| Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
|---|---|
| Accession | NC_003062 |
| Length | 2,841,580 |
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The map label for this gene is fabG [H]
Identifier: 159185285
GI number: 159185285
Start: 2576358
End: 2577140
Strand: Reverse
Name: fabG [H]
Synonym: Atu2597
Alternate gene names: 159185285
Gene position: 2577140-2576358 (Counterclockwise)
Preceding gene: 159185286
Following gene: 15889853
Centisome position: 90.69
GC content: 61.43
Gene sequence:
>783_bases ATGAACGACAGGAAAGACCAGCTCGCCATCGTAACCGGTGCGGCAGGGGATATTGGCCGGGCGATTGCTGCGGCACTTTC TGAAAGCCATAAAAAGGTGGTGCTGGTCGATATCGATGCCGACGCCCTGTCCGATGCGCTTTACAAGCTTTCCGGTCCGG GCTTCGTTGCCAAGACCTGTGATGTCACTGATCCGCAGGATCTTGCGCGGCTGGCCGCCGAGGTCGCGGAGTTTGGCGAA GTCGCCACCCTCGTCAATAATGCCGGTGCGGCACGGGCCGTCAGCCTGCACGACACAACGGCTGAAATCTGGCGCAAGGA CAATGCGCTCAATCTGGAAGCGCCGTTTCTCTGCTTCAGGGCTTTCGAGGAGGCGTTGAAGCGCACCCAGGGCTCTGTCA TCAATATCACATCCGTCAATGGCATGGCTGTGTTCGGCCATCCGGCCTATAGCGCGGCAAAGGCCGGGTTGATCCATCTG ACCAAGCTGATCGCCGTCGAATACGGCAAATTCGGCATCCGCGCTAACGCAGTCGCGCCGGGCACCGTCCGCACGCAGGC ATGGGAGGCGCGCGCTGCCACCAATCCCCAGGTCTTCGAGGAAGCCAAGCACTGGTATCCGCTGCAGCGGATCGTCAGAC CCGAGGATGTGGCCAATGCGGTTGCTTTTCTCGCTGGCCCGCAGGCTGCCGCCATCAGCGGCGTGTGCCTGCCGGTCGAT TGTGGGCTGACGGCAGGCCAAGCGCCACTCGCCCGGACATTTTCGCAATCCGAACACTACTGA
Upstream 100 bases:
>100_bases ACAAGCAATTGCTCGGTGACTGAGGGCGAGAAAAAATACAGGCGGTTTCGCCTGAGGCCCCTGTGGTGGGTCGGAAAGTT TTAAGGGAGTTGTAAAGGTG
Downstream 100 bases:
>100_bases CCGAAACCCTCTGACGGGTTCAATGCGCAATAAAGGGGAGCATCATGGCGCTCGCACAGTATCGTCTCGAAAATTCATGG CATCCGCTCGCTGAGTCGGC
Product: short chain dehydrogenase
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MNDRKDQLAIVTGAAGDIGRAIAAALSESHKKVVLVDIDADALSDALYKLSGPGFVAKTCDVTDPQDLARLAAEVAEFGE VATLVNNAGAARAVSLHDTTAEIWRKDNALNLEAPFLCFRAFEEALKRTQGSVINITSVNGMAVFGHPAYSAAKAGLIHL TKLIAVEYGKFGIRANAVAPGTVRTQAWEARAATNPQVFEEAKHWYPLQRIVRPEDVANAVAFLAGPQAAAISGVCLPVD CGLTAGQAPLARTFSQSEHY
Sequences:
>Translated_260_residues MNDRKDQLAIVTGAAGDIGRAIAAALSESHKKVVLVDIDADALSDALYKLSGPGFVAKTCDVTDPQDLARLAAEVAEFGE VATLVNNAGAARAVSLHDTTAEIWRKDNALNLEAPFLCFRAFEEALKRTQGSVINITSVNGMAVFGHPAYSAAKAGLIHL TKLIAVEYGKFGIRANAVAPGTVRTQAWEARAATNPQVFEEAKHWYPLQRIVRPEDVANAVAFLAGPQAAAISGVCLPVD CGLTAGQAPLARTFSQSEHY >Mature_260_residues MNDRKDQLAIVTGAAGDIGRAIAAALSESHKKVVLVDIDADALSDALYKLSGPGFVAKTCDVTDPQDLARLAAEVAEFGE VATLVNNAGAARAVSLHDTTAEIWRKDNALNLEAPFLCFRAFEEALKRTQGSVINITSVNGMAVFGHPAYSAAKAGLIHL TKLIAVEYGKFGIRANAVAPGTVRTQAWEARAATNPQVFEEAKHWYPLQRIVRPEDVANAVAFLAGPQAAAISGVCLPVD CGLTAGQAPLARTFSQSEHY
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI15277342, Length=257, Percent_Identity=33.852140077821, Blast_Score=104, Evalue=6e-23, Organism=Homo sapiens, GI19923817, Length=249, Percent_Identity=32.5301204819277, Blast_Score=101, Evalue=9e-22, Organism=Homo sapiens, GI5031737, Length=243, Percent_Identity=31.2757201646091, Blast_Score=96, Evalue=2e-20, Organism=Homo sapiens, GI32483357, Length=243, Percent_Identity=30.8641975308642, Blast_Score=95, Evalue=5e-20, Organism=Homo sapiens, GI59889578, Length=233, Percent_Identity=32.1888412017167, Blast_Score=88, Evalue=6e-18, Organism=Homo sapiens, GI109715829, Length=237, Percent_Identity=29.957805907173, Blast_Score=86, Evalue=5e-17, Organism=Homo sapiens, GI40254992, Length=241, Percent_Identity=31.1203319502075, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI7705925, Length=239, Percent_Identity=30.9623430962343, Blast_Score=82, Evalue=3e-16, Organism=Homo sapiens, GI66933014, Length=227, Percent_Identity=30.3964757709251, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI33667109, Length=194, Percent_Identity=31.4432989690722, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI31542939, Length=237, Percent_Identity=30.379746835443, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI126723750, Length=246, Percent_Identity=26.8292682926829, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI4504505, Length=196, Percent_Identity=31.1224489795918, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI126723191, Length=182, Percent_Identity=31.3186813186813, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI20149619, Length=195, Percent_Identity=26.6666666666667, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI40807363, Length=231, Percent_Identity=25.5411255411255, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI4503301, Length=188, Percent_Identity=28.1914893617021, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI10190704, Length=249, Percent_Identity=27.710843373494, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1787335, Length=248, Percent_Identity=38.7096774193548, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1787905, Length=250, Percent_Identity=32, Blast_Score=104, Evalue=8e-24, Organism=Escherichia coli, GI87082100, Length=255, Percent_Identity=32.156862745098, Blast_Score=101, Evalue=4e-23, Organism=Escherichia coli, GI1789208, Length=249, Percent_Identity=28.5140562248996, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1786812, Length=246, Percent_Identity=30.0813008130081, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1789057, Length=257, Percent_Identity=28.7937743190661, Blast_Score=84, Evalue=8e-18, Organism=Escherichia coli, GI87082160, Length=246, Percent_Identity=30.0813008130081, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1788459, Length=244, Percent_Identity=29.5081967213115, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI2367175, Length=245, Percent_Identity=28.5714285714286, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1790717, Length=245, Percent_Identity=27.7551020408163, Blast_Score=74, Evalue=7e-15, Organism=Escherichia coli, GI2367365, Length=190, Percent_Identity=30.5263157894737, Blast_Score=65, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17555706, Length=242, Percent_Identity=33.8842975206612, Blast_Score=118, Evalue=3e-27, Organism=Caenorhabditis elegans, GI25147288, Length=243, Percent_Identity=32.5102880658436, Blast_Score=110, Evalue=5e-25, Organism=Caenorhabditis elegans, GI71994600, Length=246, Percent_Identity=29.2682926829268, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI71994604, Length=253, Percent_Identity=29.2490118577075, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17562990, Length=234, Percent_Identity=27.7777777777778, Blast_Score=91, Evalue=7e-19, Organism=Caenorhabditis elegans, GI17560150, Length=235, Percent_Identity=29.3617021276596, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17531453, Length=256, Percent_Identity=28.125, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17562910, Length=265, Percent_Identity=26.0377358490566, Blast_Score=87, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17560332, Length=268, Percent_Identity=29.8507462686567, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17562906, Length=269, Percent_Identity=27.5092936802974, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17562908, Length=259, Percent_Identity=27.027027027027, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17559104, Length=265, Percent_Identity=29.0566037735849, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17538480, Length=243, Percent_Identity=30.4526748971193, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17565030, Length=260, Percent_Identity=31.5384615384615, Blast_Score=81, Evalue=4e-16, Organism=Caenorhabditis elegans, GI193204405, Length=238, Percent_Identity=28.9915966386555, Blast_Score=81, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17562904, Length=243, Percent_Identity=29.2181069958848, Blast_Score=81, Evalue=6e-16, Organism=Caenorhabditis elegans, GI72000259, Length=244, Percent_Identity=29.0983606557377, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17538486, Length=239, Percent_Identity=29.2887029288703, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17563726, Length=232, Percent_Identity=27.1551724137931, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17560220, Length=248, Percent_Identity=26.6129032258064, Blast_Score=77, Evalue=9e-15, Organism=Caenorhabditis elegans, GI115534694, Length=253, Percent_Identity=27.6679841897233, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17536651, Length=253, Percent_Identity=28.0632411067194, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17551412, Length=241, Percent_Identity=27.8008298755187, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17564282, Length=261, Percent_Identity=26.4367816091954, Blast_Score=71, Evalue=4e-13, Organism=Caenorhabditis elegans, GI193203115, Length=245, Percent_Identity=27.3469387755102, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17544670, Length=264, Percent_Identity=25, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17561402, Length=253, Percent_Identity=25.6916996047431, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI193203117, Length=241, Percent_Identity=27.3858921161826, Blast_Score=67, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17536025, Length=256, Percent_Identity=28.125, Blast_Score=67, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17560676, Length=251, Percent_Identity=27.0916334661355, Blast_Score=67, Evalue=9e-12, Organism=Caenorhabditis elegans, GI17508895, Length=230, Percent_Identity=27.3913043478261, Blast_Score=64, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=249, Percent_Identity=27.3092369477912, Blast_Score=75, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6322861, Length=190, Percent_Identity=30, Blast_Score=72, Evalue=1e-13, Organism=Drosophila melanogaster, GI24639444, Length=243, Percent_Identity=32.9218106995885, Blast_Score=114, Evalue=6e-26, Organism=Drosophila melanogaster, GI21357041, Length=251, Percent_Identity=29.4820717131474, Blast_Score=104, Evalue=5e-23, Organism=Drosophila melanogaster, GI23397609, Length=241, Percent_Identity=32.3651452282158, Blast_Score=102, Evalue=2e-22, Organism=Drosophila melanogaster, GI28571526, Length=251, Percent_Identity=30.6772908366534, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24644339, Length=247, Percent_Identity=30.3643724696356, Blast_Score=95, Evalue=5e-20, Organism=Drosophila melanogaster, GI21355319, Length=248, Percent_Identity=30.6451612903226, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI24644337, Length=188, Percent_Identity=31.3829787234043, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI18859837, Length=188, Percent_Identity=32.9787234042553, Blast_Score=77, Evalue=8e-15, Organism=Drosophila melanogaster, GI24643142, Length=247, Percent_Identity=27.1255060728745, Blast_Score=67, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 27495; Mature: 27495
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDRKDQLAIVTGAAGDIGRAIAAALSESHKKVVLVDIDADALSDALYKLSGPGFVAKTC CCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHCCCCCCEEEEC DVTDPQDLARLAAEVAEFGEVATLVNNAGAARAVSLHDTTAEIWRKDNALNLEAPFLCFR CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCCCCCCHHHHHHH AFEEALKRTQGSVINITSVNGMAVFGHPAYSAAKAGLIHLTKLIAVEYGKFGIRANAVAP HHHHHHHHHCCCEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCC GTVRTQAWEARAATNPQVFEEAKHWYPLQRIVRPEDVANAVAFLAGPQAAAISGVCLPVD CCCCHHHHHHHCCCCHHHHHHHHHHCHHHHHCCHHHHHHHHHHHCCCCHHHHCCEEEEEE CGLTAGQAPLARTFSQSEHY CCCCCCCCHHHHHHHHCCCC >Mature Secondary Structure MNDRKDQLAIVTGAAGDIGRAIAAALSESHKKVVLVDIDADALSDALYKLSGPGFVAKTC CCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHCCCCCCEEEEC DVTDPQDLARLAAEVAEFGEVATLVNNAGAARAVSLHDTTAEIWRKDNALNLEAPFLCFR CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCCCCCCHHHHHHH AFEEALKRTQGSVINITSVNGMAVFGHPAYSAAKAGLIHLTKLIAVEYGKFGIRANAVAP HHHHHHHHHCCCEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCC GTVRTQAWEARAATNPQVFEEAKHWYPLQRIVRPEDVANAVAFLAGPQAAAISGVCLPVD CCCCHHHHHHHCCCCHHHHHHHHHHCHHHHHCCHHHHHHHHHHHCCCCHHHHCCEEEEEE CGLTAGQAPLARTFSQSEHY CCCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]