Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185128
Identifier: 159185128
GI number: 159185128
Start: 2234941
End: 2235432
Strand: Reverse
Name: 159185128
Synonym: Atu2262
Alternate gene names: NA
Gene position: 2235432-2234941 (Counterclockwise)
Preceding gene: 159185129
Following gene: 159185126
Centisome position: 78.67
GC content: 59.96
Gene sequence:
>492_bases GTGAATGACGAGACAACAGGGCAGAAGGCCCGTCCGTTCCACAGGCGTGTCTTCATCCGCTTTATGCATTTCGTTTTCCT GCTCACGCGCGGGGCCACGCTTGGCGTGCGTGCGGCCTGTTTCGATGAAAAGGGCAGGATCTTTCTGGTGCGGCATACCT ATCTGCCCGGCTGGTATCTTCCGGGTGGCGGGGTGGAGCGGGGCGAGACCCTGCTGATGGCACTGCACAAGGAGATCCGT GAGGAAGGCAATCTCGATGCTGCCTCGATCCCTGAGCTTGTCCATGTCTACCTCAATCTGGAAGGTAGCAACCGCGATCA TGTGGCGCTCTATCGGCTTCAGGTCACCCAGACGACGCCGAAAAAACCGGATCATGAGATCACCGAAAGCGGCTTTTTCG AACTCTCAGCCCTGCCCGAGGGATTGACGCCAGCGACCCGCCGCCGCCTTGCCGAGCTTGCCGGCGAAGCGGCGATTGCC GACTATTGGTAG
Upstream 100 bases:
>100_bases AATGGACGTCTGAAATATGCGCAAGTTTAAACATGGCGGCAGAGATAACCTATGATATGTGGCACGTCCAATAAAAGCCT GCCAGCGCGGAGAAACCAGG
Downstream 100 bases:
>100_bases CGGCGGGCGGCTTTCCGTCAGGAGAGCGCCTCGCGGCCATGGGCCATGGTCAGGTCCAGTTCCGGGCCGATGGGCACGAT GCCGGTCGGATTGATGGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Nudix Hydrolase; MutT/Nudix Family Protein; Hydrolase Protein; Hydrolase Protein MutT/Nudix Family; MutT/NUDIX Family Protein; NUDIX Family Hydrolase; MutT/NUDIX Family Hydrolase; Hydrolase NUDIX Family
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MNDETTGQKARPFHRRVFIRFMHFVFLLTRGATLGVRAACFDEKGRIFLVRHTYLPGWYLPGGGVERGETLLMALHKEIR EEGNLDAASIPELVHVYLNLEGSNRDHVALYRLQVTQTTPKKPDHEITESGFFELSALPEGLTPATRRRLAELAGEAAIA DYW
Sequences:
>Translated_163_residues MNDETTGQKARPFHRRVFIRFMHFVFLLTRGATLGVRAACFDEKGRIFLVRHTYLPGWYLPGGGVERGETLLMALHKEIR EEGNLDAASIPELVHVYLNLEGSNRDHVALYRLQVTQTTPKKPDHEITESGFFELSALPEGLTPATRRRLAELAGEAAIA DYW >Mature_163_residues MNDETTGQKARPFHRRVFIRFMHFVFLLTRGATLGVRAACFDEKGRIFLVRHTYLPGWYLPGGGVERGETLLMALHKEIR EEGNLDAASIPELVHVYLNLEGSNRDHVALYRLQVTQTTPKKPDHEITESGFFELSALPEGLTPATRRRLAELAGEAAIA DYW
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18477; Mature: 18477
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDETTGQKARPFHRRVFIRFMHFVFLLTRGATLGVRAACFDEKGRIFLVRHTYLPGWYL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCCCEEC PGGGVERGETLLMALHKEIREEGNLDAASIPELVHVYLNLEGSNRDHVALYRLQVTQTTP CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCCCEEEEEEEEEECCCC KKPDHEITESGFFELSALPEGLTPATRRRLAELAGEAAIADYW CCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCHHCCCC >Mature Secondary Structure MNDETTGQKARPFHRRVFIRFMHFVFLLTRGATLGVRAACFDEKGRIFLVRHTYLPGWYL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCCCEEC PGGGVERGETLLMALHKEIREEGNLDAASIPELVHVYLNLEGSNRDHVALYRLQVTQTTP CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCCCEEEEEEEEEECCCC KKPDHEITESGFFELSALPEGLTPATRRRLAELAGEAAIADYW CCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA