Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184700
Identifier: 159184700
GI number: 159184700
Start: 1288164
End: 1288403
Strand: Direct
Name: 159184700
Synonym: Atu1298
Alternate gene names: NA
Gene position: 1288164-1288403 (Clockwise)
Preceding gene: 15888624
Following gene: 15888635
Centisome position: 45.33
GC content: 46.67
Gene sequence:
>240_bases CTGAGCCGGCCGCGGGCAATTAACCACGACTGTTTGCGCAGCCTCTCCGGCATATCCCGGCGAAATAGCTATTCGCAAAT CGAAGCCGACGTCGCGAGACCGCAAGCCATTGACCCCAGATGTATTTTATCTCTTTACAATGAAGGGATGAAATCGGGTG GCATTAATAGAGTTCAAGTTGAAAAATACGTTGAATTCAATCTCGTAGAGAACTATAGTGTGCCAGCTTGGTATATTTAA
Upstream 100 bases:
>100_bases GTGGCGCCTTCGGCGCGCCGGACGAAATATTGAAGCAGGCCGACAAGGCGCTTTACGAGGCGAAACATGCCGGACGCAAC CGCGTCGTGGCCGCCGCGGC
Downstream 100 bases:
>100_bases CCATGTTTCTCAGGGAATGTATCTCTGGCTTAAGAATTTGTTGATTTTTATTTTACTTCTGCGCACACTCACAATCGAGA GTAACAGTTCTTCCGGCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MSRPRAINHDCLRSLSGISRRNSYSQIEADVARPQAIDPRCILSLYNEGMKSGGINRVQVEKYVEFNLVENYSVPAWYI
Sequences:
>Translated_79_residues MSRPRAINHDCLRSLSGISRRNSYSQIEADVARPQAIDPRCILSLYNEGMKSGGINRVQVEKYVEFNLVENYSVPAWYI >Mature_78_residues SRPRAINHDCLRSLSGISRRNSYSQIEADVARPQAIDPRCILSLYNEGMKSGGINRVQVEKYVEFNLVENYSVPAWYI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9047; Mature: 8916
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRPRAINHDCLRSLSGISRRNSYSQIEADVARPQAIDPRCILSLYNEGMKSGGINRVQV CCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEH EKYVEFNLVENYSVPAWYI HHHHEECCCCCCCCCEECC >Mature Secondary Structure SRPRAINHDCLRSLSGISRRNSYSQIEADVARPQAIDPRCILSLYNEGMKSGGINRVQV CCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEH EKYVEFNLVENYSVPAWYI HHHHEECCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA