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The map label for this gene is yecS [H]

Identifier: 159184744

GI number: 159184744

Start: 1392640

End: 1393344

Strand: Reverse

Name: yecS [H]

Synonym: Atu1398

Alternate gene names: 159184744

Gene position: 1393344-1392640 (Counterclockwise)

Preceding gene: 159184745

Following gene: 15888723

Centisome position: 49.03

GC content: 58.16

Gene sequence:

>705_bases
ATGAATTTTTCACTTCACTTCGAGGCCGTGTTTGCTGAATCGGATCTGATCTGGCGCGGCATCCTGCTGACGATAGGCCT
GTCGGCAACCGCGATCGTCCTCGGTACGATGATCGCCGTGGCGCTGGTCGCCATGCGCAGTCTCGGCAACGGCACCATCC
GCTTCTGCGTCGATTCCTATGTCGAACTGCTCAGGAACACGCCATTTCTCGTCCAGCTCTTCATGGTTTTCTTCGGACTG
CCGCTCGTCGGCTTTCGCATGTCCGGGACACAAGCCGCACTCTTTGCCATGACGCTCAACCTTTCGGCCTATGCGACGGA
GATCATTCGCGCCGGCGTGGAGTCCATACACCGCTCACAGGTCGAGGCGGGCCTGTCGCTCTCGCTCAGCCGCCTTCAGG
TGTTTCGTTACGTCGTGATGAAACCGGCCTTTGCAAAAATATGGCCGGCGCTGTCCAGCCAGTTCGTGCTGATGCTTCTG
GCATCGAGCATCTGCTCCTTCATCTCTGTGCCGGAGCTCTCCGGTGCGGCTTCGATCATCGAGCAACGGACGTTTCGAAG
CTTTGAGACCTACATCGTCGTGACCGTCATCTACCTCCTTCTCGCGCTGGCGCTGAAAATCATTCTCGCATGGTTCGGTC
ACTGGCTGTTCCGCCGCCGCGTCAAGGTTTTCTCCCCGATGACCGTCCAGGAAGGAATTGCCTGA

Upstream 100 bases:

>100_bases
GCACGCCCCTGCCCGTTCTCCCGACATTCTGATCGGACGGCAAAACTCCGGCGCGCCCTTCCACAGGCGCGCCGGAACAG
CGTATTCGGGAGGAGCCAGC

Downstream 100 bases:

>100_bases
TGTCCACATTCGGTTGGCCTGAATTTCTTTTCCTGCTTCGTGGGGCCGGCTGGTCCATCGTCCTGACCGCCATTGCCTTC
AGCATCGGCTCGCTGACGGG

Product: ABC transporter, membrane spanning protein (amino acid)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MNFSLHFEAVFAESDLIWRGILLTIGLSATAIVLGTMIAVALVAMRSLGNGTIRFCVDSYVELLRNTPFLVQLFMVFFGL
PLVGFRMSGTQAALFAMTLNLSAYATEIIRAGVESIHRSQVEAGLSLSLSRLQVFRYVVMKPAFAKIWPALSSQFVLMLL
ASSICSFISVPELSGAASIIEQRTFRSFETYIVVTVIYLLLALALKIILAWFGHWLFRRRVKVFSPMTVQEGIA

Sequences:

>Translated_234_residues
MNFSLHFEAVFAESDLIWRGILLTIGLSATAIVLGTMIAVALVAMRSLGNGTIRFCVDSYVELLRNTPFLVQLFMVFFGL
PLVGFRMSGTQAALFAMTLNLSAYATEIIRAGVESIHRSQVEAGLSLSLSRLQVFRYVVMKPAFAKIWPALSSQFVLMLL
ASSICSFISVPELSGAASIIEQRTFRSFETYIVVTVIYLLLALALKIILAWFGHWLFRRRVKVFSPMTVQEGIA
>Mature_234_residues
MNFSLHFEAVFAESDLIWRGILLTIGLSATAIVLGTMIAVALVAMRSLGNGTIRFCVDSYVELLRNTPFLVQLFMVFFGL
PLVGFRMSGTQAALFAMTLNLSAYATEIIRAGVESIHRSQVEAGLSLSLSRLQVFRYVVMKPAFAKIWPALSSQFVLMLL
ASSICSFISVPELSGAASIIEQRTFRSFETYIVVTVIYLLLALALKIILAWFGHWLFRRRVKVFSPMTVQEGIA

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=202, Percent_Identity=30.6930693069307, Blast_Score=110, Evalue=9e-26,
Organism=Escherichia coli, GI1787030, Length=220, Percent_Identity=30, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1788645, Length=196, Percent_Identity=27.5510204081633, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1786874, Length=220, Percent_Identity=24.0909090909091, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1786873, Length=200, Percent_Identity=24, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1787087, Length=211, Percent_Identity=24.6445497630332, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1788646, Length=202, Percent_Identity=22.7722772277228, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 25972; Mature: 25972

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFSLHFEAVFAESDLIWRGILLTIGLSATAIVLGTMIAVALVAMRSLGNGTIRFCVDSY
CCCEEEEHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
VELLRNTPFLVQLFMVFFGLPLVGFRMSGTQAALFAMTLNLSAYATEIIRAGVESIHRSQ
HHHHHCCHHHHHHHHHHHCCHHHCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEAGLSLSLSRLQVFRYVVMKPAFAKIWPALSSQFVLMLLASSICSFISVPELSGAASII
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
EQRTFRSFETYIVVTVIYLLLALALKIILAWFGHWLFRRRVKVFSPMTVQEGIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC
>Mature Secondary Structure
MNFSLHFEAVFAESDLIWRGILLTIGLSATAIVLGTMIAVALVAMRSLGNGTIRFCVDSY
CCCEEEEHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
VELLRNTPFLVQLFMVFFGLPLVGFRMSGTQAALFAMTLNLSAYATEIIRAGVESIHRSQ
HHHHHCCHHHHHHHHHHHCCHHHCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEAGLSLSLSRLQVFRYVVMKPAFAKIWPALSSQFVLMLLASSICSFISVPELSGAASII
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
EQRTFRSFETYIVVTVIYLLLALALKIILAWFGHWLFRRRVKVFSPMTVQEGIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]