Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is hflx [H]
Identifier: 159184763
GI number: 159184763
Start: 1446573
End: 1447907
Strand: Direct
Name: hflx [H]
Synonym: Atu1451
Alternate gene names: 159184763
Gene position: 1446573-1447907 (Clockwise)
Preceding gene: 17935350
Following gene: 159184766
Centisome position: 50.91
GC content: 60.67
Gene sequence:
>1335_bases ATGCGCGCGGTCGTTCTTGTACCCTTCCTCAAGCAGCAGCGCGAAAATCGTGACGCGGCATCAGCCCCGGCTGCTCCCGG CCGTTCCGTCGAAGCCAAGCTTGAGGAAGCGAAGGGTCTGGCGCTTGCCATCGATCTCGAGGTGACCCAGGGGCTCGTCG TTCCCGTCAACCAGCCGCGTCCCGCAACCCTGTTCGGAACCGGCAAGATCGAGGAAATCGGTCATCTCTTGGATGAAACC AATTCCGGCCTGGTGATTGTCGATCATCCGCTCACCCCGGTGCAGCAGCGCAATCTCGAAAAGCAGTGGAACGCCAAGGT TATCGACCGCACCGGTCTGATCCTTGAAATCTTCGGCCGCCGCGCCTCCACCAAGGAAGGCACGCTGCAGGTCGATCTTG CGCATCTGAACTACCAGAAGGGCCGCCTCGTCAGAAGCTGGACCCACCTTGAACGCCAGCGCGGTGGTGCAGGCTTCATG GGTGGCCCGGGTGAAACCCAGATCGAGGCCGACAGACGATTGCTGCAGGATCGCATCGTCAAGCTCGAGAAGGAGCTGGA GCAGGTGGTGCGCACCCGCCAGCTTCACCGCGCCAAGCGCCGCAAAGTGCCGCATCCGATCGTGGCACTTGTTGGCTATA CCAATGCTGGCAAATCCACGCTGTTCAACCGCATCACGGGTGCGGGTGTTCTGGCCGAAGACATGCTGTTCGCTACACTC GACCCGACCCTGCGCCGTATGAAACTGCCGCATGGCCGAACCGTCATCCTGTCGGATACGGTGGGCTTTATTTCCGACCT GCCGACGCATCTCGTCGCCGCTTTCCGCGCAACGCTGGAAGAGGTGCTGGAAGCCGATCTTGTTCTGCACGTGCGTGACA TGTCCGATCCGGACAATGCCGCCCAGTCTGCTGATGTGCTGCGCATTCTTGGCGACCTCGGCATTGACGAGAAGGAAGCC GAAAAGCGCATCATCGAGGTCTGGAACAAGGTCGACCGTCTGGAGCCCGAAGCACACGACGCCATCATGCAGCGCGCCGA AGGCCGCTCAGATATCCGCGCCGTTTCGGCCATCACGGGCGAGGGCGTCGATGCCCTGATGGAAGAGATTTCAAAACGCC TGTCCGGTGTGCTGACGGAAACGACCGTGGTGCTTTCTGTCGAGCAATTGCCGCTGATCTCCTGGGTCTACAGCAATTCC ATCGTCGACAATCGTGAAGATCACGAAGACGGATCGGTTGCGCTGGATGTGCGCCTGTCGGAAGCGCAGGCTGTGGAACT CGAACGGAAGCTTGGAAAGACGGCTGGTCGCGAGCGGGAAGACTGGGAACGCTGA
Upstream 100 bases:
>100_bases AACATTCTTTACATTCTTTCTGGATAAGGCCGAACCCATTTCAACACGCGACACCTCGAGCGAATCGATCATTCCGGAGC AGGAAAAACGCCGCGACGAC
Downstream 100 bases:
>100_bases GCGCTTCTTGAAGGTACAAATTCCGTCAGATGCGACGTCATCCTCGGGCTTGTCCCGAGGATCCGCTACGGTATTCAAAA TCGATAGGCAGCAGATGCCC
Product: GTP-binding protein HFLX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MRAVVLVPFLKQQRENRDAASAPAAPGRSVEAKLEEAKGLALAIDLEVTQGLVVPVNQPRPATLFGTGKIEEIGHLLDET NSGLVIVDHPLTPVQQRNLEKQWNAKVIDRTGLILEIFGRRASTKEGTLQVDLAHLNYQKGRLVRSWTHLERQRGGAGFM GGPGETQIEADRRLLQDRIVKLEKELEQVVRTRQLHRAKRRKVPHPIVALVGYTNAGKSTLFNRITGAGVLAEDMLFATL DPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVLEADLVLHVRDMSDPDNAAQSADVLRILGDLGIDEKEA EKRIIEVWNKVDRLEPEAHDAIMQRAEGRSDIRAVSAITGEGVDALMEEISKRLSGVLTETTVVLSVEQLPLISWVYSNS IVDNREDHEDGSVALDVRLSEAQAVELERKLGKTAGREREDWER
Sequences:
>Translated_444_residues MRAVVLVPFLKQQRENRDAASAPAAPGRSVEAKLEEAKGLALAIDLEVTQGLVVPVNQPRPATLFGTGKIEEIGHLLDET NSGLVIVDHPLTPVQQRNLEKQWNAKVIDRTGLILEIFGRRASTKEGTLQVDLAHLNYQKGRLVRSWTHLERQRGGAGFM GGPGETQIEADRRLLQDRIVKLEKELEQVVRTRQLHRAKRRKVPHPIVALVGYTNAGKSTLFNRITGAGVLAEDMLFATL DPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVLEADLVLHVRDMSDPDNAAQSADVLRILGDLGIDEKEA EKRIIEVWNKVDRLEPEAHDAIMQRAEGRSDIRAVSAITGEGVDALMEEISKRLSGVLTETTVVLSVEQLPLISWVYSNS IVDNREDHEDGSVALDVRLSEAQAVELERKLGKTAGREREDWER >Mature_444_residues MRAVVLVPFLKQQRENRDAASAPAAPGRSVEAKLEEAKGLALAIDLEVTQGLVVPVNQPRPATLFGTGKIEEIGHLLDET NSGLVIVDHPLTPVQQRNLEKQWNAKVIDRTGLILEIFGRRASTKEGTLQVDLAHLNYQKGRLVRSWTHLERQRGGAGFM GGPGETQIEADRRLLQDRIVKLEKELEQVVRTRQLHRAKRRKVPHPIVALVGYTNAGKSTLFNRITGAGVLAEDMLFATL DPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVLEADLVLHVRDMSDPDNAAQSADVLRILGDLGIDEKEA EKRIIEVWNKVDRLEPEAHDAIMQRAEGRSDIRAVSAITGEGVDALMEEISKRLSGVLTETTVVLSVEQLPLISWVYSNS IVDNREDHEDGSVALDVRLSEAQAVELERKLGKTAGREREDWER
Specific function: Unknown
COG id: COG2262
COG function: function code R; GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI310133118, Length=297, Percent_Identity=35.6902356902357, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI310133116, Length=286, Percent_Identity=36.013986013986, Blast_Score=135, Evalue=5e-32, Organism=Homo sapiens, GI310124269, Length=267, Percent_Identity=36.3295880149813, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI310124267, Length=267, Percent_Identity=36.3295880149813, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI310124171, Length=267, Percent_Identity=36.3295880149813, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI310124169, Length=267, Percent_Identity=36.3295880149813, Blast_Score=134, Evalue=2e-31, Organism=Escherichia coli, GI1790615, Length=386, Percent_Identity=45.5958549222798, Blast_Score=290, Evalue=2e-79, Organism=Caenorhabditis elegans, GI17561038, Length=419, Percent_Identity=31.5035799522673, Blast_Score=193, Evalue=1e-49, Organism=Drosophila melanogaster, GI24650079, Length=427, Percent_Identity=31.8501170960187, Blast_Score=160, Evalue=2e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR016496 - InterPro: IPR006073 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 49300; Mature: 49300
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAVVLVPFLKQQRENRDAASAPAAPGRSVEAKLEEAKGLALAIDLEVTQGLVVPVNQPR CCEEEEEHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEEEEECCCEEEECCCCC PATLFGTGKIEEIGHLLDETNSGLVIVDHPLTPVQQRNLEKQWNAKVIDRTGLILEIFGR CCEEEECCCHHHHHHHHHCCCCCEEEECCCCCCHHHHCCHHHCCCEEECCCCHHHEECCC RASTKEGTLQVDLAHLNYQKGRLVRSWTHLERQRGGAGFMGGPGETQIEADRRLLQDRIV CCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH KLEKELEQVVRTRQLHRAKRRKVPHPIVALVGYTNAGKSTLFNRITGAGVLAEDMLFATL HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHC DPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVLEADLVLHVRDMSDPDNA CHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHH AQSADVLRILGDLGIDEKEAEKRIIEVWNKVDRLEPEAHDAIMQRAEGRSDIRAVSAITG HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCC EGVDALMEEISKRLSGVLTETTVVLSVEQLPLISWVYSNSIVDNREDHEDGSVALDVRLS CCHHHHHHHHHHHHHHHHHHHEEEEEHHHCCHHHHHHHCCCCCCCCCCCCCCEEEEEEEC EAQAVELERKLGKTAGREREDWER CHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MRAVVLVPFLKQQRENRDAASAPAAPGRSVEAKLEEAKGLALAIDLEVTQGLVVPVNQPR CCEEEEEHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEEEEECCCEEEECCCCC PATLFGTGKIEEIGHLLDETNSGLVIVDHPLTPVQQRNLEKQWNAKVIDRTGLILEIFGR CCEEEECCCHHHHHHHHHCCCCCEEEECCCCCCHHHHCCHHHCCCEEECCCCHHHEECCC RASTKEGTLQVDLAHLNYQKGRLVRSWTHLERQRGGAGFMGGPGETQIEADRRLLQDRIV CCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH KLEKELEQVVRTRQLHRAKRRKVPHPIVALVGYTNAGKSTLFNRITGAGVLAEDMLFATL HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHC DPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVLEADLVLHVRDMSDPDNA CHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHH AQSADVLRILGDLGIDEKEAEKRIIEVWNKVDRLEPEAHDAIMQRAEGRSDIRAVSAITG HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCC EGVDALMEEISKRLSGVLTETTVVLSVEQLPLISWVYSNSIVDNREDHEDGSVALDVRLS CCHHHHHHHHHHHHHHHHHHHEEEEEHHHCCHHHHHHHCCCCCCCCCCCCCCEEEEEEEC EAQAVELERKLGKTAGREREDWER CHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8248183; 7610040; 9278503; 2020545; 3040675 [H]