Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185094
Identifier: 159185094
GI number: 159185094
Start: 2165229
End: 2165618
Strand: Reverse
Name: 159185094
Synonym: Atu2189
Alternate gene names: NA
Gene position: 2165618-2165229 (Counterclockwise)
Preceding gene: 159185095
Following gene: 15889464
Centisome position: 76.21
GC content: 61.03
Gene sequence:
>390_bases ATGGCCACGGCAACGGGTGGATCATCTCGCCAGCGCGGTATCTTTGCCGTGGTATCGGCTGTGGTGCCGGTGCTGATTTT CGCGCAGGTGCTGCTGGCCGGGCTGTCGATCTACTATGACGGGTCGCTGCTTTCGCTGCACAAAGGGCTTGGCATCTTCA TCGCCGTTCCCATCATCTCACTGGTGGTCCTGGCGCTGCGTGATGATGATCTGCGGCCGAATCTTGCCCGTTCTCTAGTG CTGCTCGCCCTCTATTGCCTGCAGGTGGCGTTGATGAGCATCGGCCGGGAAACGGGCAATGGTTTCCTGCAGGCGCTGCA TGTGCCCAACGCCTTCATCATGGGTGCGTTTTCAGATTTTGCCGCGCGGCAGGCGAGAGGCCCGCGCTGA
Upstream 100 bases:
>100_bases ATATTGCGGTATCGGCGACATTGACAAGCCTTGGCTGCATCGAACAGCCGCGGGTGCCGGCCAGCCTTCATCGCCCGGTC GATGCCGGGGGGAGGGTGTG
Downstream 100 bases:
>100_bases AAGAAAAATGCCGCACAGCCAAAGGGCGGTGCGGCGTTTCAGTTTATCAGCCGAGTGCCGGATAGTCGGTATAACCTTCG GCTCCGCCGCCATAGAAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MATATGGSSRQRGIFAVVSAVVPVLIFAQVLLAGLSIYYDGSLLSLHKGLGIFIAVPIISLVVLALRDDDLRPNLARSLV LLALYCLQVALMSIGRETGNGFLQALHVPNAFIMGAFSDFAARQARGPR
Sequences:
>Translated_129_residues MATATGGSSRQRGIFAVVSAVVPVLIFAQVLLAGLSIYYDGSLLSLHKGLGIFIAVPIISLVVLALRDDDLRPNLARSLV LLALYCLQVALMSIGRETGNGFLQALHVPNAFIMGAFSDFAARQARGPR >Mature_128_residues ATATGGSSRQRGIFAVVSAVVPVLIFAQVLLAGLSIYYDGSLLSLHKGLGIFIAVPIISLVVLALRDDDLRPNLARSLVL LALYCLQVALMSIGRETGNGFLQALHVPNAFIMGAFSDFAARQARGPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13667; Mature: 13536
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATATGGSSRQRGIFAVVSAVVPVLIFAQVLLAGLSIYYDGSLLSLHKGLGIFIAVPIIS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHH LVVLALRDDDLRPNLARSLVLLALYCLQVALMSIGRETGNGFLQALHVPNAFIMGAFSDF HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHH AARQARGPR HHHHCCCCC >Mature Secondary Structure ATATGGSSRQRGIFAVVSAVVPVLIFAQVLLAGLSIYYDGSLLSLHKGLGIFIAVPIIS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHH LVVLALRDDDLRPNLARSLVLLALYCLQVALMSIGRETGNGFLQALHVPNAFIMGAFSDF HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHH AARQARGPR HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA