Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

Click here to switch to the map view.

The map label for this gene is 159185008

Identifier: 159185008

GI number: 159185008

Start: 1961076

End: 1961552

Strand: Reverse

Name: 159185008

Synonym: Atu1998

Alternate gene names: NA

Gene position: 1961552-1961076 (Counterclockwise)

Preceding gene: 15889289

Following gene: 17935883

Centisome position: 69.03

GC content: 57.23

Gene sequence:

>477_bases
ATGAATTTCGTGACACGCCGTCTCGCCATTGCTGCTCTTGCCCTCGCGCCCGCGCTGTTGGCCGCCCCCGTTCTGGCGGA
AACCGCCAAGCGCGATCTGGCCCAGGAAGAAACCAACCGCAAGCTGGTGATCGATTTTTACGACACCGTCTTCAACAAGC
ACGAGGTGGCGAAGGGCGCAGCCGTCATCGTCGACAGCTACAAGCAGCACAATCCGATGGTGCCTGACGGCAAGAAGCCG
TTCGTCGATTATTTCACCGGCTTCTTCAAGGAAAACCCGCAGGCAAAATCCCGGATCGTGCGCAGCGCTACGGATGGCGA
TCTGGTTTACCTGCATATCCATTCCACGGATAAAGAGGGTGCTCGCGGAGCCGCCATCGTCGATATCTTCAGGGTGACCG
ACGGCAAGATCACCGAACATTGGGACGTCATCCAGCCGGTGCCGGAAAAGGCTGCAAACAACAATACGATGTTCTAA

Upstream 100 bases:

>100_bases
GTATTTCTTTCGAGGATTACGCCATCGCGCTTGCCGATGAAATCGAGAAGCCGCAACATTCCCGCCAGCGTTTCACCGTC
GGTTATTGAGAGGTATCCCC

Downstream 100 bases:

>100_bases
GGCAGGCTTCTGCTAAAATGTCAGGAATTCAGAAGCACACGGCCGGGATATACTCTCCCGGCCGTATTTTTTCAGGCTGC
GCGTTGCTTCTGGCGGGACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MNFVTRRLAIAALALAPALLAAPVLAETAKRDLAQEETNRKLVIDFYDTVFNKHEVAKGAAVIVDSYKQHNPMVPDGKKP
FVDYFTGFFKENPQAKSRIVRSATDGDLVYLHIHSTDKEGARGAAIVDIFRVTDGKITEHWDVIQPVPEKAANNNTMF

Sequences:

>Translated_158_residues
MNFVTRRLAIAALALAPALLAAPVLAETAKRDLAQEETNRKLVIDFYDTVFNKHEVAKGAAVIVDSYKQHNPMVPDGKKP
FVDYFTGFFKENPQAKSRIVRSATDGDLVYLHIHSTDKEGARGAAIVDIFRVTDGKITEHWDVIQPVPEKAANNNTMF
>Mature_158_residues
MNFVTRRLAIAALALAPALLAAPVLAETAKRDLAQEETNRKLVIDFYDTVFNKHEVAKGAAVIVDSYKQHNPMVPDGKKP
FVDYFTGFFKENPQAKSRIVRSATDGDLVYLHIHSTDKEGARGAAIVDIFRVTDGKITEHWDVIQPVPEKAANNNTMF

Specific function: Unknown

COG id: COG4922

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17553; Mature: 17553

Theoretical pI: Translated: 7.88; Mature: 7.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFVTRRLAIAALALAPALLAAPVLAETAKRDLAQEETNRKLVIDFYDTVFNKHEVAKGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHCHHHHHCCH
AVIVDSYKQHNPMVPDGKKPFVDYFTGFFKENPQAKSRIVRSATDGDLVYLHIHSTDKEG
HEEEECHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEEECCCCCC
ARGAAIVDIFRVTDGKITEHWDVIQPVPEKAANNNTMF
CCCCEEEEEEECCCCCCCCCCHHHCCCCHHCCCCCCCC
>Mature Secondary Structure
MNFVTRRLAIAALALAPALLAAPVLAETAKRDLAQEETNRKLVIDFYDTVFNKHEVAKGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHCHHHHHCCH
AVIVDSYKQHNPMVPDGKKPFVDYFTGFFKENPQAKSRIVRSATDGDLVYLHIHSTDKEG
HEEEECHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEEECCCCCC
ARGAAIVDIFRVTDGKITEHWDVIQPVPEKAANNNTMF
CCCCEEEEEEECCCCCCCCCCHHHCCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA