Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is ilvA [H]
Identifier: 159184664
GI number: 159184664
Start: 1198612
End: 1199886
Strand: Direct
Name: ilvA [H]
Synonym: Atu1205
Alternate gene names: 159184664
Gene position: 1198612-1199886 (Clockwise)
Preceding gene: 159184662
Following gene: 159184665
Centisome position: 42.18
GC content: 59.06
Gene sequence:
>1275_bases ATGAATTTCAATGGATTGACTATCGTGGACAAGCAGCTTGTGGAAGCAGCGCGGCGGGAAGTGCGGGAGATATTCCCGGA AACGCCGCTGCAGTTGAATGAACATCTCAGCCGTCGCTATGGCGCATCGATTTGGCTGAAGCGTGAGGATCTGTCCCCGG TTCGTTCCTACAAGATTAGAGGCGCATTCAATTTTCTCCGCAAGGCGGTGGCCAAGGCTGGCAAGGACAAGGTTTTCGTC TGCGCGTCCGCCGGCAACCACGCCCAGGGCTTTGCTTTCGCCTGCCGCCATTTCGGCGTTCACGGCGTCGTTTTCATGCC GGTGACGACACCGCAGCAGAAGATCGAAAAAACCCGCATCTTTGGCGGAGAGTTCATCAAGATCCGTCTGGTGGGCGATA TCTTCGACCAGTGTTACGCCGCTGCGCGTCAGCATGTGCAGGACCATGACGGCTACATGGTTCCGCCCTTTGACCATGAG GATATTATCGAAGGCCAGGCGACGGTCGCCGCCGAGATCATGGACCAGCTGCCCGAAGGCACCAAACCTGACATCGTCGT GATGCCTGTCGGTGGTGGCGGTCTTTCGGCCGGCCTGACCGGGTTTCTGGCCGGCACGGTGAAGAAGGAGAACTTCGTGT TCTGCGAGCCGGAAGGCGCGCCCAGCCTGAAAAAGAGCCTGGAACGTGGCGAACCGGTGACGCTGAACAAGGTCGACAAT TTTGTCGATGGTGCCGCCGTTGCCCGCATCGGCGACCTGAACTTCAAGGCGCTGAAGGATTTTCCGGCCGAGCAGGTGAT GCTCATCCCGGAAAATGCGATCTGCGTGACGATCATCGAGATGCTGAACCTAGAAGGCGTGGTGCTGGAGCCTGCGGGCG CCCTGTCCATCGCCGCGCTGGAAAGGCTCGGCCGCGAGAGGCTGGAAGGCAAGACGGTCATCGCCGTGGTCTCCGGCGGT AATTTCGATTTCGAGCGCCTGCCGGACGTCAAGGAACGCGCCATGCGTTACACCGGCGTGAAGAAGTACTTCATCCTGCG CCTGCCGCAGCGCCCCGGCGCGCTGCGCGATTTCCTCAATCTGCTCGGTCCGGACGACGATATCGCCCGTTTCGAATATC TGAAGAAATCCGCCCGCAATTTCGGCTCGATCCTGATCGGCATCGAGACCAATGCGCAGGAAAACTTCGCCGGGTTGCTG GAGCGCTTCGAGGCAGCCGGTCTCGGCTATGAGGATATTACCGAAAACGACATCTTGTCGAACCTGATCATCTGA
Upstream 100 bases:
>100_bases CGCAGGAGGTTGCTGTTCAAGAAATGAAACCCAGAGTTCGTGGCCGCGCTGAAATGAGTCTTTGTCTCCGACGCCTTCCT ATGGCATAGCGGGTGCCATT
Downstream 100 bases:
>100_bases TCGGGAACGAACGACAGGGAAGGGCGGATCACCTCCGCCCTTCAAACGTGATATTGATTGAGGGAGTGAAAGCCATGGCA TCGTTTTTTTCCAAAATCCT
Product: threonine dehydratase
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 424; Mature: 424
Protein sequence:
>424_residues MNFNGLTIVDKQLVEAARREVREIFPETPLQLNEHLSRRYGASIWLKREDLSPVRSYKIRGAFNFLRKAVAKAGKDKVFV CASAGNHAQGFAFACRHFGVHGVVFMPVTTPQQKIEKTRIFGGEFIKIRLVGDIFDQCYAAARQHVQDHDGYMVPPFDHE DIIEGQATVAAEIMDQLPEGTKPDIVVMPVGGGGLSAGLTGFLAGTVKKENFVFCEPEGAPSLKKSLERGEPVTLNKVDN FVDGAAVARIGDLNFKALKDFPAEQVMLIPENAICVTIIEMLNLEGVVLEPAGALSIAALERLGRERLEGKTVIAVVSGG NFDFERLPDVKERAMRYTGVKKYFILRLPQRPGALRDFLNLLGPDDDIARFEYLKKSARNFGSILIGIETNAQENFAGLL ERFEAAGLGYEDITENDILSNLII
Sequences:
>Translated_424_residues MNFNGLTIVDKQLVEAARREVREIFPETPLQLNEHLSRRYGASIWLKREDLSPVRSYKIRGAFNFLRKAVAKAGKDKVFV CASAGNHAQGFAFACRHFGVHGVVFMPVTTPQQKIEKTRIFGGEFIKIRLVGDIFDQCYAAARQHVQDHDGYMVPPFDHE DIIEGQATVAAEIMDQLPEGTKPDIVVMPVGGGGLSAGLTGFLAGTVKKENFVFCEPEGAPSLKKSLERGEPVTLNKVDN FVDGAAVARIGDLNFKALKDFPAEQVMLIPENAICVTIIEMLNLEGVVLEPAGALSIAALERLGRERLEGKTVIAVVSGG NFDFERLPDVKERAMRYTGVKKYFILRLPQRPGALRDFLNLLGPDDDIARFEYLKKSARNFGSILIGIETNAQENFAGLL ERFEAAGLGYEDITENDILSNLII >Mature_424_residues MNFNGLTIVDKQLVEAARREVREIFPETPLQLNEHLSRRYGASIWLKREDLSPVRSYKIRGAFNFLRKAVAKAGKDKVFV CASAGNHAQGFAFACRHFGVHGVVFMPVTTPQQKIEKTRIFGGEFIKIRLVGDIFDQCYAAARQHVQDHDGYMVPPFDHE DIIEGQATVAAEIMDQLPEGTKPDIVVMPVGGGGLSAGLTGFLAGTVKKENFVFCEPEGAPSLKKSLERGEPVTLNKVDN FVDGAAVARIGDLNFKALKDFPAEQVMLIPENAICVTIIEMLNLEGVVLEPAGALSIAALERLGRERLEGKTVIAVVSGG NFDFERLPDVKERAMRYTGVKKYFILRLPQRPGALRDFLNLLGPDDDIARFEYLKKSARNFGSILIGIETNAQENFAGLL ERFEAAGLGYEDITENDILSNLII
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=339, Percent_Identity=27.4336283185841, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI33469958, Length=321, Percent_Identity=29.595015576324, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI19923959, Length=324, Percent_Identity=25.3086419753086, Blast_Score=72, Evalue=1e-12, Organism=Escherichia coli, GI1790207, Length=403, Percent_Identity=32.5062034739454, Blast_Score=178, Evalue=6e-46, Organism=Escherichia coli, GI1789505, Length=319, Percent_Identity=31.3479623824451, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI1789235, Length=219, Percent_Identity=25.5707762557078, Blast_Score=75, Evalue=9e-15, Organism=Caenorhabditis elegans, GI71991565, Length=337, Percent_Identity=30.2670623145401, Blast_Score=125, Evalue=4e-29, Organism=Caenorhabditis elegans, GI17537387, Length=395, Percent_Identity=29.3670886075949, Blast_Score=115, Evalue=3e-26, Organism=Caenorhabditis elegans, GI17508781, Length=288, Percent_Identity=28.125, Blast_Score=107, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6320930, Length=414, Percent_Identity=31.4009661835749, Blast_Score=186, Evalue=6e-48, Organism=Saccharomyces cerevisiae, GI6322631, Length=310, Percent_Identity=28.0645161290323, Blast_Score=118, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6319788, Length=285, Percent_Identity=27.3684210526316, Blast_Score=87, Evalue=6e-18, Organism=Saccharomyces cerevisiae, GI6322024, Length=181, Percent_Identity=30.3867403314917, Blast_Score=68, Evalue=2e-12, Organism=Drosophila melanogaster, GI21355833, Length=326, Percent_Identity=29.7546012269939, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI24645328, Length=257, Percent_Identity=29.9610894941634, Blast_Score=77, Evalue=3e-14,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR001721 - InterPro: IPR011820 [H]
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 46797; Mature: 46797
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFNGLTIVDKQLVEAARREVREIFPETPLQLNEHLSRRYGASIWLKREDLSPVRSYKIR CCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHEEHH GAFNFLRKAVAKAGKDKVFVCASAGNHAQGFAFACRHFGVHGVVFMPVTTPQQKIEKTRI HHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHC FGGEFIKIRLVGDIFDQCYAAARQHVQDHDGYMVPPFDHEDIIEGQATVAAEIMDQLPEG CCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHCCHHHHHHHHHHHCCCC TKPDIVVMPVGGGGLSAGLTGFLAGTVKKENFVFCEPEGAPSLKKSLERGEPVTLNKVDN CCCCEEEEECCCCCHHHHHHHHHHHCEECCCEEEECCCCCHHHHHHHHCCCCEEHHHHHH FVDGAAVARIGDLNFKALKDFPAEQVMLIPENAICVTIIEMLNLEGVVLEPAGALSIAAL HHCCHHHHEECCCCHHHHHCCCCCCEEEECCCCHHHHHHHHHCCCCEEECCCCCHHHHHH ERLGRERLEGKTVIAVVSGGNFDFERLPDVKERAMRYTGVKKYFILRLPQRPGALRDFLN HHHHHHHCCCCEEEEEEECCCCCHHHCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHH LLGPDDDIARFEYLKKSARNFGSILIGIETNAQENFAGLLERFEAAGLGYEDITENDILS HHCCCCHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHCCCCHHHCCHHHHHH NLII HHCC >Mature Secondary Structure MNFNGLTIVDKQLVEAARREVREIFPETPLQLNEHLSRRYGASIWLKREDLSPVRSYKIR CCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHEEHH GAFNFLRKAVAKAGKDKVFVCASAGNHAQGFAFACRHFGVHGVVFMPVTTPQQKIEKTRI HHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHC FGGEFIKIRLVGDIFDQCYAAARQHVQDHDGYMVPPFDHEDIIEGQATVAAEIMDQLPEG CCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHCCHHHHHHHHHHHCCCC TKPDIVVMPVGGGGLSAGLTGFLAGTVKKENFVFCEPEGAPSLKKSLERGEPVTLNKVDN CCCCEEEEECCCCCHHHHHHHHHHHCEECCCEEEECCCCCHHHHHHHHCCCCEEHHHHHH FVDGAAVARIGDLNFKALKDFPAEQVMLIPENAICVTIIEMLNLEGVVLEPAGALSIAAL HHCCHHHHEECCCCHHHHHCCCCCCEEEECCCCHHHHHHHHHCCCCEEECCCCCHHHHHH ERLGRERLEGKTVIAVVSGGNFDFERLPDVKERAMRYTGVKKYFILRLPQRPGALRDFLN HHHHHHHCCCCEEEEEEECCCCCHHHCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHH LLGPDDDIARFEYLKKSARNFGSILIGIETNAQENFAGLLERFEAAGLGYEDITENDILS HHCCCCHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHCCCCHHHCCHHHHHH NLII HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA