Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is tas [H]
Identifier: 159184612
GI number: 159184612
Start: 1082770
End: 1083813
Strand: Reverse
Name: tas [H]
Synonym: Atu1093
Alternate gene names: 159184612
Gene position: 1083813-1082770 (Counterclockwise)
Preceding gene: 15888442
Following gene: 159184610
Centisome position: 38.14
GC content: 61.88
Gene sequence:
>1044_bases ATGAAACAGAAACTATTGGGTCGCACGGGCATCTCCGTGTCTGAAATCTGCCTCGGCACCATGACGTGGGGCACGCAGAA CACTGAAGCCGAAGCGCATGCGCAGATGGATTACGCCATCGAAAACGGCGTCAATTTCTTCGATACGGCCGAGCTTTATC CCACCACCCCCGTTTCCGCCGAAACGCAGGGACGAACGGAAGACTATATCGGTGCGTGGTTCGAAAAGACCGGCAAGCGT GACCAGGTCGTGCTCGCCACCAAGGTCGCCGGCTCGGGCCGTGACTATATTCGCGGCGGTCGCGACATCGATGCCGCCTC GATCCGCGAGGCGGTGGATACCAGCCTCACGAGGCTGAAGACCGATTACATCGACCTCTACCAGATTCACTGGCCTAACC GCGGCACCTACCATTTCCGCGGCGCCTGGGGTTTCGATGCTTCCGGGCAGGACACCAAGCGCACGCTTGCCGAAATCACC GAAAAGCTCGAGACGCTCGGCGAACTGGTGAAGGCGGGCAAGATTCGCGCCATCGGCCTTTCCAACGAAAGCGCCTGGGG CACACAGAAATATATCGATATCGCCGAGGCCAACGGCCTGCCGCGCGTCGCCACCATCCAGAACGAATATAACCTGCTCT ATCGCAGCTTCGACCTCGACATGGCGGAAGTCGCCCATCACGAGGATGTCGGCCTGCTCGCCTATTCGCCGCTCGCGGCG GGGCTGCTGACAGGCAAATACCAGAACGGCGCCCGCCCGGCGGGCTCGCGCGGCACCATCAACAAGGATCTCGGCGGCCG CCTGCAGCCGCATCAGGAAGCGCCGGTCAAGGCGTATCTGGACCTTGCCGCCGCACACGGGGTAGACCCGGCCCAGCTCG CCATCGCCTTCTGCCTCACCCGCCCGTTCATGGCCTCTGCCATCATCGGCGCGACCACCATGGAACAGTTGAAGGTGGAT ATTGCGGCGGTGGATGTGGCCCTGTCGGAAGACCTGCTGAAGGGTATTGCGGCGATCCACCGGCAATATCCGATGCCGAT CTGA
Upstream 100 bases:
>100_bases GTTTTCCCCTTTCTTTTAGTCATATTTTTTCTTGCACTGCGGCAATTCCCGATTAGTTTCACACCACCTTCCAAAACTGG CCAAGCACCGGGATACCTCC
Downstream 100 bases:
>100_bases CACGATTACAGCGCGCTTTTTCGCCCTTTGCCCTTGCATTCCGGGCAAATTTGCGTATAAGCGCGCTGTTCACAACACCC GGTCCAATTGGCTGGTGGCT
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MKQKLLGRTGISVSEICLGTMTWGTQNTEAEAHAQMDYAIENGVNFFDTAELYPTTPVSAETQGRTEDYIGAWFEKTGKR DQVVLATKVAGSGRDYIRGGRDIDAASIREAVDTSLTRLKTDYIDLYQIHWPNRGTYHFRGAWGFDASGQDTKRTLAEIT EKLETLGELVKAGKIRAIGLSNESAWGTQKYIDIAEANGLPRVATIQNEYNLLYRSFDLDMAEVAHHEDVGLLAYSPLAA GLLTGKYQNGARPAGSRGTINKDLGGRLQPHQEAPVKAYLDLAAAHGVDPAQLAIAFCLTRPFMASAIIGATTMEQLKVD IAAVDVALSEDLLKGIAAIHRQYPMPI
Sequences:
>Translated_347_residues MKQKLLGRTGISVSEICLGTMTWGTQNTEAEAHAQMDYAIENGVNFFDTAELYPTTPVSAETQGRTEDYIGAWFEKTGKR DQVVLATKVAGSGRDYIRGGRDIDAASIREAVDTSLTRLKTDYIDLYQIHWPNRGTYHFRGAWGFDASGQDTKRTLAEIT EKLETLGELVKAGKIRAIGLSNESAWGTQKYIDIAEANGLPRVATIQNEYNLLYRSFDLDMAEVAHHEDVGLLAYSPLAA GLLTGKYQNGARPAGSRGTINKDLGGRLQPHQEAPVKAYLDLAAAHGVDPAQLAIAFCLTRPFMASAIIGATTMEQLKVD IAAVDVALSEDLLKGIAAIHRQYPMPI >Mature_347_residues MKQKLLGRTGISVSEICLGTMTWGTQNTEAEAHAQMDYAIENGVNFFDTAELYPTTPVSAETQGRTEDYIGAWFEKTGKR DQVVLATKVAGSGRDYIRGGRDIDAASIREAVDTSLTRLKTDYIDLYQIHWPNRGTYHFRGAWGFDASGQDTKRTLAEIT EKLETLGELVKAGKIRAIGLSNESAWGTQKYIDIAEANGLPRVATIQNEYNLLYRSFDLDMAEVAHHEDVGLLAYSPLAA GLLTGKYQNGARPAGSRGTINKDLGGRLQPHQEAPVKAYLDLAAAHGVDPAQLAIAFCLTRPFMASAIIGATTMEQLKVD IAAVDVALSEDLLKGIAAIHRQYPMPI
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436964, Length=358, Percent_Identity=29.0502793296089, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI27436966, Length=366, Percent_Identity=28.9617486338798, Blast_Score=116, Evalue=3e-26, Organism=Homo sapiens, GI27436962, Length=356, Percent_Identity=28.6516853932584, Blast_Score=115, Evalue=6e-26, Organism=Homo sapiens, GI4504825, Length=353, Percent_Identity=28.6118980169972, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI27436969, Length=353, Percent_Identity=28.6118980169972, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI223718702, Length=242, Percent_Identity=27.2727272727273, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI41327764, Length=242, Percent_Identity=27.2727272727273, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI41152114, Length=160, Percent_Identity=28.75, Blast_Score=78, Evalue=1e-14, Organism=Escherichia coli, GI1789199, Length=349, Percent_Identity=47.2779369627507, Blast_Score=323, Evalue=8e-90, Organism=Escherichia coli, GI87081735, Length=354, Percent_Identity=29.3785310734463, Blast_Score=147, Evalue=1e-36, Organism=Escherichia coli, GI1788070, Length=351, Percent_Identity=28.4900284900285, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1789375, Length=343, Percent_Identity=27.9883381924198, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1788081, Length=351, Percent_Identity=26.7806267806268, Blast_Score=85, Evalue=8e-18, Organism=Saccharomyces cerevisiae, GI6323998, Length=353, Percent_Identity=26.9121813031161, Blast_Score=107, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6319958, Length=324, Percent_Identity=25.6172839506173, Blast_Score=100, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6319951, Length=352, Percent_Identity=24.7159090909091, Blast_Score=93, Evalue=6e-20, Organism=Saccharomyces cerevisiae, GI6325169, Length=358, Percent_Identity=25.4189944134078, Blast_Score=92, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6322615, Length=268, Percent_Identity=25.3731343283582, Blast_Score=85, Evalue=1e-17, Organism=Drosophila melanogaster, GI24646155, Length=333, Percent_Identity=26.7267267267267, Blast_Score=78, Evalue=9e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 37835; Mature: 37835
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQKLLGRTGISVSEICLGTMTWGTQNTEAEAHAQMDYAIENGVNFFDTAELYPTTPVSA CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEECCCCCCCCCCCC ETQGRTEDYIGAWFEKTGKRDQVVLATKVAGSGRDYIRGGRDIDAASIREAVDTSLTRLK CCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHHH TDYIDLYQIHWPNRGTYHFRGAWGFDASGQDTKRTLAEITEKLETLGELVKAGKIRAIGL HCCEEEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC SNESAWGTQKYIDIAEANGLPRVATIQNEYNLLYRSFDLDMAEVAHHEDVGLLAYSPLAA CCCCCCCHHHHEEEHHCCCCCCEEEECCCHHEEEEECCCCHHHHHCCCCCCEEEECHHHH GLLTGKYQNGARPAGSRGTINKDLGGRLQPHQEAPVKAYLDLAAAHGVDPAQLAIAFCLT HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH RPFMASAIIGATTMEQLKVDIAAVDVALSEDLLKGIAAIHRQYPMPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKQKLLGRTGISVSEICLGTMTWGTQNTEAEAHAQMDYAIENGVNFFDTAELYPTTPVSA CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEECCCCCCCCCCCC ETQGRTEDYIGAWFEKTGKRDQVVLATKVAGSGRDYIRGGRDIDAASIREAVDTSLTRLK CCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHHH TDYIDLYQIHWPNRGTYHFRGAWGFDASGQDTKRTLAEITEKLETLGELVKAGKIRAIGL HCCEEEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC SNESAWGTQKYIDIAEANGLPRVATIQNEYNLLYRSFDLDMAEVAHHEDVGLLAYSPLAA CCCCCCCHHHHEEEHHCCCCCCEEEECCCHHEEEEECCCCHHHHHCCCCCCEEEECHHHH GLLTGKYQNGARPAGSRGTINKDLGGRLQPHQEAPVKAYLDLAAAHGVDPAQLAIAFCLT HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH RPFMASAIIGATTMEQLKVDIAAVDVALSEDLLKGIAAIHRQYPMPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9560382; 9278503 [H]