Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is ybjG [C]
Identifier: 159185289
GI number: 159185289
Start: 2590097
End: 2590825
Strand: Reverse
Name: ybjG [C]
Synonym: Atu2611
Alternate gene names: 159185289
Gene position: 2590825-2590097 (Counterclockwise)
Preceding gene: 229007178
Following gene: 15889866
Centisome position: 91.18
GC content: 58.44
Gene sequence:
>729_bases ATGCAAGAAAAAGACAAGAGGATGTTGATGCGACGTTTCGTGGTTTCCAGCGGCTGGATTTTTGCGGCAAGCCTTGTGCT GGTTCTGGTTTTCATTCCTTTCGATCCGCGCCTTTCCGAAACCGCGCAGGCACTGCCGGGCCGAATAGTCACCTTCAATC GCGCTATTACCGATTTCGGAACCTTCCGCTGGATGCTTTACTCCACGGGCGCGCTCGCCATTCTTGCTTATGTTGCCGCG CGTGTCCTGCAGGCGCAGACCTATGGCGGGCGGCTGAGAACGGCGTGGCGGCTTCTCGCTTATTTTTTCCTGACGATCGG CACGGCGAGTATTCTCGTCCATACGCTGAAATTCCTGATCGGGCGGGCGCGGCCGGAGCTTTTTCTGGAAATGGGCGCCT ACAGCCTCACGCCTTTTACCGGCGACAATCTTTATGAGAGTTTCCCCTCAGGCCATTCGACGGCTGCCGGGGCGTTTTTC GGTGTTTTCGCCATGCTGATGCCGCGCTTCCGCTGGGCGTTCCTGCTGCTTGCGCTCGTGATCGGCGTTTCGCGTGTCAT CGTCGGTGCGCATTATCCAAGCGATGTCGCAGCCGGGCTGCTGCTCGGCCTGTGGACGGCCATGGCCTTCGCCTTTATCT TTGCCCGGTTCGAAATGCTGTTCCGTTTCGACGCACAGGGCTGGCCGCAGCCGAAGAATGCAAGCCCTCCGGCGGCTGAA ACAAGATAA
Upstream 100 bases:
>100_bases CAGCCCGTCGGTTTTATTGGCAGAATTAGGCTCTACTCGCGAAAACCCGCCATAACAAGGACAAAGCCCAGGCTATTGTT TTTGTGAGGCGCAAAGCCAT
Downstream 100 bases:
>100_bases AGAGATTTAACGGGACCGGATGGGGGCGAGGGTGATGGAAGACGCGAAAGCCGGGCATGAAAAGGACGGCAGAGCCGTTC AGAATATCCACACCTGTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Membrane-Associated Phospholipid Phosphatase; Lipid A 1-Phosphatase; Phosphatase Protein; PAP2 Superfamily Protein; Phosphoesterase Pa-Phosphatase Related Protein; SNARE Associated Golgi Protein; Phosphoesterase PA-Phosphatase-Like Protein; PAP2 Family Phosphoesterase; PAP2 Superfamily; Pap2 Superfamily Protein; Lipid A 1-Phosphatase Protein; Phosphatidylglycerophosphatase B-Related Protein; Phosphatidylglycerophosphatase B; Phosphoesterase PA-Phosphatase Related Protein; Transmembrane Lipid A 1-Phosphatase; PA-Phosphatase Related Phosphoesterase; Phosphoesterase
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MQEKDKRMLMRRFVVSSGWIFAASLVLVLVFIPFDPRLSETAQALPGRIVTFNRAITDFGTFRWMLYSTGALAILAYVAA RVLQAQTYGGRLRTAWRLLAYFFLTIGTASILVHTLKFLIGRARPELFLEMGAYSLTPFTGDNLYESFPSGHSTAAGAFF GVFAMLMPRFRWAFLLLALVIGVSRVIVGAHYPSDVAAGLLLGLWTAMAFAFIFARFEMLFRFDAQGWPQPKNASPPAAE TR
Sequences:
>Translated_242_residues MQEKDKRMLMRRFVVSSGWIFAASLVLVLVFIPFDPRLSETAQALPGRIVTFNRAITDFGTFRWMLYSTGALAILAYVAA RVLQAQTYGGRLRTAWRLLAYFFLTIGTASILVHTLKFLIGRARPELFLEMGAYSLTPFTGDNLYESFPSGHSTAAGAFF GVFAMLMPRFRWAFLLLALVIGVSRVIVGAHYPSDVAAGLLLGLWTAMAFAFIFARFEMLFRFDAQGWPQPKNASPPAAE TR >Mature_242_residues MQEKDKRMLMRRFVVSSGWIFAASLVLVLVFIPFDPRLSETAQALPGRIVTFNRAITDFGTFRWMLYSTGALAILAYVAA RVLQAQTYGGRLRTAWRLLAYFFLTIGTASILVHTLKFLIGRARPELFLEMGAYSLTPFTGDNLYESFPSGHSTAAGAFF GVFAMLMPRFRWAFLLLALVIGVSRVIVGAHYPSDVAAGLLLGLWTAMAFAFIFARFEMLFRFDAQGWPQPKNASPPAAE TR
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27014; Mature: 27014
Theoretical pI: Translated: 10.95; Mature: 10.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEKDKRMLMRRFVVSSGWIFAASLVLVLVFIPFDPRLSETAQALPGRIVTFNRAITDFG CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEHHHHHHHHH TFRWMLYSTGALAILAYVAARVLQAQTYGGRLRTAWRLLAYFFLTIGTASILVHTLKFLI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GRARPELFLEMGAYSLTPFTGDNLYESFPSGHSTAAGAFFGVFAMLMPRFRWAFLLLALV HCCCHHHHHHHCCCEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IGVSRVIVGAHYPSDVAAGLLLGLWTAMAFAFIFARFEMLFRFDAQGWPQPKNASPPAAE HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC TR CC >Mature Secondary Structure MQEKDKRMLMRRFVVSSGWIFAASLVLVLVFIPFDPRLSETAQALPGRIVTFNRAITDFG CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEHHHHHHHHH TFRWMLYSTGALAILAYVAARVLQAQTYGGRLRTAWRLLAYFFLTIGTASILVHTLKFLI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GRARPELFLEMGAYSLTPFTGDNLYESFPSGHSTAAGAFFGVFAMLMPRFRWAFLLLALV HCCCHHHHHHHCCCEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IGVSRVIVGAHYPSDVAAGLLLGLWTAMAFAFIFARFEMLFRFDAQGWPQPKNASPPAAE HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC TR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA