Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 159185160

Identifier: 159185160

GI number: 159185160

Start: 2304492

End: 2305610

Strand: Reverse

Name: 159185160

Synonym: Atu2330

Alternate gene names: NA

Gene position: 2305610-2304492 (Counterclockwise)

Preceding gene: 159185161

Following gene: 15889606

Centisome position: 81.14

GC content: 63.99

Gene sequence:

>1119_bases
ATGGGTCTGTGGGCGGCGGTGAAGGCGGAACGGCTCGGCATCGGTACCCTCCTGGTAGAGGCGGGTCGTCTTGGTGGCGG
CGCGAGCGGCGGGCTTCTGGGCGCCTTGATGCCGCATATGCCGGACCGCTGGTCGGACAAGAAGCAGTTTCAGTTCGATG
CTCTTGTCGCGCTGGAAGCGGAGATCGCGGGCTTGGAGGCAGAGACCGGGCTTTCCGGCGGTTATCGCCGCTGCGGACGG
ATCATTCCACTGCCCAAGCCGCATCTGCGCGGCATCGCCGAGCGACACGAGCGGGATGCGGCGGAAAACTGGCGATCGGG
TGAACGCCGGTTCCAATGGCATGTGGGAGAGAGGCCATCGGTCGCGGGCTGGGTGGATGACGCAGCGGGCGAGGCCGGTT
TCGTCTTCGACACGTTGGCGGCAAGGGTCTCGCCGCGCGCCTTGATCGCGCTGCTCTCGGCTTTTCTCCGCAAGGCGCGG
CATGTGCAGGTGGCGGAAGGCTGCCGGGTTGTTTCCCTTGATGCGGATGCCGGGCGGGCGGCATTGTCTTCGGGAGAGGA
GATAAGCTTCGGCCATGTCGTGGTCGCCAATGGTCATGAGTCCTTTCCCCTGATCCGTGACGCTCTCGGGCTGGAAGCGG
GAGTTGCGCTGGGGCAGGCGGTAAAGGGGCAAGCGGCGCTTCTCGACGCTAGCGCTGATCCGGCCATGCCGGTCGTCTTC
CTCAACGGTCTTTATATCGTGCCGCATGAGGATGGCACCGTCGCGATCGGCAGTACCAGCGAAGATTGTTTTTCCGAGCC
CTTCAGTACCGACGAGAAGCTCGAAAAACTGCTTGTCGACGCCTGCACCGTTGTGCCTTCCCTTGCCGGCGCGCCGGTGC
TCGAACGCTGGGCCGGGCTGCGCCCGAAGGCGGTGGGGAGGGACCCGATGGTGGGGGCGATGGCCGGCACGGCGAAACTC
GTTGCGCTCTCCGGTGGTTTCAAAGTGAGCTTCGGGCTCGCGCATTTTCTTGCCGATGCGGCATTAGAAACTGTTTGCGG
TCACACGCCTGTCATCCCCTCGGGCTTTCGCCTTCAAGAACACGTGAGTATTGCCGTCCCGGACTTTAGAAAGTTCTGA

Upstream 100 bases:

>100_bases
TTTCATGGCTAAAGCCGATAATCCCGCTTTCGAACAGGGTCAATCACCAAGAATGCGTTTGCCGGATTCCGTGCCGCTCC
TCATCGTCGGCGGCGGCATC

Downstream 100 bases:

>100_bases
TTGGACCACTTACGTCGTTAATCTGTCACGCAAATCACTTATCTGCTGGCCTGCAAAGAGGCCGGTTTGTCCGCATTTGC
GGCGAGGTGACAGCGCATGC

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 371

Protein sequence:

>372_residues
MGLWAAVKAERLGIGTLLVEAGRLGGGASGGLLGALMPHMPDRWSDKKQFQFDALVALEAEIAGLEAETGLSGGYRRCGR
IIPLPKPHLRGIAERHERDAAENWRSGERRFQWHVGERPSVAGWVDDAAGEAGFVFDTLAARVSPRALIALLSAFLRKAR
HVQVAEGCRVVSLDADAGRAALSSGEEISFGHVVVANGHESFPLIRDALGLEAGVALGQAVKGQAALLDASADPAMPVVF
LNGLYIVPHEDGTVAIGSTSEDCFSEPFSTDEKLEKLLVDACTVVPSLAGAPVLERWAGLRPKAVGRDPMVGAMAGTAKL
VALSGGFKVSFGLAHFLADAALETVCGHTPVIPSGFRLQEHVSIAVPDFRKF

Sequences:

>Translated_372_residues
MGLWAAVKAERLGIGTLLVEAGRLGGGASGGLLGALMPHMPDRWSDKKQFQFDALVALEAEIAGLEAETGLSGGYRRCGR
IIPLPKPHLRGIAERHERDAAENWRSGERRFQWHVGERPSVAGWVDDAAGEAGFVFDTLAARVSPRALIALLSAFLRKAR
HVQVAEGCRVVSLDADAGRAALSSGEEISFGHVVVANGHESFPLIRDALGLEAGVALGQAVKGQAALLDASADPAMPVVF
LNGLYIVPHEDGTVAIGSTSEDCFSEPFSTDEKLEKLLVDACTVVPSLAGAPVLERWAGLRPKAVGRDPMVGAMAGTAKL
VALSGGFKVSFGLAHFLADAALETVCGHTPVIPSGFRLQEHVSIAVPDFRKF
>Mature_371_residues
GLWAAVKAERLGIGTLLVEAGRLGGGASGGLLGALMPHMPDRWSDKKQFQFDALVALEAEIAGLEAETGLSGGYRRCGRI
IPLPKPHLRGIAERHERDAAENWRSGERRFQWHVGERPSVAGWVDDAAGEAGFVFDTLAARVSPRALIALLSAFLRKARH
VQVAEGCRVVSLDADAGRAALSSGEEISFGHVVVANGHESFPLIRDALGLEAGVALGQAVKGQAALLDASADPAMPVVFL
NGLYIVPHEDGTVAIGSTSEDCFSEPFSTDEKLEKLLVDACTVVPSLAGAPVLERWAGLRPKAVGRDPMVGAMAGTAKLV
ALSGGFKVSFGLAHFLADAALETVCGHTPVIPSGFRLQEHVSIAVPDFRKF

Specific function: Unknown

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR012727 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: NA

Molecular weight: Translated: 39204; Mature: 39073

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLWAAVKAERLGIGTLLVEAGRLGGGASGGLLGALMPHMPDRWSDKKQFQFDALVALEA
CCCCHHHHHHHCCHHHHEEECCCCCCCCCCCHHHHHHCCCCCCCCCCHHEEHHHHEEEHH
EIAGLEAETGLSGGYRRCGRIIPLPKPHLRGIAERHERDAAENWRSGERRFQWHVGERPS
HHHCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
VAGWVDDAAGEAGFVFDTLAARVSPRALIALLSAFLRKARHVQVAEGCRVVSLDADAGRA
CCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEHHCCCEEEEECCCCCHH
ALSSGEEISFGHVVVANGHESFPLIRDALGLEAGVALGQAVKGQAALLDASADPAMPVVF
HHCCCCCEEECEEEEECCCCCCHHHHHHHCHHHHHHHHHHHCCCEEEEECCCCCCCCEEE
LNGLYIVPHEDGTVAIGSTSEDCFSEPFSTDEKLEKLLVDACTVVPSLAGAPVLERWAGL
ECCEEEEECCCCCEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC
RPKAVGRDPMVGAMAGTAKLVALSGGFKVSFGLAHFLADAALETVCGHTPVIPSGFRLQE
CCCCCCCCCCCCHHCCCEEEEEECCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCEECC
HVSIAVPDFRKF
CEEEECCHHHCC
>Mature Secondary Structure 
GLWAAVKAERLGIGTLLVEAGRLGGGASGGLLGALMPHMPDRWSDKKQFQFDALVALEA
CCCHHHHHHHCCHHHHEEECCCCCCCCCCCHHHHHHCCCCCCCCCCHHEEHHHHEEEHH
EIAGLEAETGLSGGYRRCGRIIPLPKPHLRGIAERHERDAAENWRSGERRFQWHVGERPS
HHHCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
VAGWVDDAAGEAGFVFDTLAARVSPRALIALLSAFLRKARHVQVAEGCRVVSLDADAGRA
CCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEHHCCCEEEEECCCCCHH
ALSSGEEISFGHVVVANGHESFPLIRDALGLEAGVALGQAVKGQAALLDASADPAMPVVF
HHCCCCCEEECEEEEECCCCCCHHHHHHHCHHHHHHHHHHHCCCEEEEECCCCCCCCEEE
LNGLYIVPHEDGTVAIGSTSEDCFSEPFSTDEKLEKLLVDACTVVPSLAGAPVLERWAGL
ECCEEEEECCCCCEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC
RPKAVGRDPMVGAMAGTAKLVALSGGFKVSFGLAHFLADAALETVCGHTPVIPSGFRLQE
CCCCCCCCCCCCHHCCCEEEEEECCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCEECC
HVSIAVPDFRKF
CEEEECCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8682785; 10984043; 8097014 [H]