Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185214
Identifier: 159185214
GI number: 159185214
Start: 2406537
End: 2407454
Strand: Reverse
Name: 159185214
Synonym: Atu2436
Alternate gene names: NA
Gene position: 2407454-2406537 (Counterclockwise)
Preceding gene: 159185215
Following gene: 159185213
Centisome position: 84.72
GC content: 61.0
Gene sequence:
>918_bases CTGTGGTATCCGGCCGCGTCCTCGGGCAAAACCGAGACCGTGGGAGAAAACGCGGCCATTTATGGCCTTGAAGTGCAGCC CGCTGCGCCATTCCTCGCGGGATCTCACCCTGTTGTCCTGATATCGCACGGTTTCGGCGGAAGCTGGCGTAATCTCAACT GGATTGCCGGCGTGCTTGTGCAGCAGGGCTATGTGGTGGCTGCCCCTGACCATAACGGCGAATCATTTACCGAGGCCAAT GCGACCGAGATCGTTCCGTTATGGGAGCGACCGCGCGACATCAGCCGAACGCTGACGGCATTGCTTGATCGTGATGATCT TGCGGGCAGGATCGATAGCCAGCGAATCGCCGTGATCGGCCATTCTCTCGGCGGCTGGACCGCGATGGAGCTGGCAGGCG CCCGATACAGTGCCGATCTTGCCCTGAAGGATTGCAACACGGAGAAGCTGCCGCCGCAATGCAAGGCGCCGCGATTGCTG GGCAAGGTCGGCATTGTCGGTGGCGGTAAGGCCGATCCGCGTCTTTCGATGGATTGGCGCGATGCCCGCATCCGCGCCGT GATTGCGCTGGATCTCGGCCCGGCTGCCGGTTTTCTGCCGGAGACGCTGGAGCAGGTGAAGGTGCCGGTTCTAGTTCTGG CCGCAGGCGTGGAGACCCCGGAGATCGCCGCCATCAAGGCAGATTCGAAATATATTGCCGGGTATTTGCCCAAGGCGACG CGGGTGTACCGGGAAATACCGGATGCCAGCCATTTCAGCTTCATGCAGATCTGCAAGCCGAACGGCGAAAAAATCGTGGA GGAGCTTTCGCCGGGCGAGGGGTTCGTCTGCCGTAATGGCGGCGGCAGGGACCGTGCTGCCCTTCATGCAGAGATTGCCG ATGCAATCCTCGGCTTCCTGAAAGCGGAAATGCGTTAA
Upstream 100 bases:
>100_bases CGTCCTTTCCACCCTTCGTGCCGCGATGGCGGACGGCGCCATCGGTTTCAAACAGACGGAATTGCCTGTTGATGCCGGCG GGCATGCGCTCACCATATCC
Downstream 100 bases:
>100_bases GATTTTTGAAGCGCTTCGGGGCTGTGGCGGCCCCGAAACCTTACGACTTTCAGGCGGTCTTGACCTGATGATAACGATAA ACGAGGTCCTCGGGGTCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MWYPAASSGKTETVGENAAIYGLEVQPAAPFLAGSHPVVLISHGFGGSWRNLNWIAGVLVQQGYVVAAPDHNGESFTEAN ATEIVPLWERPRDISRTLTALLDRDDLAGRIDSQRIAVIGHSLGGWTAMELAGARYSADLALKDCNTEKLPPQCKAPRLL GKVGIVGGGKADPRLSMDWRDARIRAVIALDLGPAAGFLPETLEQVKVPVLVLAAGVETPEIAAIKADSKYIAGYLPKAT RVYREIPDASHFSFMQICKPNGEKIVEELSPGEGFVCRNGGGRDRAALHAEIADAILGFLKAEMR
Sequences:
>Translated_305_residues MWYPAASSGKTETVGENAAIYGLEVQPAAPFLAGSHPVVLISHGFGGSWRNLNWIAGVLVQQGYVVAAPDHNGESFTEAN ATEIVPLWERPRDISRTLTALLDRDDLAGRIDSQRIAVIGHSLGGWTAMELAGARYSADLALKDCNTEKLPPQCKAPRLL GKVGIVGGGKADPRLSMDWRDARIRAVIALDLGPAAGFLPETLEQVKVPVLVLAAGVETPEIAAIKADSKYIAGYLPKAT RVYREIPDASHFSFMQICKPNGEKIVEELSPGEGFVCRNGGGRDRAALHAEIADAILGFLKAEMR >Mature_305_residues MWYPAASSGKTETVGENAAIYGLEVQPAAPFLAGSHPVVLISHGFGGSWRNLNWIAGVLVQQGYVVAAPDHNGESFTEAN ATEIVPLWERPRDISRTLTALLDRDDLAGRIDSQRIAVIGHSLGGWTAMELAGARYSADLALKDCNTEKLPPQCKAPRLL GKVGIVGGGKADPRLSMDWRDARIRAVIALDLGPAAGFLPETLEQVKVPVLVLAAGVETPEIAAIKADSKYIAGYLPKAT RVYREIPDASHFSFMQICKPNGEKIVEELSPGEGFVCRNGGGRDRAALHAEIADAILGFLKAEMR
Specific function: Unknown
COG id: COG4188
COG function: function code R; Predicted dienelactone hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32674; Mature: 32674
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWYPAASSGKTETVGENAAIYGLEVQPAAPFLAGSHPVVLISHGFGGSWRNLNWIAGVLV CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHH QQGYVVAAPDHNGESFTEANATEIVPLWERPRDISRTLTALLDRDDLAGRIDSQRIAVIG HCCEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHCCCCCCCEEEEEE HSLGGWTAMELAGARYSADLALKDCNTEKLPPQCKAPRLLGKVGIVGGGKADPRLSMDWR CCCCCEEHHHHCCCCEECCEEEECCCCCCCCCCCCCCHHHHHEEEECCCCCCCCCCCCCC DARIRAVIALDLGPAAGFLPETLEQVKVPVLVLAAGVETPEIAAIKADSKYIAGYLPKAT CCEEEEEEEEECCCCCCCCHHHHHHHCCCEEEEEECCCCCCEEEEECCCCEEEECCCHHH RVYREIPDASHFSFMQICKPNGEKIVEELSPGEGFVCRNGGGRDRAALHAEIADAILGFL HHHHHCCCCCCCHHHEEECCCHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHH KAEMR HHHCC >Mature Secondary Structure MWYPAASSGKTETVGENAAIYGLEVQPAAPFLAGSHPVVLISHGFGGSWRNLNWIAGVLV CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHH QQGYVVAAPDHNGESFTEANATEIVPLWERPRDISRTLTALLDRDDLAGRIDSQRIAVIG HCCEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHCCCCCCCEEEEEE HSLGGWTAMELAGARYSADLALKDCNTEKLPPQCKAPRLLGKVGIVGGGKADPRLSMDWR CCCCCEEHHHHCCCCEECCEEEECCCCCCCCCCCCCCHHHHHEEEECCCCCCCCCCCCCC DARIRAVIALDLGPAAGFLPETLEQVKVPVLVLAAGVETPEIAAIKADSKYIAGYLPKAT CCEEEEEEEEECCCCCCCCHHHHHHHCCCEEEEEECCCCCCEEEEECCCCEEEECCCHHH RVYREIPDASHFSFMQICKPNGEKIVEELSPGEGFVCRNGGGRDRAALHAEIADAILGFL HHHHHCCCCCCCHHHEEECCCHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHH KAEMR HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA