Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is 159184816
Identifier: 159184816
GI number: 159184816
Start: 1551580
End: 1552452
Strand: Direct
Name: 159184816
Synonym: Atu1564
Alternate gene names: NA
Gene position: 1551580-1552452 (Clockwise)
Preceding gene: 159184813
Following gene: 159184819
Centisome position: 54.6
GC content: 59.45
Gene sequence:
>873_bases ATGATTCGAGAAGAAACGGCCTCCCTGCTTCTTTCAGAACTGCGCCGGCTCACCAACGCCGTGGAGCGGCTTGCCGGACC GGCACCCGCTGCAAACGACTGGAATGCGGCGGATTGTTTCGTCTGGGCGCCGCTGAACTCTTTCCTTCAGCCGGTTCCCC GCCCCAACCGCATCGCACTGAAACTCATTCGCGGCGTCGATCATGTGCGTGACATCCTCCACGAAAACACGTTGCGTTTC GCGGAAGGTTTTGCCGCCAACAACGTGCTGCTGTGGGGCGCGCGCGGCATGGGAAAATCCTCGCTGGTGAAGGCCGTTCA CGAAGATGTGCGCGCCGCAAGCGGCGTTTCCCTGAAGCTGGTGGAAGTGCACCGCGAGGACATCCACACCCTGCCCGCTT TGCTCGACATACTGAAAATCTCGGATCAGCGCGTCATTCTGTTTTGCGACGACCTTTCCTTCGATCATGACGACACGGCC TACAAATCGTTGAAGGCGGCCCTTGATGGCGGTATTGAAGGGCGGCCCGACAATGTCCTCTTTTATGCGACCTCCAACCG CCGTCACCTCCTGCCGCGCCATATGATGGAGAACGAACAGTCAACCGCCATCAATCCCTCGGAAGCGGTCGAGGAAAAGG TGTCGCTGTCGGATCGTTTCGGCCTGTGGCTCGGCTTCCACAAATGTAGTCAGGAAGACTATCTGACGATGATCGACAGC TATGCAGAGCATTTCGATCTGGGTCTCGACCGCGACACCCTCCATCACGAAGCCCTGGAATGGGCGACGACCCGTGGCGG GCGCTCGGGTCGCGTGGCATGGCAATATATCCAGGATGCCGCCGGCCGCCTCAGGAAACCGCTCGACAGATAG
Upstream 100 bases:
>100_bases CGTACCGATTCCGGACCTCTTAGCCTTTATGGGCCGGAAACACCATGCTAGGCCGGGCGCAAAACAGAGTTTTGAACACC AGACAAGCGGAAGAAACACC
Downstream 100 bases:
>100_bases GCGCTCTACAGCGCTTCGTCGACCCTTGCTCCGGCACGCCTTATAATACGGGCGGGAACCCCGACAACAACGCAGTCTGC CGGGATATTTTTGACGACAA
Product: hypothetical protein
Products: NA
Alternate protein names: ATP-Dependent Protease Subunit; AAA ATPase Family Protein; AAA Family ATPase; ABC Transporter ATPase; ATPase Family Protein; ATPase Of AAA+ Class; Intermediate Filament Protein; AAA+ Superfamily ATPase; AAA ATPase Superfamily
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MIREETASLLLSELRRLTNAVERLAGPAPAANDWNAADCFVWAPLNSFLQPVPRPNRIALKLIRGVDHVRDILHENTLRF AEGFAANNVLLWGARGMGKSSLVKAVHEDVRAASGVSLKLVEVHREDIHTLPALLDILKISDQRVILFCDDLSFDHDDTA YKSLKAALDGGIEGRPDNVLFYATSNRRHLLPRHMMENEQSTAINPSEAVEEKVSLSDRFGLWLGFHKCSQEDYLTMIDS YAEHFDLGLDRDTLHHEALEWATTRGGRSGRVAWQYIQDAAGRLRKPLDR
Sequences:
>Translated_290_residues MIREETASLLLSELRRLTNAVERLAGPAPAANDWNAADCFVWAPLNSFLQPVPRPNRIALKLIRGVDHVRDILHENTLRF AEGFAANNVLLWGARGMGKSSLVKAVHEDVRAASGVSLKLVEVHREDIHTLPALLDILKISDQRVILFCDDLSFDHDDTA YKSLKAALDGGIEGRPDNVLFYATSNRRHLLPRHMMENEQSTAINPSEAVEEKVSLSDRFGLWLGFHKCSQEDYLTMIDS YAEHFDLGLDRDTLHHEALEWATTRGGRSGRVAWQYIQDAAGRLRKPLDR >Mature_290_residues MIREETASLLLSELRRLTNAVERLAGPAPAANDWNAADCFVWAPLNSFLQPVPRPNRIALKLIRGVDHVRDILHENTLRF AEGFAANNVLLWGARGMGKSSLVKAVHEDVRAASGVSLKLVEVHREDIHTLPALLDILKISDQRVILFCDDLSFDHDDTA YKSLKAALDGGIEGRPDNVLFYATSNRRHLLPRHMMENEQSTAINPSEAVEEKVSLSDRFGLWLGFHKCSQEDYLTMIDS YAEHFDLGLDRDTLHHEALEWATTRGGRSGRVAWQYIQDAAGRLRKPLDR
Specific function: Unknown
COG id: COG2607
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32652; Mature: 32652
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIREETASLLLSELRRLTNAVERLAGPAPAANDWNAADCFVWAPLNSFLQPVPRPNRIAL CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCHHHHHCCCCCCCHHHH KLIRGVDHVRDILHENTLRFAEGFAANNVLLWGARGMGKSSLVKAVHEDVRAASGVSLKL HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEE VEVHREDIHTLPALLDILKISDQRVILFCDDLSFDHDDTAYKSLKAALDGGIEGRPDNVL HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCEE FYATSNRRHLLPRHMMENEQSTAINPSEAVEEKVSLSDRFGLWLGFHKCSQEDYLTMIDS EEEECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH YAEHFDLGLDRDTLHHEALEWATTRGGRSGRVAWQYIQDAAGRLRKPLDR HHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIREETASLLLSELRRLTNAVERLAGPAPAANDWNAADCFVWAPLNSFLQPVPRPNRIAL CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCHHHHHCCCCCCCHHHH KLIRGVDHVRDILHENTLRFAEGFAANNVLLWGARGMGKSSLVKAVHEDVRAASGVSLKL HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEE VEVHREDIHTLPALLDILKISDQRVILFCDDLSFDHDDTAYKSLKAALDGGIEGRPDNVL HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCEE FYATSNRRHLLPRHMMENEQSTAINPSEAVEEKVSLSDRFGLWLGFHKCSQEDYLTMIDS EEEECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH YAEHFDLGLDRDTLHHEALEWATTRGGRSGRVAWQYIQDAAGRLRKPLDR HHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA