Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185213
Identifier: 159185213
GI number: 159185213
Start: 2403813
End: 2404082
Strand: Reverse
Name: 159185213
Synonym: Atu2432
Alternate gene names: NA
Gene position: 2404082-2403813 (Counterclockwise)
Preceding gene: 159185214
Following gene: 15889697
Centisome position: 84.6
GC content: 62.22
Gene sequence:
>270_bases ATGAGCCGGAGGCTTTTACGCGCACGCGCCCCGTGCGGGTGCGGGCGTCAACGCAGGGAGGAAAAAATGGCCCGCCAATT TATCGATTGCCGTGAATTTCCCAGTGACAGCAAATGCACGATCGCCATCTCCGCCGATTCTCAGGAAGAGCTTCTGGAGG CGGCCGTGCAGCACGCCGTTGCGGTGCACGGCGCGAAGGATACGCTCGAATTCCGTGAGGAAGTGCGCCGGAGCATGCAT GCCGGAACGCCGCCCTTGAAGGTGGCGTGA
Upstream 100 bases:
>100_bases CTTTTTGCCTTGCCGCGTGGCCGGTGTCTCCCGCCTGGAGGCGACCCCGATTTCGATTGTCCGGGGTTGGGGAAAGGCGT ATTTTGAGGGGGTTCCGACC
Downstream 100 bases:
>100_bases CGAGGTAGGTCAAGAATACGCAGTATTGGTAACTGTAGAAGGATCGAGCGGCTGCCACTTGTTTCTTCTCCCCGCCGGGG AGAAGAAAGATCCGGCGACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MSRRLLRARAPCGCGRQRREEKMARQFIDCREFPSDSKCTIAISADSQEELLEAAVQHAVAVHGAKDTLEFREEVRRSMH AGTPPLKVA
Sequences:
>Translated_89_residues MSRRLLRARAPCGCGRQRREEKMARQFIDCREFPSDSKCTIAISADSQEELLEAAVQHAVAVHGAKDTLEFREEVRRSMH AGTPPLKVA >Mature_88_residues SRRLLRARAPCGCGRQRREEKMARQFIDCREFPSDSKCTIAISADSQEELLEAAVQHAVAVHGAKDTLEFREEVRRSMHA GTPPLKVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10009; Mature: 9877
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRLLRARAPCGCGRQRREEKMARQFIDCREFPSDSKCTIAISADSQEELLEAAVQHAV CCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHH AVHGAKDTLEFREEVRRSMHAGTPPLKVA HHCCCHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SRRLLRARAPCGCGRQRREEKMARQFIDCREFPSDSKCTIAISADSQEELLEAAVQHAV CCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHH AVHGAKDTLEFREEVRRSMHAGTPPLKVA HHCCCHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA