Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889616
Identifier: 15889616
GI number: 15889616
Start: 2317366
End: 2318307
Strand: Direct
Name: 15889616
Synonym: Atu2339
Alternate gene names: NA
Gene position: 2317366-2318307 (Clockwise)
Preceding gene: 159185163
Following gene: 15889617
Centisome position: 81.55
GC content: 59.66
Gene sequence:
>942_bases ATGCTGGGCAGAACGGCAAACGGGCTCTACTGGATGTTCCGGTATATAGAGCGCGCTGAAAACATCGCCCGGCTGATCGA TGCAGGCCTGCGCGTTTCACTGACGCGCAGCGGCAGCGGCGATGAGGACTGGGACGGCGTATTGCAGAGCGCCGGCGTGC ACGAGGAGTTCCTCGAAACGCGCGAGAAGGTGACGGCGGCCAATGCGATAGATTATCTCCTGCGGGACAAGGCAAACCCT TCCAGCGTCATGTCCTGCATCGAGGCAGGCCGCAACAATGCCCGCATGGTGCGCACGGCGCTGACGCGCGAGACATGGGA AGCCACCAACGAATTCTGGATCGAGCTGAAGAACATCCTCGGCCGCAAGCTCAGCCACGCCGAGCTTCCGCAGACCATCG ATGTCATCAAACATCGCGCCGGTCTGGTGCGCGGCGCTTTCCACGGTTCGATGCTGCGCAACGATCTCTATAATTTCTCC CGCATCGGCACCTTCATCGAGCGGGCCGACAACACGGCCCGCATCCTCGACGTCAAATATTACGTGCTGCTGCCGGCCGT GGCGCATGTGGGCTCCTCGCTCGACAATGCGCAATGGGAATCCATCCTGCGCTCGGTCTCGGCGCACCGCTCCTATGGCT GGGTCTATGATGCGGAATACAAACCGGCCAACATTGCCGACTTCCTCATTCTCAACGGCCGCATGCCGCGCTCGCTTGCC TATTGTTACGAGAAGATCGCCAGCAACCTCAATTACATCGCCGAGGATTACGGCGAAAGGCACAAGGCGCATGAGACGGC GGAAAGCATCCGCGACAGCCTGCGCAAGACGACCATCGCCCGTGTCATGGATGAAGGTCTGCACGAGTTTCTGGAGAGAT TCGTCAACCGGAACGGCCAGCTGGGGCAGGAAATCATGGAAGGCTACCGCTTTTATCTATAA
Upstream 100 bases:
>100_bases CGGCGGCCTGACCCGCGTGGCCCTCAAGCAGGGTTCGCTGGTGGTCAATTCCAGCCAGGGCGGCGGCACCAAGGATACAT GGGTACTGGAGGATTAAGCC
Downstream 100 bases:
>100_bases GCGCGTGGACGGGGACAGCTTATGCGTCTGAAAATCACCCATACGACCGAATATGTCTATGACGAGCCGATGCCCTATGC GTTGCAACGGCTGCGCCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MLGRTANGLYWMFRYIERAENIARLIDAGLRVSLTRSGSGDEDWDGVLQSAGVHEEFLETREKVTAANAIDYLLRDKANP SSVMSCIEAGRNNARMVRTALTRETWEATNEFWIELKNILGRKLSHAELPQTIDVIKHRAGLVRGAFHGSMLRNDLYNFS RIGTFIERADNTARILDVKYYVLLPAVAHVGSSLDNAQWESILRSVSAHRSYGWVYDAEYKPANIADFLILNGRMPRSLA YCYEKIASNLNYIAEDYGERHKAHETAESIRDSLRKTTIARVMDEGLHEFLERFVNRNGQLGQEIMEGYRFYL
Sequences:
>Translated_313_residues MLGRTANGLYWMFRYIERAENIARLIDAGLRVSLTRSGSGDEDWDGVLQSAGVHEEFLETREKVTAANAIDYLLRDKANP SSVMSCIEAGRNNARMVRTALTRETWEATNEFWIELKNILGRKLSHAELPQTIDVIKHRAGLVRGAFHGSMLRNDLYNFS RIGTFIERADNTARILDVKYYVLLPAVAHVGSSLDNAQWESILRSVSAHRSYGWVYDAEYKPANIADFLILNGRMPRSLA YCYEKIASNLNYIAEDYGERHKAHETAESIRDSLRKTTIARVMDEGLHEFLERFVNRNGQLGQEIMEGYRFYL >Mature_313_residues MLGRTANGLYWMFRYIERAENIARLIDAGLRVSLTRSGSGDEDWDGVLQSAGVHEEFLETREKVTAANAIDYLLRDKANP SSVMSCIEAGRNNARMVRTALTRETWEATNEFWIELKNILGRKLSHAELPQTIDVIKHRAGLVRGAFHGSMLRNDLYNFS RIGTFIERADNTARILDVKYYVLLPAVAHVGSSLDNAQWESILRSVSAHRSYGWVYDAEYKPANIADFLILNGRMPRSLA YCYEKIASNLNYIAEDYGERHKAHETAESIRDSLRKTTIARVMDEGLHEFLERFVNRNGQLGQEIMEGYRFYL
Specific function: Unknown
COG id: COG2307
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35807; Mature: 35807
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGRTANGLYWMFRYIERAENIARLIDAGLRVSLTRSGSGDEDWDGVLQSAGVHEEFLET CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHCCCHHHHHHH REKVTAANAIDYLLRDKANPSSVMSCIEAGRNNARMVRTALTRETWEATNEFWIELKNIL HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GRKLSHAELPQTIDVIKHRAGLVRGAFHGSMLRNDLYNFSRIGTFIERADNTARILDVKY CCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH YVLLPAVAHVGSSLDNAQWESILRSVSAHRSYGWVYDAEYKPANIADFLILNGRMPRSLA HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHEECCCCCHHHH YCYEKIASNLNYIAEDYGERHKAHETAESIRDSLRKTTIARVMDEGLHEFLERFVNRNGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LGQEIMEGYRFYL HHHHHHHHHHHCC >Mature Secondary Structure MLGRTANGLYWMFRYIERAENIARLIDAGLRVSLTRSGSGDEDWDGVLQSAGVHEEFLET CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHCCCHHHHHHH REKVTAANAIDYLLRDKANPSSVMSCIEAGRNNARMVRTALTRETWEATNEFWIELKNIL HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GRKLSHAELPQTIDVIKHRAGLVRGAFHGSMLRNDLYNFSRIGTFIERADNTARILDVKY CCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH YVLLPAVAHVGSSLDNAQWESILRSVSAHRSYGWVYDAEYKPANIADFLILNGRMPRSLA HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHEECCCCCHHHH YCYEKIASNLNYIAEDYGERHKAHETAESIRDSLRKTTIARVMDEGLHEFLERFVNRNGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LGQEIMEGYRFYL HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA