Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184721
Identifier: 159184721
GI number: 159184721
Start: 1332708
End: 1333178
Strand: Direct
Name: 159184721
Synonym: Atu1343
Alternate gene names: NA
Gene position: 1332708-1333178 (Clockwise)
Preceding gene: 15888668
Following gene: 159184722
Centisome position: 46.9
GC content: 61.57
Gene sequence:
>471_bases ATGAAACAGGCGCTTTATATCGTCGACGTCCAGCCGAGCTTCAATCCGCCGGCCTCGCTGGTGGCGGAGATATCCGCGCT CGCCGGAACCATGCCAAGTATCGCCACCGTCGAACGCCACGATGAAAGCGTAACGCCCTTCGAACGGCAACTGGGCTGGA AACCGGGCAGGGATGATGTGTCGCTGGTGCCGGCAGACCGCATATTCATCAAACACGGTTATGGGCCGCCCCGGGAGGTT ATCGACCATCTCCTGTCCCTGAAACTCGACCGGGTGCTGGTCTGCGGCATTCAGGCCGATACCTGCGTGCTGGCGGCCGG TTTTGCCCTGTTCGATGCAGGGCTGCATCCCACACTTCTGCCATGGCTGACGGTGGGCTCCAGTCTCGACCGCAGCGGTG AACTTGGCGCGAGACTATGGAAGCATCATTTCGGAGCGGTTCTCACAGGGCCGGAGGCACTTGCGGGGTAG
Upstream 100 bases:
>100_bases ATGTGGAGGTCTCGGATATCGATTAAGACGCCCCGGCGCGTCGATCGGAAATTTGCCCCTCGCAAACCCGTTGCGAGGGG TTTTTCGTTGGAGGATACAC
Downstream 100 bases:
>100_bases CCTCGCCGAACCTGCGTAACGGTCCGATCAGTTCGAGGCTTTCTCGACCTTCATCTCACCCAGCTCATCGATCAGGATCG TCCAGCTGTCCGCTTCCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MKQALYIVDVQPSFNPPASLVAEISALAGTMPSIATVERHDESVTPFERQLGWKPGRDDVSLVPADRIFIKHGYGPPREV IDHLLSLKLDRVLVCGIQADTCVLAAGFALFDAGLHPTLLPWLTVGSSLDRSGELGARLWKHHFGAVLTGPEALAG
Sequences:
>Translated_156_residues MKQALYIVDVQPSFNPPASLVAEISALAGTMPSIATVERHDESVTPFERQLGWKPGRDDVSLVPADRIFIKHGYGPPREV IDHLLSLKLDRVLVCGIQADTCVLAAGFALFDAGLHPTLLPWLTVGSSLDRSGELGARLWKHHFGAVLTGPEALAG >Mature_156_residues MKQALYIVDVQPSFNPPASLVAEISALAGTMPSIATVERHDESVTPFERQLGWKPGRDDVSLVPADRIFIKHGYGPPREV IDHLLSLKLDRVLVCGIQADTCVLAAGFALFDAGLHPTLLPWLTVGSSLDRSGELGARLWKHHFGAVLTGPEALAG
Specific function: Unknown
COG id: COG1335
COG function: function code Q; Amidases related to nicotinamidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16787; Mature: 16787
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQALYIVDVQPSFNPPASLVAEISALAGTMPSIATVERHDESVTPFERQLGWKPGRDDV CCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHCCCCCCCCCC SLVPADRIFIKHGYGPPREVIDHLLSLKLDRVLVCGIQADTCVLAAGFALFDAGLHPTLL EEECCCEEEEECCCCCHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHCCCCCHHH PWLTVGSSLDRSGELGARLWKHHFGAVLTGPEALAG HHHHHCCCCCCCCHHHHHHHHHHCCCEEECCHHHCC >Mature Secondary Structure MKQALYIVDVQPSFNPPASLVAEISALAGTMPSIATVERHDESVTPFERQLGWKPGRDDV CCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHCCCCCCCCCC SLVPADRIFIKHGYGPPREVIDHLLSLKLDRVLVCGIQADTCVLAAGFALFDAGLHPTLL EEECCCEEEEECCCCCHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHCCCCCHHH PWLTVGSSLDRSGELGARLWKHHFGAVLTGPEALAG HHHHHCCCCCCCCHHHHHHHHHHCCCEEECCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA