Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is nuoN [H]
Identifier: 159184691
GI number: 159184691
Start: 1270546
End: 1271988
Strand: Direct
Name: nuoN [H]
Synonym: Atu1283
Alternate gene names: 159184691
Gene position: 1270546-1271988 (Clockwise)
Preceding gene: 15888611
Following gene: 15888613
Centisome position: 44.71
GC content: 58.7
Gene sequence:
>1443_bases ATGACCGCTGAAATCCTTTTTGCCAGTCTGCACATCGCGACGCCCGAGCTGATCCTTGCGGTCGGCGCGCTGGCGCTGCT CATGATTGGCGTCTTCTCGGGCGACAAGTCGACAACGACGGTGACCGGCCTTGCCGTTGCCCTCCTGCTCGTCGTCGGTC TCTGGATCATCTTTGCCCCCGCATCGGGCGTGGCCTTCGGCGGTGTTTACATCGCCGATGCATTCGGCAATTTCATGAAG GTGCTGGCGCTGATCGGCTCCATCACCGCCATGATCCTCGCCGTCGGCCAGGGCCGTTTCGAGCCGATCGGTCGTTTCGA ATATCCGGTGCTGCTGGTTCTGGCCACTCTCGGCATCTTGCTGATGATCTCGGCCAACAACATGATCTCGCTCTACATGG CGCTAGAACTGCAGTCGCTGGCCCTCTACGTCGTCTGCGCCATCAACCGCGAGAGCCTGCGCTCCACGGAAGCTGGCCTG AAATACTTCGTTCTCGGCGCGCTCTCCTCCGGCATGCTGCTTTACGGCATGTCGCTGGTTTACGGCTTCACCGGCAATAC CGGCTTCACCGAAATCGCGCAGGTTCTGGCGTCGGAAACGCGCTCGCTCGGCCTCGTCTTTGGTCTGGTCTTCGTTCTCG CCGGTCTTGCGTTCAAGATTTCCGCCGTGCCGTTCCACATGTGGACGCCTGATGTTTATGAAGGTGCGCCGACCCCAGTC ACCGCCTTCCTGTCGGCTGCACCGAAGATCGGCGCCATGGCGATCCTCGTGCGTATCGTCGTCGAGGCTTTCCAGCCGGT CTTTGCCGACTGGCAGCAGATCGTCGTCTTCATCTCCATCGCTTCGATGCTGCTCGGCTCCTTCGCAGCAATCGGCCAGA AGAACATCAAGCGCCTGATGGCCTATTCCTCCATCGGTCACATGGGTTATGCGCTGGTCGGTCTTGCGGCCGGCACCGAA GCCGGTATTTCGGGCGTCATTCTTTACATGACCATCTACATGGTCATGACGCTTGGCACCTTCGCCTGCATTCTCTCCAT GCGCCGCAAGGAAATCGGCAATGTCGAAAATGTTGAGGATCTTGCCGGGCTTTCCTCCACCAATCCCTTCATGGCGGTTG TGTTGACGATCCTGATGTTCTCGCTTGCCGGTATTCCGCCGCTCGCCGGCTTCTTCGGCAAATATTACGTCTTCCTTGCC GCCATCGAAGCGAAGCTTTATCCGCTCGCCATCATCGGTGTGATCGGCTCGGTTGTCGGCGCCTATTATTATATCCGCGT CGTCAAGGTCATGTGGTTCGATGAGGCCAAGGACAAGTTCGAACGTCCGGCCGGTGAACTGAAAGTCGTTTATGCGCTTT CGGCCCTGTTCGTTGTCGCCTTCGTCGTCTTTGGCGGTGCACTTGGCAACGCGGTGACTGTTGCGGCGAAGACCTTCTTT TGA
Upstream 100 bases:
>100_bases AGCCGCATCGGTCGATCTTCTGGTAAACAACTATACGGCTGCATTGCAGGCGGCGCAAAATGTTGCGCTCACTATGAATT GACGACAGGACCCGTTGGAC
Downstream 100 bases:
>100_bases GCAGCACACACAAGCATACGGGCCGGATGTCCATTGATGACTTCCGGCACGAGGCGATGGCGGAGACGCCATCGACCAAT CTGGAATGTTTCGCCCGGGC
Product: NADH dehydrogenase subunit N
Products: NA
Alternate protein names: NADH dehydrogenase I subunit N 1; NDH-1 subunit N 1 [H]
Number of amino acids: Translated: 480; Mature: 479
Protein sequence:
>480_residues MTAEILFASLHIATPELILAVGALALLMIGVFSGDKSTTTVTGLAVALLLVVGLWIIFAPASGVAFGGVYIADAFGNFMK VLALIGSITAMILAVGQGRFEPIGRFEYPVLLVLATLGILLMISANNMISLYMALELQSLALYVVCAINRESLRSTEAGL KYFVLGALSSGMLLYGMSLVYGFTGNTGFTEIAQVLASETRSLGLVFGLVFVLAGLAFKISAVPFHMWTPDVYEGAPTPV TAFLSAAPKIGAMAILVRIVVEAFQPVFADWQQIVVFISIASMLLGSFAAIGQKNIKRLMAYSSIGHMGYALVGLAAGTE AGISGVILYMTIYMVMTLGTFACILSMRRKEIGNVENVEDLAGLSSTNPFMAVVLTILMFSLAGIPPLAGFFGKYYVFLA AIEAKLYPLAIIGVIGSVVGAYYYIRVVKVMWFDEAKDKFERPAGELKVVYALSALFVVAFVVFGGALGNAVTVAAKTFF
Sequences:
>Translated_480_residues MTAEILFASLHIATPELILAVGALALLMIGVFSGDKSTTTVTGLAVALLLVVGLWIIFAPASGVAFGGVYIADAFGNFMK VLALIGSITAMILAVGQGRFEPIGRFEYPVLLVLATLGILLMISANNMISLYMALELQSLALYVVCAINRESLRSTEAGL KYFVLGALSSGMLLYGMSLVYGFTGNTGFTEIAQVLASETRSLGLVFGLVFVLAGLAFKISAVPFHMWTPDVYEGAPTPV TAFLSAAPKIGAMAILVRIVVEAFQPVFADWQQIVVFISIASMLLGSFAAIGQKNIKRLMAYSSIGHMGYALVGLAAGTE AGISGVILYMTIYMVMTLGTFACILSMRRKEIGNVENVEDLAGLSSTNPFMAVVLTILMFSLAGIPPLAGFFGKYYVFLA AIEAKLYPLAIIGVIGSVVGAYYYIRVVKVMWFDEAKDKFERPAGELKVVYALSALFVVAFVVFGGALGNAVTVAAKTFF >Mature_479_residues TAEILFASLHIATPELILAVGALALLMIGVFSGDKSTTTVTGLAVALLLVVGLWIIFAPASGVAFGGVYIADAFGNFMKV LALIGSITAMILAVGQGRFEPIGRFEYPVLLVLATLGILLMISANNMISLYMALELQSLALYVVCAINRESLRSTEAGLK YFVLGALSSGMLLYGMSLVYGFTGNTGFTEIAQVLASETRSLGLVFGLVFVLAGLAFKISAVPFHMWTPDVYEGAPTPVT AFLSAAPKIGAMAILVRIVVEAFQPVFADWQQIVVFISIASMLLGSFAAIGQKNIKRLMAYSSIGHMGYALVGLAAGTEA GISGVILYMTIYMVMTLGTFACILSMRRKEIGNVENVEDLAGLSSTNPFMAVVLTILMFSLAGIPPLAGFFGKYYVFLAA IEAKLYPLAIIGVIGSVVGAYYYIRVVKVMWFDEAKDKFERPAGELKVVYALSALFVVAFVVFGGALGNAVTVAAKTFF
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1007
COG function: function code C; NADH:ubiquinone oxidoreductase subunit 2 (chain N)
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the complex I subunit 2 family [H]
Homologues:
Organism=Homo sapiens, GI251831108, Length=210, Percent_Identity=26.6666666666667, Blast_Score=70, Evalue=3e-12, Organism=Escherichia coli, GI145693160, Length=456, Percent_Identity=35.3070175438597, Blast_Score=215, Evalue=4e-57, Organism=Escherichia coli, GI1788831, Length=394, Percent_Identity=26.6497461928934, Blast_Score=114, Evalue=2e-26, Organism=Escherichia coli, GI1788614, Length=375, Percent_Identity=24.2666666666667, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1788613, Length=239, Percent_Identity=24.2677824267782, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1788827, Length=297, Percent_Identity=26.2626262626263, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI1788829, Length=239, Percent_Identity=25.1046025104602, Blast_Score=67, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010096 - InterPro: IPR001750 [H]
Pfam domain/function: PF00361 Oxidored_q1 [H]
EC number: =1.6.99.5 [H]
Molecular weight: Translated: 50971; Mature: 50839
Theoretical pI: Translated: 7.48; Mature: 7.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAEILFASLHIATPELILAVGALALLMIGVFSGDKSTTTVTGLAVALLLVVGLWIIFAP CCHHHEEHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC ASGVAFGGVYIADAFGNFMKVLALIGSITAMILAVGQGRFEPIGRFEYPVLLVLATLGIL CCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH LMISANNMISLYMALELQSLALYVVCAINRESLRSTEAGLKYFVLGALSSGMLLYGMSLV HHCCCCCHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH YGFTGNTGFTEIAQVLASETRSLGLVFGLVFVLAGLAFKISAVPFHMWTPDVYEGAPTPV HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHCCCCCCHH TAFLSAAPKIGAMAILVRIVVEAFQPVFADWQQIVVFISIASMLLGSFAAIGQKNIKRLM HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYSSIGHMGYALVGLAAGTEAGISGVILYMTIYMVMTLGTFACILSMRRKEIGNVENVED HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH LAGLSSTNPFMAVVLTILMFSLAGIPPLAGFFGKYYVFLAAIEAKLYPLAIIGVIGSVVG HHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYYYIRVVKVMWFDEAKDKFERPAGELKVVYALSALFVVAFVVFGGALGNAVTVAAKTFF HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC >Mature Secondary Structure TAEILFASLHIATPELILAVGALALLMIGVFSGDKSTTTVTGLAVALLLVVGLWIIFAP CHHHEEHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC ASGVAFGGVYIADAFGNFMKVLALIGSITAMILAVGQGRFEPIGRFEYPVLLVLATLGIL CCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH LMISANNMISLYMALELQSLALYVVCAINRESLRSTEAGLKYFVLGALSSGMLLYGMSLV HHCCCCCHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH YGFTGNTGFTEIAQVLASETRSLGLVFGLVFVLAGLAFKISAVPFHMWTPDVYEGAPTPV HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHCCCCCCHH TAFLSAAPKIGAMAILVRIVVEAFQPVFADWQQIVVFISIASMLLGSFAAIGQKNIKRLM HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYSSIGHMGYALVGLAAGTEAGISGVILYMTIYMVMTLGTFACILSMRRKEIGNVENVED HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH LAGLSSTNPFMAVVLTILMFSLAGIPPLAGFFGKYYVFLAAIEAKLYPLAIIGVIGSVVG HHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYYYIRVVKVMWFDEAKDKFERPAGELKVVYALSALFVVAFVVFGGALGNAVTVAAKTFF HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]