Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 15889676

Identifier: 15889676

GI number: 15889676

Start: 2376492

End: 2376749

Strand: Reverse

Name: 15889676

Synonym: Atu2406

Alternate gene names: NA

Gene position: 2376749-2376492 (Counterclockwise)

Preceding gene: 159185201

Following gene: 159185200

Centisome position: 83.64

GC content: 65.12

Gene sequence:

>258_bases
ATGGCGCTGGAGCTTCGGCCCAATTGCGAATGTTGCGACCGTGATCTTGCGCCCCATAGCCGGGATGCGATGATCTGCTC
GTTCGAATGCACCTTTTGCGCCGATTGCGCGAGCGACGTGCTTCACGGTGCCTGCCCGAATTGCGGCGGCGAACTGGTCC
GCAGGCCGGTCCGCCCGGCGGCAAAACTCGTTAACAACCCAGCGTCGACACGGCGCGTCCTGAAGGCCGAAGGCTGCGCA
GCCGCGACTGCCGCCTGA

Upstream 100 bases:

>100_bases
TGGCATTGCCGATATGATCCATGATGTGCAGGTGGAAGCGACCTTCCCCGACGGCACCAAGCTGGTGACCGTTCACGAAC
CGATCCGCTGAGGGGATGAT

Downstream 100 bases:

>100_bases
GACAGAAATTAAGGGGAGCCCCATGAAGCCAGGCGAAATCATTGCCGCAGAAGGCACCATCGAACTTAATGCCGGCCAGC
CGACGGTGACGATCGAGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 84

Protein sequence:

>85_residues
MALELRPNCECCDRDLAPHSRDAMICSFECTFCADCASDVLHGACPNCGGELVRRPVRPAAKLVNNPASTRRVLKAEGCA
AATAA

Sequences:

>Translated_85_residues
MALELRPNCECCDRDLAPHSRDAMICSFECTFCADCASDVLHGACPNCGGELVRRPVRPAAKLVNNPASTRRVLKAEGCA
AATAA
>Mature_84_residues
ALELRPNCECCDRDLAPHSRDAMICSFECTFCADCASDVLHGACPNCGGELVRRPVRPAAKLVNNPASTRRVLKAEGCAA
ATAA

Specific function: Unknown

COG id: COG3813

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010696
- InterPro:   IPR013083 [H]

Pfam domain/function: PF06906 DUF1272 [H]

EC number: NA

Molecular weight: Translated: 8993; Mature: 8862

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

11.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
14.1 %Cys+Met (Translated Protein)
11.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
13.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALELRPNCECCDRDLAPHSRDAMICSFECTFCADCASDVLHGACPNCGGELVRRPVRPA
CCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHCCCHHH
AKLVNNPASTRRVLKAEGCAAATAA
HHHHCCCHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
ALELRPNCECCDRDLAPHSRDAMICSFECTFCADCASDVLHGACPNCGGELVRRPVRPA
CCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHCCCHHH
AKLVNNPASTRRVLKAEGCAAATAA
HHHHCCCHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8121412; 11481430 [H]