Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185301
Identifier: 159185301
GI number: 159185301
Start: 2614951
End: 2615451
Strand: Reverse
Name: 159185301
Synonym: Atu2631
Alternate gene names: NA
Gene position: 2615451-2614951 (Counterclockwise)
Preceding gene: 15889887
Following gene: 15889885
Centisome position: 92.04
GC content: 57.49
Gene sequence:
>501_bases ATGGCATCTTTCAGTCAAGTTTCCTTTTCCATTCCGCAGCGTGTCATTCACTGGGCAATGGCGCTTCTGATCTTCTTCAA TCTGCTGTTTCCCGACGCCATGGCCCACGCCTACCGGCTGATGCGGCGGGGTGAGACGCTGACGCCGGACCAGATTTCTT CGGCCAATATCCATGCCTATGTCGGCTTTGCCATCCTGCTCCTTGCGGTTCTGCGTCTCTGTCTTCGCTTTTTCCAGGGC GTACCGCCGCATCCGGCCGAAGAACCGCGTGCGTCGCAAATTGCCGCCAAGGCGGCCCACTTCACCTTTTATGTCCTGTT TTTCATTCTGCCGCTTTCCGGCATCGCTGCTTATTACTTCGGCATCGCAACGGCAGGAGAGCTGCATTCCGGTCCCTTCA AGGCTGTGATGTGGGTGCTGATCGCCGGCCATGTCGCAGCCGTTCTGGTTCACCAGTTCTACTGGCGCACCAATGTCCTG AAGCGCATGACGCACGGCTAG
Upstream 100 bases:
>100_bases TTAAATTTCAGTCATCTGTTGAACCCCGGCTTGCCATGCAGGCCGGGGTTTCTCATACTCGTGCCATAGCCTGTCTAACC TTTTGATAAAAGGCAATAAA
Downstream 100 bases:
>100_bases GGTCTGAGCGGCGGTTTGTCGCGTTTTCGGTTCGACGGAAAAAGACGATGGTGGCCCTTGCCGCACCGGGCGGCTGGGGT ACAGAGATGCGAAACAACGA
Product: hypothetical protein
Products: NA
Alternate protein names: Cytochrome; Transmembrane Cytochrome B
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MASFSQVSFSIPQRVIHWAMALLIFFNLLFPDAMAHAYRLMRRGETLTPDQISSANIHAYVGFAILLLAVLRLCLRFFQG VPPHPAEEPRASQIAAKAAHFTFYVLFFILPLSGIAAYYFGIATAGELHSGPFKAVMWVLIAGHVAAVLVHQFYWRTNVL KRMTHG
Sequences:
>Translated_166_residues MASFSQVSFSIPQRVIHWAMALLIFFNLLFPDAMAHAYRLMRRGETLTPDQISSANIHAYVGFAILLLAVLRLCLRFFQG VPPHPAEEPRASQIAAKAAHFTFYVLFFILPLSGIAAYYFGIATAGELHSGPFKAVMWVLIAGHVAAVLVHQFYWRTNVL KRMTHG >Mature_165_residues ASFSQVSFSIPQRVIHWAMALLIFFNLLFPDAMAHAYRLMRRGETLTPDQISSANIHAYVGFAILLLAVLRLCLRFFQGV PPHPAEEPRASQIAAKAAHFTFYVLFFILPLSGIAAYYFGIATAGELHSGPFKAVMWVLIAGHVAAVLVHQFYWRTNVLK RMTHG
Specific function: Unknown
COG id: COG3038
COG function: function code C; Cytochrome B561
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18604; Mature: 18473
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASFSQVSFSIPQRVIHWAMALLIFFNLLFPDAMAHAYRLMRRGETLTPDQISSANIHAY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH VGFAILLLAVLRLCLRFFQGVPPHPAEEPRASQIAAKAAHFTFYVLFFILPLSGIAAYYF HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIATAGELHSGPFKAVMWVLIAGHVAAVLVHQFYWRTNVLKRMTHG HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ASFSQVSFSIPQRVIHWAMALLIFFNLLFPDAMAHAYRLMRRGETLTPDQISSANIHAY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH VGFAILLLAVLRLCLRFFQGVPPHPAEEPRASQIAAKAAHFTFYVLFFILPLSGIAAYYF HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIATAGELHSGPFKAVMWVLIAGHVAAVLVHQFYWRTNVLKRMTHG HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA