Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 15889616

Identifier: 15889616

GI number: 15889616

Start: 2317366

End: 2318307

Strand: Direct

Name: 15889616

Synonym: Atu2339

Alternate gene names: NA

Gene position: 2317366-2318307 (Clockwise)

Preceding gene: 159185163

Following gene: 15889617

Centisome position: 81.55

GC content: 59.66

Gene sequence:

>942_bases
ATGCTGGGCAGAACGGCAAACGGGCTCTACTGGATGTTCCGGTATATAGAGCGCGCTGAAAACATCGCCCGGCTGATCGA
TGCAGGCCTGCGCGTTTCACTGACGCGCAGCGGCAGCGGCGATGAGGACTGGGACGGCGTATTGCAGAGCGCCGGCGTGC
ACGAGGAGTTCCTCGAAACGCGCGAGAAGGTGACGGCGGCCAATGCGATAGATTATCTCCTGCGGGACAAGGCAAACCCT
TCCAGCGTCATGTCCTGCATCGAGGCAGGCCGCAACAATGCCCGCATGGTGCGCACGGCGCTGACGCGCGAGACATGGGA
AGCCACCAACGAATTCTGGATCGAGCTGAAGAACATCCTCGGCCGCAAGCTCAGCCACGCCGAGCTTCCGCAGACCATCG
ATGTCATCAAACATCGCGCCGGTCTGGTGCGCGGCGCTTTCCACGGTTCGATGCTGCGCAACGATCTCTATAATTTCTCC
CGCATCGGCACCTTCATCGAGCGGGCCGACAACACGGCCCGCATCCTCGACGTCAAATATTACGTGCTGCTGCCGGCCGT
GGCGCATGTGGGCTCCTCGCTCGACAATGCGCAATGGGAATCCATCCTGCGCTCGGTCTCGGCGCACCGCTCCTATGGCT
GGGTCTATGATGCGGAATACAAACCGGCCAACATTGCCGACTTCCTCATTCTCAACGGCCGCATGCCGCGCTCGCTTGCC
TATTGTTACGAGAAGATCGCCAGCAACCTCAATTACATCGCCGAGGATTACGGCGAAAGGCACAAGGCGCATGAGACGGC
GGAAAGCATCCGCGACAGCCTGCGCAAGACGACCATCGCCCGTGTCATGGATGAAGGTCTGCACGAGTTTCTGGAGAGAT
TCGTCAACCGGAACGGCCAGCTGGGGCAGGAAATCATGGAAGGCTACCGCTTTTATCTATAA

Upstream 100 bases:

>100_bases
CGGCGGCCTGACCCGCGTGGCCCTCAAGCAGGGTTCGCTGGTGGTCAATTCCAGCCAGGGCGGCGGCACCAAGGATACAT
GGGTACTGGAGGATTAAGCC

Downstream 100 bases:

>100_bases
GCGCGTGGACGGGGACAGCTTATGCGTCTGAAAATCACCCATACGACCGAATATGTCTATGACGAGCCGATGCCCTATGC
GTTGCAACGGCTGCGCCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MLGRTANGLYWMFRYIERAENIARLIDAGLRVSLTRSGSGDEDWDGVLQSAGVHEEFLETREKVTAANAIDYLLRDKANP
SSVMSCIEAGRNNARMVRTALTRETWEATNEFWIELKNILGRKLSHAELPQTIDVIKHRAGLVRGAFHGSMLRNDLYNFS
RIGTFIERADNTARILDVKYYVLLPAVAHVGSSLDNAQWESILRSVSAHRSYGWVYDAEYKPANIADFLILNGRMPRSLA
YCYEKIASNLNYIAEDYGERHKAHETAESIRDSLRKTTIARVMDEGLHEFLERFVNRNGQLGQEIMEGYRFYL

Sequences:

>Translated_313_residues
MLGRTANGLYWMFRYIERAENIARLIDAGLRVSLTRSGSGDEDWDGVLQSAGVHEEFLETREKVTAANAIDYLLRDKANP
SSVMSCIEAGRNNARMVRTALTRETWEATNEFWIELKNILGRKLSHAELPQTIDVIKHRAGLVRGAFHGSMLRNDLYNFS
RIGTFIERADNTARILDVKYYVLLPAVAHVGSSLDNAQWESILRSVSAHRSYGWVYDAEYKPANIADFLILNGRMPRSLA
YCYEKIASNLNYIAEDYGERHKAHETAESIRDSLRKTTIARVMDEGLHEFLERFVNRNGQLGQEIMEGYRFYL
>Mature_313_residues
MLGRTANGLYWMFRYIERAENIARLIDAGLRVSLTRSGSGDEDWDGVLQSAGVHEEFLETREKVTAANAIDYLLRDKANP
SSVMSCIEAGRNNARMVRTALTRETWEATNEFWIELKNILGRKLSHAELPQTIDVIKHRAGLVRGAFHGSMLRNDLYNFS
RIGTFIERADNTARILDVKYYVLLPAVAHVGSSLDNAQWESILRSVSAHRSYGWVYDAEYKPANIADFLILNGRMPRSLA
YCYEKIASNLNYIAEDYGERHKAHETAESIRDSLRKTTIARVMDEGLHEFLERFVNRNGQLGQEIMEGYRFYL

Specific function: Unknown

COG id: COG2307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35807; Mature: 35807

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGRTANGLYWMFRYIERAENIARLIDAGLRVSLTRSGSGDEDWDGVLQSAGVHEEFLET
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHCCCHHHHHHH
REKVTAANAIDYLLRDKANPSSVMSCIEAGRNNARMVRTALTRETWEATNEFWIELKNIL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRKLSHAELPQTIDVIKHRAGLVRGAFHGSMLRNDLYNFSRIGTFIERADNTARILDVKY
CCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
YVLLPAVAHVGSSLDNAQWESILRSVSAHRSYGWVYDAEYKPANIADFLILNGRMPRSLA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHEECCCCCHHHH
YCYEKIASNLNYIAEDYGERHKAHETAESIRDSLRKTTIARVMDEGLHEFLERFVNRNGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LGQEIMEGYRFYL
HHHHHHHHHHHCC
>Mature Secondary Structure
MLGRTANGLYWMFRYIERAENIARLIDAGLRVSLTRSGSGDEDWDGVLQSAGVHEEFLET
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHCCCHHHHHHH
REKVTAANAIDYLLRDKANPSSVMSCIEAGRNNARMVRTALTRETWEATNEFWIELKNIL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRKLSHAELPQTIDVIKHRAGLVRGAFHGSMLRNDLYNFSRIGTFIERADNTARILDVKY
CCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
YVLLPAVAHVGSSLDNAQWESILRSVSAHRSYGWVYDAEYKPANIADFLILNGRMPRSLA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHEECCCCCHHHH
YCYEKIASNLNYIAEDYGERHKAHETAESIRDSLRKTTIARVMDEGLHEFLERFVNRNGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LGQEIMEGYRFYL
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA