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The map label for this gene is ureD [H]

Identifier: 159185202

GI number: 159185202

Start: 2377168

End: 2377899

Strand: Reverse

Name: ureD [H]

Synonym: Atu2408

Alternate gene names: 159185202

Gene position: 2377899-2377168 (Counterclockwise)

Preceding gene: 159185203

Following gene: 159185201

Centisome position: 83.68

GC content: 62.16

Gene sequence:

>732_bases
CTGGACGAGTTGTTCCAGGAAGGCTGTGCCAAAATCCGCCTGCCGGACACGTTTTCGAACGAAGCCGAGGCCATTCTCAT
CAATTCCTCCGGCGGGCTGACCGGCGGAGACGACATAGAATGGCAGGCCACAGCCGGTGCCGGCACCTCGCTTGTCGTGA
CCACGCAGGCCTGCGAAAAGGTCTACAAGGCATCATCGGGCACAGCCACGGTTACCGCCCGCATTTCCGCCGGGCCGGGC
GCGAAACTGCACTGGCTGCCACAGGAAACCATCCTCTTCGACCGGGCATCGCTCAACCGCCGGCTGGAGGCCGATCTCGA
CCAATCCTCCGAATTTATCGCTGTCGAAGCCGTGCTGCTTGGCCGCCAGGCCATGGGCGAGGCGATGACACACGGGCTTT
TCCGTGACCGCTGGCGCATTCGCCATGGGGGCAGGCTGGTGCATGCGGAAGAATTGCTGCTTGAGGGCGAGGTGGCGGAG
TTGACCGCGAAACCGGCGGTGCTGGCCGGTCAGGTGGCGTTCGCCACGCTGCTTTACATCGGGCCTCTCTCCGAGGCGCT
TCTGCCTAAAATCCGGGCTATTGCCGGTGAAAGCGGCGGGGCCAGCGAATGGCAGGGCAAGCTTGTCGTGCGTGTGTCAG
CCGCAGACGGTTTCTCCCTCAGAAAATTGCTTTTTCCGATCATTTCGCTCTTGCGAAACGGCGCGCCAGTGCCGAAAGTC
TGGAATCTGTAA

Upstream 100 bases:

>100_bases
CGGCGCTTCCGGTTGTGAAGACGCTCAACAACCTGTCCGGCAGCAGCGCGCCCGTGGCAGAGGACGCATTGTAACCAAGG
CGGTTGAAGGGCGCAGCCGG

Downstream 100 bases:

>100_bases
ACCCTTCGGATCGTCGGCAACCGGCGTCCTTCGGGGTCTGTCAAATGTCGGATCTGATCTCCCGCAAACCTGCTTTGCGG
AGCAGATGCCAAGCTGCGGG

Product: urease accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MDELFQEGCAKIRLPDTFSNEAEAILINSSGGLTGGDDIEWQATAGAGTSLVVTTQACEKVYKASSGTATVTARISAGPG
AKLHWLPQETILFDRASLNRRLEADLDQSSEFIAVEAVLLGRQAMGEAMTHGLFRDRWRIRHGGRLVHAEELLLEGEVAE
LTAKPAVLAGQVAFATLLYIGPLSEALLPKIRAIAGESGGASEWQGKLVVRVSAADGFSLRKLLFPIISLLRNGAPVPKV
WNL

Sequences:

>Translated_243_residues
MDELFQEGCAKIRLPDTFSNEAEAILINSSGGLTGGDDIEWQATAGAGTSLVVTTQACEKVYKASSGTATVTARISAGPG
AKLHWLPQETILFDRASLNRRLEADLDQSSEFIAVEAVLLGRQAMGEAMTHGLFRDRWRIRHGGRLVHAEELLLEGEVAE
LTAKPAVLAGQVAFATLLYIGPLSEALLPKIRAIAGESGGASEWQGKLVVRVSAADGFSLRKLLFPIISLLRNGAPVPKV
WNL
>Mature_243_residues
MDELFQEGCAKIRLPDTFSNEAEAILINSSGGLTGGDDIEWQATAGAGTSLVVTTQACEKVYKASSGTATVTARISAGPG
AKLHWLPQETILFDRASLNRRLEADLDQSSEFIAVEAVLLGRQAMGEAMTHGLFRDRWRIRHGGRLVHAEELLLEGEVAE
LTAKPAVLAGQVAFATLLYIGPLSEALLPKIRAIAGESGGASEWQGKLVVRVSAADGFSLRKLLFPIISLLRNGAPVPKV
WNL

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: COG0829

COG function: function code O; Urease accessory protein UreH

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002669 [H]

Pfam domain/function: PF01774 UreD [H]

EC number: NA

Molecular weight: Translated: 25987; Mature: 25987

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDELFQEGCAKIRLPDTFSNEAEAILINSSGGLTGGDDIEWQATAGAGTSLVVTTQACEK
CCHHHHHCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCEEEEEHHHHHH
VYKASSGTATVTARISAGPGAKLHWLPQETILFDRASLNRRLEADLDQSSEFIAVEAVLL
HHHCCCCCEEEEEEEECCCCCEEEECCCHHEEEEHHHHCCHHHCCCCCCCCEEEEHHHHH
GRQAMGEAMTHGLFRDRWRIRHGGRLVHAEELLLEGEVAELTAKPAVLAGQVAFATLLYI
HHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHH
GPLSEALLPKIRAIAGESGGASEWQGKLVVRVSAADGFSLRKLLFPIISLLRNGAPVPKV
CCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCC
WNL
CCC
>Mature Secondary Structure
MDELFQEGCAKIRLPDTFSNEAEAILINSSGGLTGGDDIEWQATAGAGTSLVVTTQACEK
CCHHHHHCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCEEEEEHHHHHH
VYKASSGTATVTARISAGPGAKLHWLPQETILFDRASLNRRLEADLDQSSEFIAVEAVLL
HHHCCCCCEEEEEEEECCCCCEEEECCCHHEEEEHHHHCCHHHCCCCCCCCEEEEHHHHH
GRQAMGEAMTHGLFRDRWRIRHGGRLVHAEELLLEGEVAELTAKPAVLAGQVAFATLLYI
HHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHH
GPLSEALLPKIRAIAGESGGASEWQGKLVVRVSAADGFSLRKLLFPIISLLRNGAPVPKV
CCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCC
WNL
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]