Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 159185203

Identifier: 159185203

GI number: 159185203

Start: 2377926

End: 2379182

Strand: Reverse

Name: 159185203

Synonym: Atu2409

Alternate gene names: NA

Gene position: 2379182-2377926 (Counterclockwise)

Preceding gene: 15889681

Following gene: 159185202

Centisome position: 83.73

GC content: 62.13

Gene sequence:

>1257_bases
ATGCATCAAGACTTTGCAACTGGCCGGGCTGCCCGGCTGTTCCGCTCCGCCCGCACCCTGGTTCTCGGCCTTGCGATGTG
CGCGAGCGCCGGCGTCGCAGCGTCGGCATCGACCTGCGGCCAGCTTCCCGGACCTGGCATGGAGCCGGGCCGGCATGATT
TTTCCATTCTCTCCAACGGTGAGAAACGCGACGGCGTCTATTTTGTTCCATCGGCCTATGATGGAAAAAAGCCGCTGCCG
GTCGTCTTTGATTTCCATGGCTCCAACAGCAACCCGCATGGGCAGCTGAACCGCAGCGGCTGGGACAAGCTTGCCGAGCG
CGACGGCCTGATGGTCGTGGCGCTGGCCGGTAGCCTCAATGGCGAATTGCCCGGCACCCATGCCTGGAACGTTCCCGGTG
TCACCAAACGTCCGGGCGGGCTGGATGAAGTCGGCTTCATCCGCGATGCCATCACCATGGTGAAGGGCAAGTTCTGCGTG
GATGAGGAGCGCTTTTACGGTTCCGGTTATTCCGGCGGCGGGCGCATGCTGTCGCAATTCATCTGCAGCGGCAACGCGGA
TTTTAACGCTGCCGGTTTCGTCGCTTCGCTCCGCGCCGGTTATCCGCTGGAGACTGAAGGCAGGTGGGGACCGGATGCGG
CAAGCTGCAAACCGGCGCGGCCGATGTCGATCATTGCATTTGCCGGTCTGAAGGATCCGGCCAATCCCTATCAGGGTGGT
GGCAAGTCCTATTGGCAATATAGCGGCGAGACGGCGCTGAAGCGCTGGGCCGAAATGGACGGCTGCAAGGGCGGCGCAAA
AACCAAGCCGGGTGAGAGTTTTACCGTTAATTCCTATGACGTCTGCAAGGCTGGCGCGCGTATTCAGTCCTATGTCATCG
AGAACTGGGACCATGCCTGGCCGCGCGCCACCATGAAGGCGGAAGTGCTGGCCGCGAGCGCCGTCGTCACCCGCAAGCCG
GGCGGCGAGCAGACGCCGAAGGCTGAACCTGCCGTGGAGCGCAAGATGCCCACAGGCGAAGTGACGCGCACAGTTGATGC
GGCCGAAAGAATGTGGGATTTCTTCCGCAACACGGAAGGACAGATGGTGGTGGACGCCGTCGTCAAGAAGGATTGCGGCA
CCAAGGCCAATTCCGCTTCCGCAAGCGCTTCGGAGACCGCGTGCAGTCAGAACAGCAAGCCATCGGCGCTTCCGGTTGTG
AAGACGCTCAACAACCTGTCCGGCAGCAGCGCGCCCGTGGCAGAGGACGCATTGTAA

Upstream 100 bases:

>100_bases
ACACAGGAAAAGTCTATTCGCACGCCGCGACAGTTGATCCCTTACATTCCATGCACCTCCGACGTATCGTTGGAGACATA
GTGCCAATAAAGGCGTGTCA

Downstream 100 bases:

>100_bases
CCAAGGCGGTTGAAGGGCGCAGCCGGCTGGACGAGTTGTTCCAGGAAGGCTGTGCCAAAATCCGCCTGCCGGACACGTTT
TCGAACGAAGCCGAGGCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: Secreted Esterase; Esterase/Lipase/Thioesterase; Secreted Hydrolase; Hydrolase; Poly(3-Hydroxyalkanoate) Depolymerase; Feruloyl Esterase

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MHQDFATGRAARLFRSARTLVLGLAMCASAGVAASASTCGQLPGPGMEPGRHDFSILSNGEKRDGVYFVPSAYDGKKPLP
VVFDFHGSNSNPHGQLNRSGWDKLAERDGLMVVALAGSLNGELPGTHAWNVPGVTKRPGGLDEVGFIRDAITMVKGKFCV
DEERFYGSGYSGGGRMLSQFICSGNADFNAAGFVASLRAGYPLETEGRWGPDAASCKPARPMSIIAFAGLKDPANPYQGG
GKSYWQYSGETALKRWAEMDGCKGGAKTKPGESFTVNSYDVCKAGARIQSYVIENWDHAWPRATMKAEVLAASAVVTRKP
GGEQTPKAEPAVERKMPTGEVTRTVDAAERMWDFFRNTEGQMVVDAVVKKDCGTKANSASASASETACSQNSKPSALPVV
KTLNNLSGSSAPVAEDAL

Sequences:

>Translated_418_residues
MHQDFATGRAARLFRSARTLVLGLAMCASAGVAASASTCGQLPGPGMEPGRHDFSILSNGEKRDGVYFVPSAYDGKKPLP
VVFDFHGSNSNPHGQLNRSGWDKLAERDGLMVVALAGSLNGELPGTHAWNVPGVTKRPGGLDEVGFIRDAITMVKGKFCV
DEERFYGSGYSGGGRMLSQFICSGNADFNAAGFVASLRAGYPLETEGRWGPDAASCKPARPMSIIAFAGLKDPANPYQGG
GKSYWQYSGETALKRWAEMDGCKGGAKTKPGESFTVNSYDVCKAGARIQSYVIENWDHAWPRATMKAEVLAASAVVTRKP
GGEQTPKAEPAVERKMPTGEVTRTVDAAERMWDFFRNTEGQMVVDAVVKKDCGTKANSASASASETACSQNSKPSALPVV
KTLNNLSGSSAPVAEDAL
>Mature_418_residues
MHQDFATGRAARLFRSARTLVLGLAMCASAGVAASASTCGQLPGPGMEPGRHDFSILSNGEKRDGVYFVPSAYDGKKPLP
VVFDFHGSNSNPHGQLNRSGWDKLAERDGLMVVALAGSLNGELPGTHAWNVPGVTKRPGGLDEVGFIRDAITMVKGKFCV
DEERFYGSGYSGGGRMLSQFICSGNADFNAAGFVASLRAGYPLETEGRWGPDAASCKPARPMSIIAFAGLKDPANPYQGG
GKSYWQYSGETALKRWAEMDGCKGGAKTKPGESFTVNSYDVCKAGARIQSYVIENWDHAWPRATMKAEVLAASAVVTRKP
GGEQTPKAEPAVERKMPTGEVTRTVDAAERMWDFFRNTEGQMVVDAVVKKDCGTKANSASASASETACSQNSKPSALPVV
KTLNNLSGSSAPVAEDAL

Specific function: Unknown

COG id: COG3509

COG function: function code Q; Poly(3-hydroxybutyrate) depolymerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44293; Mature: 44293

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHQDFATGRAARLFRSARTLVLGLAMCASAGVAASASTCGQLPGPGMEPGRHDFSILSNG
CCCCHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCHHHHCCC
EKRDGVYFVPSAYDGKKPLPVVFDFHGSNSNPHGQLNRSGWDKLAERDGLMVVALAGSLN
CCCCCEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCC
GELPGTHAWNVPGVTKRPGGLDEVGFIRDAITMVKGKFCVDEERFYGSGYSGGGRMLSQF
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECHHHHCCCCCCCHHHHHHHH
ICSGNADFNAAGFVASLRAGYPLETEGRWGPDAASCKPARPMSIIAFAGLKDPANPYQGG
HHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC
GKSYWQYSGETALKRWAEMDGCKGGAKTKPGESFTVNSYDVCKAGARIQSYVIENWDHAW
CCCCEEECCHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCC
PRATMKAEVLAASAVVTRKPGGEQTPKAEPAVERKMPTGEVTRTVDAAERMWDFFRNTEG
CCHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC
QMVVDAVVKKDCGTKANSASASASETACSQNSKPSALPVVKTLNNLSGSSAPVAEDAL
CCHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHCCC
>Mature Secondary Structure
MHQDFATGRAARLFRSARTLVLGLAMCASAGVAASASTCGQLPGPGMEPGRHDFSILSNG
CCCCHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCHHHHCCC
EKRDGVYFVPSAYDGKKPLPVVFDFHGSNSNPHGQLNRSGWDKLAERDGLMVVALAGSLN
CCCCCEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCC
GELPGTHAWNVPGVTKRPGGLDEVGFIRDAITMVKGKFCVDEERFYGSGYSGGGRMLSQF
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECHHHHCCCCCCCHHHHHHHH
ICSGNADFNAAGFVASLRAGYPLETEGRWGPDAASCKPARPMSIIAFAGLKDPANPYQGG
HHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC
GKSYWQYSGETALKRWAEMDGCKGGAKTKPGESFTVNSYDVCKAGARIQSYVIENWDHAW
CCCCEEECCHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCC
PRATMKAEVLAASAVVTRKPGGEQTPKAEPAVERKMPTGEVTRTVDAAERMWDFFRNTEG
CCHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC
QMVVDAVVKKDCGTKANSASASASETACSQNSKPSALPVVKTLNNLSGSSAPVAEDAL
CCHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA