Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is yoaT [H]
Identifier: 159184980
GI number: 159184980
Start: 1899652
End: 1900524
Strand: Direct
Name: yoaT [H]
Synonym: Atu1921
Alternate gene names: 159184980
Gene position: 1899652-1900524 (Clockwise)
Preceding gene: 15889214
Following gene: 159184988
Centisome position: 66.85
GC content: 56.24
Gene sequence:
>873_bases ATGAGCACAGCAACAGGTCCAGCCGCAACCCGCCTCTCGGTTTTGGACAATCTTCTGTGCGATACCTATCCCTGGGGCGA ACTCAAGGGCATCAGGCGCTTCATCGTCGAATTTCTCTATTTCGGCATCAAGGAAGCCCGTGCCTGCCTGTTTGCGGGAT TGTTCTTCATTTCCATCTTCGTGGTGCCGCATGGTGGGCTATTTGGCATTCCGCGGTATGACGTGCTGCTGATCATCGCG CTCGGCATCCAGTTCTTCATGATCTGGAGCAGGCTGGAAACGCTTGACGAGGCCAAGGCCATCCTGCTGTTCCATATCGT CGGTTTCGCGCTTGAGGTGTTCAAGACGTCAAGCGCCATCCAGTCCTGGTCCTACCCCGATTTTGCCTATAGCAAGGTCC TCGGCGTGCCGCTCTTTTCCGGTTTCATGTACGCCGCCGTCGGCAGCTACATCATCCAGGCGTGGCGCCTGCTGGATGTG CGCATTCGCCATTATCCCACCTATTGGATGGCAACGCTGATCGGCATCGCCATCTACGCCAACTTCTTCACCCACCACTT CATCGGTGACTACCGCTGGTACATCGCCGCCTGCGCCATCGGCCTCTATTCCCGCGCAACGGTGGTCTATCGCCCCTATG ACCGCGACCGAAAGATGCCGCTGCTTCTCTCATTCGTCCTGATAGGGTTTTTCGTCTGGCTGGCAGAAAACATCTCGACA TTCTTCGGTATCTGGAAATATCCCGATCAGATCGGCGCCTGGTCCGTGGTGCATATCGGCAAGTGGAGTTCCTGGTCGCT GCTGGTCATCATGACGTTTACGATCGTCGCGCAGCTTAAGCACATCAAGGCCCGTATTCACGTTCCGGAGTGA
Upstream 100 bases:
>100_bases GGATGCGGGCAAAATAAGGCGGGGAAAGGCGTGACGGACCCATGCGAGTTCCTTCCGGTTTTCGTATGAAAATTTAATGG ATGTAAATCGAGGCGCGAAC
Downstream 100 bases:
>100_bases GAGAAGTAGAACTTCAGCCGAGCGTCTGGCAGGCACGCCAAAGGATTTGCAGAGGTAGCACCTCGCCTGCTCAATTTCCC AATACCCAAACGCAAAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MSTATGPAATRLSVLDNLLCDTYPWGELKGIRRFIVEFLYFGIKEARACLFAGLFFISIFVVPHGGLFGIPRYDVLLIIA LGIQFFMIWSRLETLDEAKAILLFHIVGFALEVFKTSSAIQSWSYPDFAYSKVLGVPLFSGFMYAAVGSYIIQAWRLLDV RIRHYPTYWMATLIGIAIYANFFTHHFIGDYRWYIAACAIGLYSRATVVYRPYDRDRKMPLLLSFVLIGFFVWLAENIST FFGIWKYPDQIGAWSVVHIGKWSSWSLLVIMTFTIVAQLKHIKARIHVPE
Sequences:
>Translated_290_residues MSTATGPAATRLSVLDNLLCDTYPWGELKGIRRFIVEFLYFGIKEARACLFAGLFFISIFVVPHGGLFGIPRYDVLLIIA LGIQFFMIWSRLETLDEAKAILLFHIVGFALEVFKTSSAIQSWSYPDFAYSKVLGVPLFSGFMYAAVGSYIIQAWRLLDV RIRHYPTYWMATLIGIAIYANFFTHHFIGDYRWYIAACAIGLYSRATVVYRPYDRDRKMPLLLSFVLIGFFVWLAENIST FFGIWKYPDQIGAWSVVHIGKWSSWSLLVIMTFTIVAQLKHIKARIHVPE >Mature_289_residues STATGPAATRLSVLDNLLCDTYPWGELKGIRRFIVEFLYFGIKEARACLFAGLFFISIFVVPHGGLFGIPRYDVLLIIAL GIQFFMIWSRLETLDEAKAILLFHIVGFALEVFKTSSAIQSWSYPDFAYSKVLGVPLFSGFMYAAVGSYIIQAWRLLDVR IRHYPTYWMATLIGIAIYANFFTHHFIGDYRWYIAACAIGLYSRATVVYRPYDRDRKMPLLLSFVLIGFFVWLAENISTF FGIWKYPDQIGAWSVVHIGKWSSWSLLVIMTFTIVAQLKHIKARIHVPE
Specific function: Unknown
COG id: COG3739
COG function: function code S; Uncharacterized integral membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008535 [H]
Pfam domain/function: PF05675 DUF817 [H]
EC number: NA
Molecular weight: Translated: 33280; Mature: 33148
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTATGPAATRLSVLDNLLCDTYPWGELKGIRRFIVEFLYFGIKEARACLFAGLFFISIF CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVPHGGLFGIPRYDVLLIIALGIQFFMIWSRLETLDEAKAILLFHIVGFALEVFKTSSAI HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSWSYPDFAYSKVLGVPLFSGFMYAAVGSYIIQAWRLLDVRIRHYPTYWMATLIGIAIYA HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH NFFTHHFIGDYRWYIAACAIGLYSRATVVYRPYDRDRKMPLLLSFVLIGFFVWLAENIST HHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FFGIWKYPDQIGAWSVVHIGKWSSWSLLVIMTFTIVAQLKHIKARIHVPE HHHHHCCCHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure STATGPAATRLSVLDNLLCDTYPWGELKGIRRFIVEFLYFGIKEARACLFAGLFFISIF CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVPHGGLFGIPRYDVLLIIALGIQFFMIWSRLETLDEAKAILLFHIVGFALEVFKTSSAI HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSWSYPDFAYSKVLGVPLFSGFMYAAVGSYIIQAWRLLDVRIRHYPTYWMATLIGIAIYA HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH NFFTHHFIGDYRWYIAACAIGLYSRATVVYRPYDRDRKMPLLLSFVLIGFFVWLAENIST HHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FFGIWKYPDQIGAWSVVHIGKWSSWSLLVIMTFTIVAQLKHIKARIHVPE HHHHHCCCHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]