Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 159185163

Identifier: 159185163

GI number: 159185163

Start: 2315968

End: 2317362

Strand: Direct

Name: 159185163

Synonym: Atu2338

Alternate gene names: NA

Gene position: 2315968-2317362 (Clockwise)

Preceding gene: 15889610

Following gene: 15889616

Centisome position: 81.5

GC content: 59.35

Gene sequence:

>1395_bases
ATGATAAATGCGGACAACGCGCCGCGAAGCCCATATGAAAACTATAACGAATGGTACAGCCGGCAGGACAGGGCGCACCT
GATCCAGAAGTCAAAAGACGCGGAAAACATCTTTCGAAAAACCGGCATTACTTTCGCAGTCTACGGCCACGCCGACAGTT
CAGAAAAACTGATCCCCTTCGATATTATTCCGCGCATCATCTCCGGGCGTGAGTGGCGCAAACTGGCCCAGGGTATCGAA
CAGCGCGTTCTCGCCCTCAACGCTTTCCTTGACGACATCTACCACAAGCAGGAAATCATCCGCGCCGGCCGCATTCCCCG
GGAGATCATCGAGAAAAACGTCGCATTCCTGCCGGAAATGATCGGCTTCACGCCGCCTGGCGGCGTTTACACCCACATTG
TCGGCACGGATATCGTCCGCACCGGCGAAGACCAATTCTACGTCCTGGAAGACAATGCCCGCACGCCATCCGGTGTCAGC
TACATGCTGGAAAACCGCGAGACGATGATGCAGATGTTCCCCGAACTCTTCCATGAGAACAAGGTGCGGCGGGTCGAGGA
CTACCCCTATCAGCTGCGCCAGTCGCTCGCCTCGCTGGCACCGCCCGGCTGCACCGACAAGCCGCGCGTCGCCATCCTTA
CCCCCGGCATCTACAATTCCGCCTATTACGAACATTCCTTCCTCGCCGACATGATGGGCGTGGAGCTGGTGGAAGGGTCG
GACCTGCGCGTCATGGACGGCAAGGTCAAGATGCGCACCACGCGCGGTTACGAGGCGATCGACGTGCTCTACCGCCGCGT
CGATGACGACTTCCTTGATCCCTTGACCTTCCGGTCGGATTCGGCACTTGGCGTGCCCGGCATCATGGATGTTTATCGCG
CCGGCAACATCACCATCGCCAATGCCCCCGGCACCGGCATTTCCGACGACAAGGCAATCTATTCCTACATGCCTGAGATC
GTCGAATTCTATACCGGTCGCAAGCCGCTTCTCGAAAACGTGCCCACCTGGCGCTGTTCGGAGCCGGACAGCCTGAAATA
TGTGCTCGACAACCTTGCCGAACTGGTCGTCAAGGAAGTCCACGGTTCGGGCGGTTACGGCATGCTGGTCGGCCCCACCG
CGTCGAAGAAGGAACGGGCGCTGTTTGCCGAAAAGCTGAAAGCCCGCCCCTCCAACTACATCGCGCAGCCGACGCTGTCG
CTCTCCACCGTGCCGATCATGGTCAAGAACGGCATCGCGCCGCGCCATGTCGATCTGCGTCCCTATGTGCTGGTGTCGGA
CAAGGTGAAGATCATCCCCGGCGGCCTGACCCGCGTGGCCCTCAAGCAGGGTTCGCTGGTGGTCAATTCCAGCCAGGGCG
GCGGCACCAAGGATACATGGGTACTGGAGGATTAA

Upstream 100 bases:

>100_bases
GTAAAAAATCTTCACGGAGGCCTCCGCATAGTTCTTGCATTGCATTTCTCGTTGTATTCATATGGCAAAAAAGGGGACAT
CGAAGTTGGCATTTGACGAA

Downstream 100 bases:

>100_bases
GCCATGCTGGGCAGAACGGCAAACGGGCTCTACTGGATGTTCCGGTATATAGAGCGCGCTGAAAACATCGCCCGGCTGAT
CGATGCAGGCCTGCGCGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MINADNAPRSPYENYNEWYSRQDRAHLIQKSKDAENIFRKTGITFAVYGHADSSEKLIPFDIIPRIISGREWRKLAQGIE
QRVLALNAFLDDIYHKQEIIRAGRIPREIIEKNVAFLPEMIGFTPPGGVYTHIVGTDIVRTGEDQFYVLEDNARTPSGVS
YMLENRETMMQMFPELFHENKVRRVEDYPYQLRQSLASLAPPGCTDKPRVAILTPGIYNSAYYEHSFLADMMGVELVEGS
DLRVMDGKVKMRTTRGYEAIDVLYRRVDDDFLDPLTFRSDSALGVPGIMDVYRAGNITIANAPGTGISDDKAIYSYMPEI
VEFYTGRKPLLENVPTWRCSEPDSLKYVLDNLAELVVKEVHGSGGYGMLVGPTASKKERALFAEKLKARPSNYIAQPTLS
LSTVPIMVKNGIAPRHVDLRPYVLVSDKVKIIPGGLTRVALKQGSLVVNSSQGGGTKDTWVLED

Sequences:

>Translated_464_residues
MINADNAPRSPYENYNEWYSRQDRAHLIQKSKDAENIFRKTGITFAVYGHADSSEKLIPFDIIPRIISGREWRKLAQGIE
QRVLALNAFLDDIYHKQEIIRAGRIPREIIEKNVAFLPEMIGFTPPGGVYTHIVGTDIVRTGEDQFYVLEDNARTPSGVS
YMLENRETMMQMFPELFHENKVRRVEDYPYQLRQSLASLAPPGCTDKPRVAILTPGIYNSAYYEHSFLADMMGVELVEGS
DLRVMDGKVKMRTTRGYEAIDVLYRRVDDDFLDPLTFRSDSALGVPGIMDVYRAGNITIANAPGTGISDDKAIYSYMPEI
VEFYTGRKPLLENVPTWRCSEPDSLKYVLDNLAELVVKEVHGSGGYGMLVGPTASKKERALFAEKLKARPSNYIAQPTLS
LSTVPIMVKNGIAPRHVDLRPYVLVSDKVKIIPGGLTRVALKQGSLVVNSSQGGGTKDTWVLED
>Mature_464_residues
MINADNAPRSPYENYNEWYSRQDRAHLIQKSKDAENIFRKTGITFAVYGHADSSEKLIPFDIIPRIISGREWRKLAQGIE
QRVLALNAFLDDIYHKQEIIRAGRIPREIIEKNVAFLPEMIGFTPPGGVYTHIVGTDIVRTGEDQFYVLEDNARTPSGVS
YMLENRETMMQMFPELFHENKVRRVEDYPYQLRQSLASLAPPGCTDKPRVAILTPGIYNSAYYEHSFLADMMGVELVEGS
DLRVMDGKVKMRTTRGYEAIDVLYRRVDDDFLDPLTFRSDSALGVPGIMDVYRAGNITIANAPGTGISDDKAIYSYMPEI
VEFYTGRKPLLENVPTWRCSEPDSLKYVLDNLAELVVKEVHGSGGYGMLVGPTASKKERALFAEKLKARPSNYIAQPTLS
LSTVPIMVKNGIAPRHVDLRPYVLVSDKVKIIPGGLTRVALKQGSLVVNSSQGGGTKDTWVLED

Specific function: Unknown

COG id: COG2308

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis RV2411c [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007297
- InterPro:   IPR007302
- InterPro:   IPR016450 [H]

Pfam domain/function: PF04169 DUF404; PF04174 DUF407 [H]

EC number: NA

Molecular weight: Translated: 52092; Mature: 52092

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINADNAPRSPYENYNEWYSRQDRAHLIQKSKDAENIFRKTGITFAVYGHADSSEKLIPF
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEECCCCCCCCCCH
DIIPRIISGREWRKLAQGIEQRVLALNAFLDDIYHKQEIIRAGRIPREIIEKNVAFLPEM
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
IGFTPPGGVYTHIVGTDIVRTGEDQFYVLEDNARTPSGVSYMLENRETMMQMFPELFHEN
HCCCCCCCEEEEEECCHHEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
KVRRVEDYPYQLRQSLASLAPPGCTDKPRVAILTPGIYNSAYYEHSFLADMMGVELVEGS
CHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCEEECCC
DLRVMDGKVKMRTTRGYEAIDVLYRRVDDDFLDPLTFRSDSALGVPGIMDVYRAGNITIA
CEEEECCEEEEEECCCHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCHHHHHHHCCCEEEE
NAPGTGISDDKAIYSYMPEIVEFYTGRKPLLENVPTWRCSEPDSLKYVLDNLAELVVKEV
CCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
HGSGGYGMLVGPTASKKERALFAEKLKARPSNYIAQPTLSLSTVPIMVKNGIAPRHVDLR
CCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCEECCC
PYVLVSDKVKIIPGGLTRVALKQGSLVVNSSQGGGTKDTWVLED
CEEEECCCEEEECCCHHEEEEECCCEEEECCCCCCCCCCEEECC
>Mature Secondary Structure
MINADNAPRSPYENYNEWYSRQDRAHLIQKSKDAENIFRKTGITFAVYGHADSSEKLIPF
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEECCCCCCCCCCH
DIIPRIISGREWRKLAQGIEQRVLALNAFLDDIYHKQEIIRAGRIPREIIEKNVAFLPEM
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
IGFTPPGGVYTHIVGTDIVRTGEDQFYVLEDNARTPSGVSYMLENRETMMQMFPELFHEN
HCCCCCCCEEEEEECCHHEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
KVRRVEDYPYQLRQSLASLAPPGCTDKPRVAILTPGIYNSAYYEHSFLADMMGVELVEGS
CHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCEEECCC
DLRVMDGKVKMRTTRGYEAIDVLYRRVDDDFLDPLTFRSDSALGVPGIMDVYRAGNITIA
CEEEECCEEEEEECCCHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCHHHHHHHCCCEEEE
NAPGTGISDDKAIYSYMPEIVEFYTGRKPLLENVPTWRCSEPDSLKYVLDNLAELVVKEV
CCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
HGSGGYGMLVGPTASKKERALFAEKLKARPSNYIAQPTLSLSTVPIMVKNGIAPRHVDLR
CCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCEECCC
PYVLVSDKVKIIPGGLTRVALKQGSLVVNSSQGGGTKDTWVLED
CEEEECCCEEEECCCHHEEEEECCCEEEECCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1368738; 8590279; 8905231 [H]