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The map label for this gene is ycgM [C]

Identifier: 159184794

GI number: 159184794

Start: 1507322

End: 1508011

Strand: Direct

Name: ycgM [C]

Synonym: Atu1516

Alternate gene names: 159184794

Gene position: 1507322-1508011 (Clockwise)

Preceding gene: 159184793

Following gene: 159184795

Centisome position: 53.05

GC content: 62.03

Gene sequence:

>690_bases
ATGGCCGCCACCGTCATCCCCGCTCCGAAACCCGTTCTGCTGCCCGTCGAAGGCACGGACGACATGTTCCCCGTGCGGCG
GGTCTACTGCGTCGGCCGCAATTATGCCGATCACGCCATCGAGATGGGCCACGATCCCTCGCGTGAACCGCCCTTTTATT
TCCAGAAGAACCCGGACAATCTGCTGCCAGCAGGTAATGATTTCCCCTACCCGCCGCTATCCTCCAACGTGCATTACGAA
GTCGAGTGCGTCGTCGTCCTGAAGAGCGGCGGCGCGGATATTCCGGCGTCGGAAGCGCTGAACCACGTCTGGGGTTACGC
CGTCGGCATCGACATGACCCGCCGCGACCTGCAGGATGGGTTGAAGAAAATGGGGCGCTCATGGGAAGGCGCCAAGGCGT
TTGAACATTCCGCACCAGTCTCTGCCATCGTTCCCGCCGATAAAATCGGCCATCCCGCTACCGGCGCGATCTGGCTCGAT
GTCAACGGCGAACGCAAGCAGACGGGCGATCTCGCCCAGATGATCTGGAAGGTGCCGGAAGTGATTGCCGAGCTTTCCAA
GCTGTTCACCCTTGCCGCCGGGGATGTGATCATGACCGGCACGCCGGCGGGCGTCGGCCCCATTGTGCGTGGTGACAGGA
TCGAGTGTGGCGTCGATGGTGTCGGCACGCTCTCGGTCAAAATCGCCTGA

Upstream 100 bases:

>100_bases
CGTAAAAAGCCAGTTTTGCAGGCAAGGTCATTTTGAACTGGAAATCGCCCCGGAATCGCGGGACAAGACTTGCAGCTTCA
AGAGACGACAGGAAATCCCC

Downstream 100 bases:

>100_bases
TCGGCAGGAAACGCAAAGGGAGGACACCGCCATGCCGCTTTACCGCCTTGCCGACCGGGTACCACAGACCCCCGCCCCTG
ATCGTTACTGGATTGCTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MAATVIPAPKPVLLPVEGTDDMFPVRRVYCVGRNYADHAIEMGHDPSREPPFYFQKNPDNLLPAGNDFPYPPLSSNVHYE
VECVVVLKSGGADIPASEALNHVWGYAVGIDMTRRDLQDGLKKMGRSWEGAKAFEHSAPVSAIVPADKIGHPATGAIWLD
VNGERKQTGDLAQMIWKVPEVIAELSKLFTLAAGDVIMTGTPAGVGPIVRGDRIECGVDGVGTLSVKIA

Sequences:

>Translated_229_residues
MAATVIPAPKPVLLPVEGTDDMFPVRRVYCVGRNYADHAIEMGHDPSREPPFYFQKNPDNLLPAGNDFPYPPLSSNVHYE
VECVVVLKSGGADIPASEALNHVWGYAVGIDMTRRDLQDGLKKMGRSWEGAKAFEHSAPVSAIVPADKIGHPATGAIWLD
VNGERKQTGDLAQMIWKVPEVIAELSKLFTLAAGDVIMTGTPAGVGPIVRGDRIECGVDGVGTLSVKIA
>Mature_228_residues
AATVIPAPKPVLLPVEGTDDMFPVRRVYCVGRNYADHAIEMGHDPSREPPFYFQKNPDNLLPAGNDFPYPPLSSNVHYEV
ECVVVLKSGGADIPASEALNHVWGYAVGIDMTRRDLQDGLKKMGRSWEGAKAFEHSAPVSAIVPADKIGHPATGAIWLDV
NGERKQTGDLAQMIWKVPEVIAELSKLFTLAAGDVIMTGTPAGVGPIVRGDRIECGVDGVGTLSVKIA

Specific function: Unknown

COG id: COG0179

COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAH family [H]

Homologues:

Organism=Homo sapiens, GI13654274, Length=203, Percent_Identity=42.8571428571429, Blast_Score=172, Evalue=2e-43,
Organism=Homo sapiens, GI215422413, Length=200, Percent_Identity=43.5, Blast_Score=169, Evalue=1e-42,
Organism=Homo sapiens, GI66348062, Length=206, Percent_Identity=43.6893203883495, Blast_Score=169, Evalue=2e-42,
Organism=Homo sapiens, GI156231349, Length=227, Percent_Identity=34.8017621145374, Blast_Score=126, Evalue=1e-29,
Organism=Homo sapiens, GI40786394, Length=210, Percent_Identity=34.2857142857143, Blast_Score=119, Evalue=2e-27,
Organism=Escherichia coli, GI1787428, Length=199, Percent_Identity=41.7085427135678, Blast_Score=151, Evalue=4e-38,
Organism=Caenorhabditis elegans, GI17557057, Length=192, Percent_Identity=38.5416666666667, Blast_Score=148, Evalue=3e-36,
Organism=Saccharomyces cerevisiae, GI6324161, Length=223, Percent_Identity=29.1479820627803, Blast_Score=111, Evalue=1e-25,
Organism=Drosophila melanogaster, GI28571789, Length=203, Percent_Identity=33.0049261083744, Blast_Score=124, Evalue=5e-29,
Organism=Drosophila melanogaster, GI28572127, Length=210, Percent_Identity=31.4285714285714, Blast_Score=102, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24663695, Length=207, Percent_Identity=28.9855072463768, Blast_Score=85, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: NA

Molecular weight: Translated: 24567; Mature: 24436

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAATVIPAPKPVLLPVEGTDDMFPVRRVYCVGRNYADHAIEMGHDPSREPPFYFQKNPDN
CCCCCCCCCCCEEEEECCCCCCCHHHEEEEECCCCHHHHHCCCCCCCCCCCEEEECCCCC
LLPAGNDFPYPPLSSNVHYEVECVVVLKSGGADIPASEALNHVWGYAVGIDMTRRDLQDG
CCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHEEEECCHHHHHHHHH
LKKMGRSWEGAKAFEHSAPVSAIVPADKIGHPATGAIWLDVNGERKQTGDLAQMIWKVPE
HHHHCCCCCCCHHHHCCCCCEEECCHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
VIAELSKLFTLAAGDVIMTGTPAGVGPIVRGDRIECGVDGVGTLSVKIA
HHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEEC
>Mature Secondary Structure 
AATVIPAPKPVLLPVEGTDDMFPVRRVYCVGRNYADHAIEMGHDPSREPPFYFQKNPDN
CCCCCCCCCCEEEEECCCCCCCHHHEEEEECCCCHHHHHCCCCCCCCCCCEEEECCCCC
LLPAGNDFPYPPLSSNVHYEVECVVVLKSGGADIPASEALNHVWGYAVGIDMTRRDLQDG
CCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHEEEECCHHHHHHHHH
LKKMGRSWEGAKAFEHSAPVSAIVPADKIGHPATGAIWLDVNGERKQTGDLAQMIWKVPE
HHHHCCCCCCCHHHHCCCCCEEECCHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
VIAELSKLFTLAAGDVIMTGTPAGVGPIVRGDRIECGVDGVGTLSVKIA
HHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]