGGTACGCCTGCTGTGCGTATGCCGCAGCTCGACCGGGCGCTGGTGAA GGAGCGGGCGGGACGGCTTCGGGCGCGCGGCGAGGCGCTCAAGCAGGCGCATCTGCAAAACATGGTCGGTTCGGTGCAGA CGGTCCTCGTCGAAAACAGCGGTTTTGCCCATACCGACAATTTCACGCTGGTGGCAGCGCCCGATCTTGCCCCGCGTACT CTTGCGCAGGTTGCGATTACCGGCCACAACGGCAAACATCTGAACATGAAGCTTCTGGCGGCGGATGCGGCCTGA
Upstream 100 bases:
>100_bases ATCACGTCGTCATGACCGGCCCGGCCGAATGGGAATGGTCGGGTTCCGTCGATCCCGTCACCGGCGTCTGGGCGCGGGAT GCGGTCGAGCGGGGGGCTGT
Downstream 100 bases:
>100_bases GGCGACCAAAGAGAAAAGACACGGGAACAACCATGGCCCTCGGCTTCATCAAAAAAGTCTTTTCGTTCGGCAAGGACAAG GCCGAAACGGAAGAGCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 424; Mature: 423
Protein sequence:
>424_residues MSGVEVITFGCRLNTYESEVMRAEAEKAGLNNAVLVNTCAVTGEAVRQARQAIRRARRDNPHARIIVTGCAAQTEKQTFA DMPEVDAVLGNEEKLKSASYRALPDFGVSAEEKLRVNDIMSIKATAPQMVKHIDGHVRAFIQVQNGCDHRCTFCIIPYGR GNSRSVPMGAVVDQARRLTESGYCEIVLTGVDATSYGADLPGEPSLGYLAKTLLKQVPDIIRLRLSSIDSIEADHHLMDL IADEPRFMPHLHLSLQHGDDMILKRMKRRHLRADAIRFCNEVRSLRPDIAFGADMIAGFPTETEEMLENAATLAEECGIS SLHVFPYSPREGTPAVRMPQLDRALVKERAGRLRARGEALKQAHLQNMVGSVQTVLVENSGFAHTDNFTLVAAPDLAPRT LAQVAITGHNGKHLNMKLLAADAA
Sequences:
>Translated_424_residues MSGVEVITFGCRLNTYESEVMRAEAEKAGLNNAVLVNTCAVTGEAVRQARQAIRRARRDNPHARIIVTGCAAQTEKQTFA DMPEVDAVLGNEEKLKSASYRALPDFGVSAEEKLRVNDIMSIKATAPQMVKHIDGHVRAFIQVQNGCDHRCTFCIIPYGR GNSRSVPMGAVVDQARRLTESGYCEIVLTGVDATSYGADLPGEPSLGYLAKTLLKQVPDIIRLRLSSIDSIEADHHLMDL IADEPRFMPHLHLSLQHGDDMILKRMKRRHLRADAIRFCNEVRSLRPDIAFGADMIAGFPTETEEMLENAATLAEECGIS SLHVFPYSPREGTPAVRMPQLDRALVKERAGRLRARGEALKQAHLQNMVGSVQTVLVENSGFAHTDNFTLVAAPDLAPRT LAQVAITGHNGKHLNMKLLAADAA >Mature_423_residues SGVEVITFGCRLNTYESEVMRAEAEKAGLNNAVLVNTCAVTGEAVRQARQAIRRARRDNPHARIIVTGCAAQTEKQTFAD MPEVDAVLGNEEKLKSASYRALPDFGVSAEEKLRVNDIMSIKATAPQMVKHIDGHVRAFIQVQNGCDHRCTFCIIPYGRG NSRSVPMGAVVDQARRLTESGYCEIVLTGVDATSYGADLPGEPSLGYLAKTLLKQVPDIIRLRLSSIDSIEADHHLMDLI ADEPRFMPHLHLSLQHGDDMILKRMKRRHLRADAIRFCNEVRSLRPDIAFGADMIAGFPTETEEMLENAATLAEECGISS LHVFPYSPREGTPAVRMPQLDRALVKERAGRLRARGEALKQAHLQNMVGSVQTVLVENSGFAHTDNFTLVAAPDLAPRTL AQVAITGHNGKHLNMKLLAADAA
Specific function: Unknown
COG id: COG0621
COG function: function code J; 2-methylthioadenine synthetase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 MTTase N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI93277076, Length=415, Percent_Identity=27.4698795180723, Blast_Score=152, Evalue=7e-37, Organism=Homo sapiens, GI28872784, Length=418, Percent_Identity=26.0765550239234, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI28872782, Length=422, Percent_Identity=26.0663507109005, Blast_Score=124, Evalue=2e-28, Organism=Escherichia coli, GI1787057, Length=392, Percent_Identity=29.3367346938776, Blast_Score=151, Evalue=7e-38, Organism=Escherichia coli, GI1786882, Length=403, Percent_Identity=27.5434243176179, Blast_Score=141, Evalue=9e-35, Organism=Caenorhabditis elegans, GI17553146, Length=474, Percent_Identity=28.6919831223629, Blast_Score=161, Evalue=6e-40, Organism=Caenorhabditis elegans, GI71996771, Length=263, Percent_Identity=27.7566539923954, Blast_Score=107, Evalue=9e-24, Organism=Drosophila melanogaster, GI19922432, Length=391, Percent_Identity=29.156010230179, Blast_Score=147, Evalue=1e-35, Organism=Drosophila melanogaster, GI21356207, Length=422, Percent_Identity=27.2511848341232, Blast_Score=145, Evalue=5e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR020612 - InterPro: IPR013848 - InterPro: IPR006467 - InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM; PF00919 UPF0004 [H]
EC number: NA
Molecular weight: Translated: 46491; Mature: 46360
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: PS01278 UPF0004
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGVEVITFGCRLNTYESEVMRAEAEKAGLNNAVLVNTCAVTGEAVRQARQAIRRARRDN CCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEEHHCCHHHHHHHHHHHHHHHCCC PHARIIVTGCAAQTEKQTFADMPEVDAVLGNEEKLKSASYRALPDFGVSAEEKLRVNDIM CCEEEEEEECCCCCHHHHHCCCCCHHHHCCCHHHHHCCCCCCCCCCCCCCHHHEEHHHHE SIKATAPQMVKHIDGHVRAFIQVQNGCDHRCTFCIIPYGRGNSRSVPMGAVVDQARRLTE EECCCHHHHHHHHCCHHEEEEEECCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHC SGYCEIVLTGVDATSYGADLPGEPSLGYLAKTLLKQVPDIIRLRLSSIDSIEADHHLMDL CCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHH IADEPRFMPHLHLSLQHGDDMILKRMKRRHLRADAIRFCNEVRSLRPDIAFGADMIAGFP HHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHCCCC TETEEMLENAATLAEECGISSLHVFPYSPREGTPAVRMPQLDRALVKERAGRLRARGEAL CCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KQAHLQNMVGSVQTVLVENSGFAHTDNFTLVAAPDLAPRTLAQVAITGHNGKHLNMKLLA HHHHHHHHHHHHEEEEEECCCCEECCCEEEEECCCCCHHHEEEEEEECCCCCEEEEEEEE ADAA ECCC >Mature Secondary Structure SGVEVITFGCRLNTYESEVMRAEAEKAGLNNAVLVNTCAVTGEAVRQARQAIRRARRDN CCCEEEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEEHHCCHHHHHHHHHHHHHHHCCC PHARIIVTGCAAQTEKQTFADMPEVDAVLGNEEKLKSASYRALPDFGVSAEEKLRVNDIM CCEEEEEEECCCCCHHHHHCCCCCHHHHCCCHHHHHCCCCCCCCCCCCCCHHHEEHHHHE SIKATAPQMVKHIDGHVRAFIQVQNGCDHRCTFCIIPYGRGNSRSVPMGAVVDQARRLTE EECCCHHHHHHHHCCHHEEEEEECCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHC SGYCEIVLTGVDATSYGADLPGEPSLGYLAKTLLKQVPDIIRLRLSSIDSIEADHHLMDL CCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHH IADEPRFMPHLHLSLQHGDDMILKRMKRRHLRADAIRFCNEVRSLRPDIAFGADMIAGFP HHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHCCCC TETEEMLENAATLAEECGISSLHVFPYSPREGTPAVRMPQLDRALVKERAGRLRARGEAL CCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KQAHLQNMVGSVQTVLVENSGFAHTDNFTLVAAPDLAPRTLAQVAITGHNGKHLNMKLLA HHHHHHHHHHHHEEEEEECCCCEECCCEEEEECCCCCHHHEEEEEEECCCCCEEEEEEEE ADAA ECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]