Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is hflK [H]
Identifier: 159185025
GI number: 159185025
Start: 2004069
End: 2005187
Strand: Reverse
Name: hflK [H]
Synonym: Atu2045
Alternate gene names: 159185025
Gene position: 2005187-2004069 (Counterclockwise)
Preceding gene: 15889333
Following gene: 15889331
Centisome position: 70.57
GC content: 61.93
Gene sequence:
>1119_bases ATGCCCTGGAGCAATCAGAATGGCGGCGGCGGCCCATGGGGCGGCGGCGGTGGAGGAAACAACCAGGGCGGCGGTGGCGG CCCATGGGGGCAGGGGCCTAACCGGCCTCGCGGCGGTGGCGGCGGCAATGGCGGCCCACCCGATCTGGAAGAGATCATCC GGCGCAGCCAGGACCGTTTCAAGAATGTGCTGCCCGGCGGCTTCAATGGCGGCGTGGTCGCCATCGTGGTTCTCGTCGTT CTGGTTTTCCTCGGCATCCAGTCCATCTACACCGTCCAGCCGGATGAGCGCGGCGTCGAGCTGCGTTTCGGCCGTCCGAA GGACGAAATCTCGATGCCTGGCCTGCATTTCCATCTGTGGCCGATCGAGACGGTGGAAATCGTCAAGGTGACCGAGCAGC AGCAGAATATCGGCTCGCGCGCCTCGTCGTCTTCGTCGAGCGGCGTGATGCTGACCGGCGACCAGAACATCGTCAACGTT CAGTTCTCGGTGCTTTATACGGTCTCCGATCCGAAATCCTATCTCTTCAACGTCGACGCCCCGGCGGAAACGCTGCAGCA GGTTTCCGAAAGCGCCATGCGCGAAGTCGTTGGCCGTCGTCCGGCGCAGGATATCTTCCGCGATAACCGACAGGCGATTG CGGCGGATGTGCGCAGCATCATCCAGTCCACCATGGACGGTTATGGCGCGGGCATCTCCATCAATGCAGTGGCCATCGAA GATGCGGCTCCGCCGCGCGAAGTGGCCGATGCCTTCGACGAAGTGCAGCGTGCCGAACAGGATGAAGACCGCTTCGTTCA GGAAGCCAATCAATACGCCAACCAGAAGCTCGGTGCCGCACGCGGTCAGGCCGCGCAGATCGTCGAAGAGGCGAACGCCT ACAAGTCGCGTGTCGTCAACGAGGCGGAAGGTGAGGCGCAGCGCTTCATTTCCATCTATGACCAGTATCGCACGGCGCCT GAGGTAACCCGTCAGCGCATGTTCCTGGAAACGATGGAGCAGGTCCTGAAGGGTTCCAACAAGATCATCATCGACGAGAA ACAGGGCGTGGTGCCTTATCTGCCTCTGAACGAGATCATGCGCAACAATCCGGGCGCAGCACAGCAGGGAGGCAACTGA
Upstream 100 bases:
>100_bases AAACAGGCGCTTCTCCTTCCTATAACGGGTCGATATTCCCGCCGCACGCGAGCAATCGCTTACGAACGGAACCGGGAGAG GCTTTTATAAAGAGGTATTG
Downstream 100 bases:
>100_bases TATGGGTAACCGTCTTACGGCCGTTCTTGTCGGTCTCGCCGTCCTGCTTTTCCTCGGTTATTCGTCGATCTTCGTCGTCA ACGAGCGCCAGCAGGCCATC
Product: HFLK protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MPWSNQNGGGGPWGGGGGGNNQGGGGGPWGQGPNRPRGGGGGNGGPPDLEEIIRRSQDRFKNVLPGGFNGGVVAIVVLVV LVFLGIQSIYTVQPDERGVELRFGRPKDEISMPGLHFHLWPIETVEIVKVTEQQQNIGSRASSSSSSGVMLTGDQNIVNV QFSVLYTVSDPKSYLFNVDAPAETLQQVSESAMREVVGRRPAQDIFRDNRQAIAADVRSIIQSTMDGYGAGISINAVAIE DAAPPREVADAFDEVQRAEQDEDRFVQEANQYANQKLGAARGQAAQIVEEANAYKSRVVNEAEGEAQRFISIYDQYRTAP EVTRQRMFLETMEQVLKGSNKIIIDEKQGVVPYLPLNEIMRNNPGAAQQGGN
Sequences:
>Translated_372_residues MPWSNQNGGGGPWGGGGGGNNQGGGGGPWGQGPNRPRGGGGGNGGPPDLEEIIRRSQDRFKNVLPGGFNGGVVAIVVLVV LVFLGIQSIYTVQPDERGVELRFGRPKDEISMPGLHFHLWPIETVEIVKVTEQQQNIGSRASSSSSSGVMLTGDQNIVNV QFSVLYTVSDPKSYLFNVDAPAETLQQVSESAMREVVGRRPAQDIFRDNRQAIAADVRSIIQSTMDGYGAGISINAVAIE DAAPPREVADAFDEVQRAEQDEDRFVQEANQYANQKLGAARGQAAQIVEEANAYKSRVVNEAEGEAQRFISIYDQYRTAP EVTRQRMFLETMEQVLKGSNKIIIDEKQGVVPYLPLNEIMRNNPGAAQQGGN >Mature_371_residues PWSNQNGGGGPWGGGGGGNNQGGGGGPWGQGPNRPRGGGGGNGGPPDLEEIIRRSQDRFKNVLPGGFNGGVVAIVVLVVL VFLGIQSIYTVQPDERGVELRFGRPKDEISMPGLHFHLWPIETVEIVKVTEQQQNIGSRASSSSSSGVMLTGDQNIVNVQ FSVLYTVSDPKSYLFNVDAPAETLQQVSESAMREVVGRRPAQDIFRDNRQAIAADVRSIIQSTMDGYGAGISINAVAIED AAPPREVADAFDEVQRAEQDEDRFVQEANQYANQKLGAARGQAAQIVEEANAYKSRVVNEAEGEAQRFISIYDQYRTAPE VTRQRMFLETMEQVLKGSNKIIIDEKQGVVPYLPLNEIMRNNPGAAQQGGN
Specific function: HflC and HflK govern the stability of phage lambda cII protein and have been proposed to encode or regulate a cII- specific protease [H]
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the band 7/mec-2 family. HflK subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790616, Length=394, Percent_Identity=33.756345177665, Blast_Score=202, Evalue=3e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 - InterPro: IPR010201 - InterPro: IPR020980 - InterPro: IPR001972 [H]
Pfam domain/function: PF01145 Band_7; PF12221 HflK_N [H]
EC number: NA
Molecular weight: Translated: 40196; Mature: 40065
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPWSNQNGGGGPWGGGGGGNNQGGGGGPWGQGPNRPRGGGGGNGGPPDLEEIIRRSQDRF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH KNVLPGGFNGGVVAIVVLVVLVFLGIQSIYTVQPDERGVELRFGRPKDEISMPGLHFHLW HHCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCHHHCCCCCCEEEEC PIETVEIVKVTEQQQNIGSRASSSSSSGVMLTGDQNIVNVQFSVLYTVSDPKSYLFNVDA CCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEEEEEEEEEECCCHHHEEECCC PAETLQQVSESAMREVVGRRPAQDIFRDNRQAIAADVRSIIQSTMDGYGAGISINAVAIE HHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEC DAAPPREVADAFDEVQRAEQDEDRFVQEANQYANQKLGAARGQAAQIVEEANAYKSRVVN CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH EAEGEAQRFISIYDQYRTAPEVTRQRMFLETMEQVLKGSNKIIIDEKQGVVPYLPLNEIM HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHH RNNPGAAQQGGN CCCCCCCCCCCC >Mature Secondary Structure PWSNQNGGGGPWGGGGGGNNQGGGGGPWGQGPNRPRGGGGGNGGPPDLEEIIRRSQDRF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH KNVLPGGFNGGVVAIVVLVVLVFLGIQSIYTVQPDERGVELRFGRPKDEISMPGLHFHLW HHCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCHHHCCCCCCEEEEC PIETVEIVKVTEQQQNIGSRASSSSSSGVMLTGDQNIVNVQFSVLYTVSDPKSYLFNVDA CCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEEEEEEEEEECCCHHHEEECCC PAETLQQVSESAMREVVGRRPAQDIFRDNRQAIAADVRSIIQSTMDGYGAGISINAVAIE HHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEC DAAPPREVADAFDEVQRAEQDEDRFVQEANQYANQKLGAARGQAAQIVEEANAYKSRVVN CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH EAEGEAQRFISIYDQYRTAPEVTRQRMFLETMEQVLKGSNKIIIDEKQGVVPYLPLNEIM HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHH RNNPGAAQQGGN CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]