Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is mhqO [H]
Identifier: 159185222
GI number: 159185222
Start: 2424158
End: 2425102
Strand: Reverse
Name: mhqO [H]
Synonym: Atu2453
Alternate gene names: 159185222
Gene position: 2425102-2424158 (Counterclockwise)
Preceding gene: 15889725
Following gene: 159185221
Centisome position: 85.34
GC content: 61.69
Gene sequence:
>945_bases ATGCTCAACCAGATCAAGGGCCTGCACCACGTCACCTCGATGGCAGCCAGTGCGCGCCAGAACAATGGCTTTTTCACCGA TACGCTCGGCCTGCGCCGGGTGAAGAAAACGGTCAATTTCGACGCGCCTGACGTCTATCACCTCTATTATGGCGATGAAG CCGGCACGCCCGGCTCCGTCATGACCTATTTTCCGTTCCCGCATATTGCCCGCGGCCGCCCCGGCACCGGGGAGGTGGGG ACGACGCTGTTTTCCGTTCCGGAAGGATCGCTCGGCTACTGGCAGGACCGCCTTTCCAAGGCCGGCGTCGATGGCCTGAA ATCGGACGACGCTTTCGGCAACAAGCGCCTGCATTTCGCGGGCCCAGACGGCGACGGTTTTGCGCTGGTAGAGGTCAGGG ACGATACCCGCGCACAGTGGACCGGCAATGGCGTCGGCGAGGATCAGGCGATCCGTGGTTTTCAGGGTGCTTCGCTGCGG CTTCGCGACGAAGGCGCGACCGCCGAACTCCTGAAATTCATGGGTTACGAGGAAGTGGACCGTCAGGACGGCGTTCTGCG TCTCGGTATGCCCGGCGGTAACGGTGCCGATGTCATCGATATCGAAACCATGCCGAATATATCAGGCGCAAGGCTGGGTG CCGGTTCCGTGCACCACATCGCCTTTGCGGTCGAAAACCGTGAAAAGCAGCTGGAAGTGCGCAAGGCGCTGATGGATACG GGTTACCAGGTGACGCCGGTCATCGACCGCGATTATTTCTGGGCGATCTATTTCCGCACGCCGGGCGGCGTGCTGTTCGA GGTGGCCACCAACGAGCCCGGTTTCGACCGTGACGAGGACACCGCCCATCTCGGCGAGGCGCTGAAGCTGCCAAGCCAGC ACGCGCATCTGCGTGCCGCGCTGGAAAAGCAGCTGGAACCGCTTGGGGATGAAAAGACGGTTTAA
Upstream 100 bases:
>100_bases CTGTCGTCCACTCTATGCCTGAGGCGGCTCTTACCCCATCTTAACGCCATGAACAGGGCAGGCCCGATTGCGAGGCCTGC CGGCGAAAAGGGGTTTAATC
Downstream 100 bases:
>100_bases TTGCCAGGGACTTGGCCGCCCGTTTCTTCTCCCCGTCCGGGGAGAAGGTGGCCCGAAGGGTCGGATGAGGGGGCACCATT GCCGTATCTCACTACCCTTG
Product: aromatic compounds dioxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MLNQIKGLHHVTSMAASARQNNGFFTDTLGLRRVKKTVNFDAPDVYHLYYGDEAGTPGSVMTYFPFPHIARGRPGTGEVG TTLFSVPEGSLGYWQDRLSKAGVDGLKSDDAFGNKRLHFAGPDGDGFALVEVRDDTRAQWTGNGVGEDQAIRGFQGASLR LRDEGATAELLKFMGYEEVDRQDGVLRLGMPGGNGADVIDIETMPNISGARLGAGSVHHIAFAVENREKQLEVRKALMDT GYQVTPVIDRDYFWAIYFRTPGGVLFEVATNEPGFDRDEDTAHLGEALKLPSQHAHLRAALEKQLEPLGDEKTV
Sequences:
>Translated_314_residues MLNQIKGLHHVTSMAASARQNNGFFTDTLGLRRVKKTVNFDAPDVYHLYYGDEAGTPGSVMTYFPFPHIARGRPGTGEVG TTLFSVPEGSLGYWQDRLSKAGVDGLKSDDAFGNKRLHFAGPDGDGFALVEVRDDTRAQWTGNGVGEDQAIRGFQGASLR LRDEGATAELLKFMGYEEVDRQDGVLRLGMPGGNGADVIDIETMPNISGARLGAGSVHHIAFAVENREKQLEVRKALMDT GYQVTPVIDRDYFWAIYFRTPGGVLFEVATNEPGFDRDEDTAHLGEALKLPSQHAHLRAALEKQLEPLGDEKTV >Mature_314_residues MLNQIKGLHHVTSMAASARQNNGFFTDTLGLRRVKKTVNFDAPDVYHLYYGDEAGTPGSVMTYFPFPHIARGRPGTGEVG TTLFSVPEGSLGYWQDRLSKAGVDGLKSDDAFGNKRLHFAGPDGDGFALVEVRDDTRAQWTGNGVGEDQAIRGFQGASLR LRDEGATAELLKFMGYEEVDRQDGVLRLGMPGGNGADVIDIETMPNISGARLGAGSVHHIAFAVENREKQLEVRKALMDT GYQVTPVIDRDYFWAIYFRTPGGVLFEVATNEPGFDRDEDTAHLGEALKLPSQHAHLRAALEKQLEPLGDEKTV
Specific function: Putative ring-cleavage dioxygenase that may contribute to the degradation of aromatic compounds (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the extradiol ring-cleavage dioxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: NA
Molecular weight: Translated: 34340; Mature: 34340
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNQIKGLHHVTSMAASARQNNGFFTDTLGLRRVKKTVNFDAPDVYHLYYGDEAGTPGSV CCCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCE MTYFPFPHIARGRPGTGEVGTTLFSVPEGSLGYWQDRLSKAGVDGLKSDDAFGNKRLHFA EEECCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEE GPDGDGFALVEVRDDTRAQWTGNGVGEDQAIRGFQGASLRLRDEGATAELLKFMGYEEVD CCCCCCEEEEEECCCCCEEECCCCCCCHHHHCCCCCCEEEEECCCCHHHHHHHCCCHHCC RQDGVLRLGMPGGNGADVIDIETMPNISGARLGAGSVHHIAFAVENREKQLEVRKALMDT CCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHC GYQVTPVIDRDYFWAIYFRTPGGVLFEVATNEPGFDRDEDTAHLGEALKLPSQHAHLRAA CCEEEEEECCCEEEEEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHHH LEKQLEPLGDEKTV HHHHHCCCCCCCCC >Mature Secondary Structure MLNQIKGLHHVTSMAASARQNNGFFTDTLGLRRVKKTVNFDAPDVYHLYYGDEAGTPGSV CCCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCE MTYFPFPHIARGRPGTGEVGTTLFSVPEGSLGYWQDRLSKAGVDGLKSDDAFGNKRLHFA EEECCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEE GPDGDGFALVEVRDDTRAQWTGNGVGEDQAIRGFQGASLRLRDEGATAELLKFMGYEEVD CCCCCCEEEEEECCCCCEEECCCCCCCHHHHCCCCCCEEEEECCCCHHHHHHHCCCHHCC RQDGVLRLGMPGGNGADVIDIETMPNISGARLGAGSVHHIAFAVENREKQLEVRKALMDT CCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHC GYQVTPVIDRDYFWAIYFRTPGGVLFEVATNEPGFDRDEDTAHLGEALKLPSQHAHLRAA CCEEEEEECCCEEEEEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHHH LEKQLEPLGDEKTV HHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]