Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is ureA
Identifier: 159185201
GI number: 159185201
Start: 2376759
End: 2377061
Strand: Reverse
Name: ureA
Synonym: Atu2407
Alternate gene names: 159185201
Gene position: 2377061-2376759 (Counterclockwise)
Preceding gene: 159185202
Following gene: 15889676
Centisome position: 83.65
GC content: 59.08
Gene sequence:
>303_bases ATGAATCTTAGCCCAAGAGAAAAAGACAAGCTGCTGATTTCCATGGCCGCCATGGTGGCGCGCCGCCGACTGGAGCGCGG CGTGAAGCTCAACTATCCCGAAGCGATTGCGCTGATTAGCGATTTCGTCGTCGAGGGCGCCCGTGATGGCCGCGCCGTTG CCGATCTGATGGAAGCCGGTGCGCATGTCATTTCCCGCGATCAGGTGATGGATGGCATTGCCGATATGATCCATGATGTG CAGGTGGAAGCGACCTTCCCCGACGGCACCAAGCTGGTGACCGTTCACGAACCGATCCGCTGA
Upstream 100 bases:
>100_bases CGGATCGTCGGCAACCGGCGTCCTTCGGGGTCTGTCAAATGTCGGATCTGATCTCCCGCAAACCTGCTTTGCGGAGCAGA TGCCAAGCTGCGGGACGACG
Downstream 100 bases:
>100_bases GGGGATGATATGGCGCTGGAGCTTCGGCCCAATTGCGAATGTTGCGACCGTGATCTTGCGCCCCATAGCCGGGATGCGAT GATCTGCTCGTTCGAATGCA
Product: urease subunit gamma
Products: NA
Alternate protein names: Urea amidohydrolase subunit gamma
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MNLSPREKDKLLISMAAMVARRRLERGVKLNYPEAIALISDFVVEGARDGRAVADLMEAGAHVISRDQVMDGIADMIHDV QVEATFPDGTKLVTVHEPIR
Sequences:
>Translated_100_residues MNLSPREKDKLLISMAAMVARRRLERGVKLNYPEAIALISDFVVEGARDGRAVADLMEAGAHVISRDQVMDGIADMIHDV QVEATFPDGTKLVTVHEPIR >Mature_100_residues MNLSPREKDKLLISMAAMVARRRLERGVKLNYPEAIALISDFVVEGARDGRAVADLMEAGAHVISRDQVMDGIADMIHDV QVEATFPDGTKLVTVHEPIR
Specific function: Unknown
COG id: COG0831
COG function: function code E; Urea amidohydrolase (urease) gamma subunit
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the urease gamma subunit family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): URE3_AGRT5 (Q8UCS6)
Other databases:
- EMBL: AE007869 - PIR: AE2872 - PIR: F97648 - RefSeq: NP_355358.2 - ProteinModelPortal: Q8UCS6 - SMR: Q8UCS6 - STRING: Q8UCS6 - GeneID: 1134445 - GenomeReviews: AE007869_GR - KEGG: atu:Atu2407 - eggNOG: COG0831 - HOGENOM: HBG286300 - OMA: HERDKLL - ProtClustDB: PRK13241 - BioCyc: ATUM176299-1:ATU2407-MONOMER - GO: GO:0005737 - HAMAP: MF_00739 - InterPro: IPR002026 - InterPro: IPR012010 - Gene3D: G3DSA:3.30.280.10 - PIRSF: PIRSF001223 - ProDom: PD002319 - TIGRFAMs: TIGR00193
Pfam domain/function: PF00547 Urease_gamma; SSF54111 Urease_gamma_reg
EC number: =3.5.1.5
Molecular weight: Translated: 11040; Mature: 11040
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLSPREKDKLLISMAAMVARRRLERGVKLNYPEAIALISDFVVEGARDGRAVADLMEAG CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH AHVISRDQVMDGIADMIHDVQVEATFPDGTKLVTVHEPIR HHHHHHHHHHHHHHHHHHHCEEEEECCCCCEEEEECCCCC >Mature Secondary Structure MNLSPREKDKLLISMAAMVARRRLERGVKLNYPEAIALISDFVVEGARDGRAVADLMEAG CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH AHVISRDQVMDGIADMIHDVQVEATFPDGTKLVTVHEPIR HHHHHHHHHHHHHHHHHHHCEEEEECCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194