Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is yecE [C]
Identifier: 159184793
GI number: 159184793
Start: 1505366
End: 1506166
Strand: Direct
Name: yecE [C]
Synonym: Atu1514
Alternate gene names: 159184793
Gene position: 1505366-1506166 (Clockwise)
Preceding gene: 159184792
Following gene: 159184794
Centisome position: 52.98
GC content: 58.05
Gene sequence:
>801_bases ATGTCGACATCAGGAACAATCCGCACGGGTATCGGCGGCTGGACTTTCGAGCCCTGGGAAGGCACGTTTTATCCGGAAAA ACTGACGAAGAAACGTCAGCTCGAACATGCCAGCCGGCAATTGACGGCAATAGAGGTGAACGGCACCTATTACAGCAGTC AGAAGCCGGAAACTTTCGCCAAGTGGGCTTCCGAAGTCCCCGACGACTTCATCTTCTCGCTAAAGGCGAGCCGCTTCGTC ACCAATCGCAGGGTTCTGGCCGAAGCCGGTGAATCCATGACGAAGTTCCTGACGCAGGGTCTGACGGAACTCGGGTCTCA TCTTGGCCCGATCCTCTGGCAGTTCGCGCCCACGAAGAAATTCGATGCGGATGATTTCGGCGCTTTTCTGGCGCTGCTGC CGGAAAAACAGGACGGCATTTCCCTGCGGCATGTGGTCGAGGTGCGCAACGAGACATTTCAGGTACCGGAATTCATCGAT CTCATCGCCAAATACAAGGTCGCCGTCGTCTGCGCCGATCATCACGATTATCCGATGCTGCCGGATGTGACCGCCGACTT CGTCTATTGCCGTCTGCAGAAGGGCGAGGACGATATCAAGACCTGTTATCCGCAGACCGGGATCAGCGACTGGGCCAAAC GGCTCAAGACCTATGCGGCGGGCGGCGTGCCTGATGACCTGCCGCTGACCGCGCCCGGGCGGAAGGTCGAAAAGACCCAG CGCGACGTCTTTGCCTTCTTCATCACCGGCGGCAAGATCAATGCGCCCGTGGGTGCGCAGGAACTGCAAAAAGCGGTCTG A
Upstream 100 bases:
>100_bases AACTTCTCGACCGCCGGCCGGCCGGGAAACGCGAGGCTGCGGAGTAATCCGCAGCTTTGGCAAAGGTTCAAAAGGCCAAA AGCCTGTGGAGGAACAGCAT
Downstream 100 bases:
>100_bases GGCGTCTCAGCCGGCCAGTTCTTTCATCGGGTTGAAATCGATGGCGGCGAAAGCTGCCTCGATCACCTCCGGCCCCGCTC CCGGCCTGGTGGCATCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MSTSGTIRTGIGGWTFEPWEGTFYPEKLTKKRQLEHASRQLTAIEVNGTYYSSQKPETFAKWASEVPDDFIFSLKASRFV TNRRVLAEAGESMTKFLTQGLTELGSHLGPILWQFAPTKKFDADDFGAFLALLPEKQDGISLRHVVEVRNETFQVPEFID LIAKYKVAVVCADHHDYPMLPDVTADFVYCRLQKGEDDIKTCYPQTGISDWAKRLKTYAAGGVPDDLPLTAPGRKVEKTQ RDVFAFFITGGKINAPVGAQELQKAV
Sequences:
>Translated_266_residues MSTSGTIRTGIGGWTFEPWEGTFYPEKLTKKRQLEHASRQLTAIEVNGTYYSSQKPETFAKWASEVPDDFIFSLKASRFV TNRRVLAEAGESMTKFLTQGLTELGSHLGPILWQFAPTKKFDADDFGAFLALLPEKQDGISLRHVVEVRNETFQVPEFID LIAKYKVAVVCADHHDYPMLPDVTADFVYCRLQKGEDDIKTCYPQTGISDWAKRLKTYAAGGVPDDLPLTAPGRKVEKTQ RDVFAFFITGGKINAPVGAQELQKAV >Mature_265_residues STSGTIRTGIGGWTFEPWEGTFYPEKLTKKRQLEHASRQLTAIEVNGTYYSSQKPETFAKWASEVPDDFIFSLKASRFVT NRRVLAEAGESMTKFLTQGLTELGSHLGPILWQFAPTKKFDADDFGAFLALLPEKQDGISLRHVVEVRNETFQVPEFIDL IAKYKVAVVCADHHDYPMLPDVTADFVYCRLQKGEDDIKTCYPQTGISDWAKRLKTYAAGGVPDDLPLTAPGRKVEKTQR DVFAFFITGGKINAPVGAQELQKAV
Specific function: Unknown
COG id: COG1801
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29749; Mature: 29618
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSGTIRTGIGGWTFEPWEGTFYPEKLTKKRQLEHASRQLTAIEVNGTYYSSQKPETFA CCCCCCEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHCEEEEEEECCEEECCCCCHHHH KWASEVPDDFIFSLKASRFVTNRRVLAEAGESMTKFLTQGLTELGSHLGPILWQFAPTKK HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC FDADDFGAFLALLPEKQDGISLRHVVEVRNETFQVPEFIDLIAKYKVAVVCADHHDYPML CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHEEEEEEECCCCCCCC PDVTADFVYCRLQKGEDDIKTCYPQTGISDWAKRLKTYAAGGVPDDLPLTAPGRKVEKTQ CCCHHCEEEEEECCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH RDVFAFFITGGKINAPVGAQELQKAV HCEEEEEEECCEECCCCCHHHHHHCC >Mature Secondary Structure STSGTIRTGIGGWTFEPWEGTFYPEKLTKKRQLEHASRQLTAIEVNGTYYSSQKPETFA CCCCCEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHCEEEEEEECCEEECCCCCHHHH KWASEVPDDFIFSLKASRFVTNRRVLAEAGESMTKFLTQGLTELGSHLGPILWQFAPTKK HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC FDADDFGAFLALLPEKQDGISLRHVVEVRNETFQVPEFIDLIAKYKVAVVCADHHDYPML CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHEEEEEEECCCCCCCC PDVTADFVYCRLQKGEDDIKTCYPQTGISDWAKRLKTYAAGGVPDDLPLTAPGRKVEKTQ CCCHHCEEEEEECCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH RDVFAFFITGGKINAPVGAQELQKAV HCEEEEEEECCEECCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA