Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

Click here to switch to the map view.

The map label for this gene is 159184765

Identifier: 159184765

GI number: 159184765

Start: 1449024

End: 1449611

Strand: Reverse

Name: 159184765

Synonym: Atu1453

Alternate gene names: NA

Gene position: 1449611-1449024 (Counterclockwise)

Preceding gene: 159184768

Following gene: 159184764

Centisome position: 51.01

GC content: 56.12

Gene sequence:

>588_bases
TTGACCAGCCAGTCGCTCGCCGCCCGCCTCCTCGATGTTATCGAACACGAAATCCTGCCCCTGACGGCTCGCGGCGTCAG
CCTCGGCAACAAGGTTTTCGGAGCGGCGATCCTGCGCAAATCAGATCTGTCGCTCGTCGTTGCCGAGACCAATAATGAGC
TGGAGAATCCGCTCTGGCATGGTGAAGTGCATACGCTGAAGCGATTTTACGAGCTGGGCGAAAAGCCGAATACCAAGGAC
CTGATTTTCCTCTCCACCCACGAACCCTGCACCATGTGCATGTCGGCCATCACCTGGGCCGGCTTCGATAATTTCTATTC
CTTCTTCAGCCACGAGGATTCGCGCGACGCTTTCGCGATCCCGCACGACCTGAAAATCCTCAAGGAAGTTTTCGGGCTGG
AGCCGGGCGGATATCGCCGCAGCAACGCCTTCTGGAATTCTTTCTTCGTCGCCGATCTGGTGGAGAGCGAAGACGATCCG
TTGAAAACCACGCTGAAGGCCCAGACGGCCCGCATCAAGGCCGCTTATGATGATCTCTCCACCACCTATCAATCATCCAA
GAGCGACAACGATATTCCGCTGAATTAA

Upstream 100 bases:

>100_bases
TGACAAAGCGGGTGCCCGCGCCGAACAAGGAATGACAATCACCTGTCGATTTTCCCATGCGAAGACCGCTTTCCTCAAAG
CGGAACGAAGGATCAGACCC

Downstream 100 bases:

>100_bases
GCATTTCCAGGGAAAACTGCGTAGCGGTTTTCCGCCCGGACAATGCGTAATATTAAAAATGAAGGTTTAGACACGATGGA
AGCCTCGAAGGATATTTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: Deoxycytidylate Deaminase Family Protein; DCMP Deaminase

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MTSQSLAARLLDVIEHEILPLTARGVSLGNKVFGAAILRKSDLSLVVAETNNELENPLWHGEVHTLKRFYELGEKPNTKD
LIFLSTHEPCTMCMSAITWAGFDNFYSFFSHEDSRDAFAIPHDLKILKEVFGLEPGGYRRSNAFWNSFFVADLVESEDDP
LKTTLKAQTARIKAAYDDLSTTYQSSKSDNDIPLN

Sequences:

>Translated_195_residues
MTSQSLAARLLDVIEHEILPLTARGVSLGNKVFGAAILRKSDLSLVVAETNNELENPLWHGEVHTLKRFYELGEKPNTKD
LIFLSTHEPCTMCMSAITWAGFDNFYSFFSHEDSRDAFAIPHDLKILKEVFGLEPGGYRRSNAFWNSFFVADLVESEDDP
LKTTLKAQTARIKAAYDDLSTTYQSSKSDNDIPLN
>Mature_194_residues
TSQSLAARLLDVIEHEILPLTARGVSLGNKVFGAAILRKSDLSLVVAETNNELENPLWHGEVHTLKRFYELGEKPNTKDL
IFLSTHEPCTMCMSAITWAGFDNFYSFFSHEDSRDAFAIPHDLKILKEVFGLEPGGYRRSNAFWNSFFVADLVESEDDPL
KTTLKAQTARIKAAYDDLSTTYQSSKSDNDIPLN

Specific function: Unknown

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21921; Mature: 21790

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSQSLAARLLDVIEHEILPLTARGVSLGNKVFGAAILRKSDLSLVVAETNNELENPLWH
CCHHHHHHHHHHHHHHHHCCEECCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC
GEVHTLKRFYELGEKPNTKDLIFLSTHEPCTMCMSAITWAGFDNFYSFFSHEDSRDAFAI
CHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCEEC
PHDLKILKEVFGLEPGGYRRSNAFWNSFFVADLVESEDDPLKTTLKAQTARIKAAYDDLS
CHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
TTYQSSKSDNDIPLN
HHHHCCCCCCCCCCC
>Mature Secondary Structure 
TSQSLAARLLDVIEHEILPLTARGVSLGNKVFGAAILRKSDLSLVVAETNNELENPLWH
CHHHHHHHHHHHHHHHHCCEECCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC
GEVHTLKRFYELGEKPNTKDLIFLSTHEPCTMCMSAITWAGFDNFYSFFSHEDSRDAFAI
CHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCEEC
PHDLKILKEVFGLEPGGYRRSNAFWNSFFVADLVESEDDPLKTTLKAQTARIKAAYDDLS
CHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
TTYQSSKSDNDIPLN
HHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA