Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184988
Identifier: 159184988
GI number: 159184988
Start: 1920852
End: 1921145
Strand: Direct
Name: 159184988
Synonym: Atu1952
Alternate gene names: NA
Gene position: 1920852-1921145 (Clockwise)
Preceding gene: 159184980
Following gene: 15889247
Centisome position: 67.6
GC content: 61.56
Gene sequence:
>294_bases ATGAGCACCCTCCCCGACAACGATAATGGACGCGACGAGCCGATGGTCTTCATCGTCATCGGCAAGGCTTACGAGACCGA CAATTCCGAGGGCATCGACATCCACGTCATCCTGCGGGCGCCGGATGACGATACCGCCGTGCGCGAGACGCTGAACGCGC TTTCCGAGGAAGGCTTCATCGAAGCCGATCTCGACCAGATCGGCATGCTGACCGAGATTCCGGACGAAGAACCGCACGCG TCCGCCTATCAGGGCGCGCTCGAAGGCGAAGTCGCCATCATCCGCTTCGCCTGA
Upstream 100 bases:
>100_bases GTCTATTGATTCCCTCAGGGCGGGCCGGATCGGTTTCGCCGCCCGCGGGACCGATTCCATCGGCCCGCAAGACAGCAACA AAAGATCAAGGAACCGCGCC
Downstream 100 bases:
>100_bases GGTACAGCCCCATGGCGGTCAGACGTGTCGTCGCCAATATCGCAACGCCCGAGCCCGCGCGGGCGCAGGCCTTCTACGGC GATATTCTCGGCATGCCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 97; Mature: 96
Protein sequence:
>97_residues MSTLPDNDNGRDEPMVFIVIGKAYETDNSEGIDIHVILRAPDDDTAVRETLNALSEEGFIEADLDQIGMLTEIPDEEPHA SAYQGALEGEVAIIRFA
Sequences:
>Translated_97_residues MSTLPDNDNGRDEPMVFIVIGKAYETDNSEGIDIHVILRAPDDDTAVRETLNALSEEGFIEADLDQIGMLTEIPDEEPHA SAYQGALEGEVAIIRFA >Mature_96_residues STLPDNDNGRDEPMVFIVIGKAYETDNSEGIDIHVILRAPDDDTAVRETLNALSEEGFIEADLDQIGMLTEIPDEEPHAS AYQGALEGEVAIIRFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10604; Mature: 10473
Theoretical pI: Translated: 3.68; Mature: 3.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLPDNDNGRDEPMVFIVIGKAYETDNSEGIDIHVILRAPDDDTAVRETLNALSEEGFI CCCCCCCCCCCCCCEEEEEECCEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCE EADLDQIGMLTEIPDEEPHASAYQGALEGEVAIIRFA EECHHHCCCCCCCCCCCCCCCHHCCCCCCCEEEEEEC >Mature Secondary Structure STLPDNDNGRDEPMVFIVIGKAYETDNSEGIDIHVILRAPDDDTAVRETLNALSEEGFI CCCCCCCCCCCCCEEEEEECCEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCE EADLDQIGMLTEIPDEEPHASAYQGALEGEVAIIRFA EECHHHCCCCCCCCCCCCCCCHHCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA