Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184551
Identifier: 159184551
GI number: 159184551
Start: 947277
End: 948131
Strand: Reverse
Name: 159184551
Synonym: Atu0958
Alternate gene names: NA
Gene position: 948131-947277 (Counterclockwise)
Preceding gene: 159184553
Following gene: 159184548
Centisome position: 33.37
GC content: 65.61
Gene sequence:
>855_bases ATGGGAGGCCTCGGAAACCGGTTCGATGGCGGCCCAAAGCGACCGCAGGACGGTCCAGCTTTCCGTTGCGCCGCCCTGCC CGTCCGCTACGTCGGTGCGCAGTTCCAGCTCCAGCCGCGCCGTCAGCTTGCCGGGATCGAGAAAAACGAGGTTCATGGCT CAAAGCCCCAGACGGCAGAAGGGCGCCACCAGCCGCTCATAACCGGCGGGAACCGCCGCAGGCTGGTTTTCCGGCGCGAC CGCGCCGCGAAAAGCGAACATCTGCGCCACATGCATCAGCATGGCGCGTTTCAGCGTGCCGGGCACATCCGTGCCGGCCT CGCCGTAACCGGCGACGAAATCGATCTCGATGCCGTTCATCGCCCGGCCGGGGCTCGGCGGATCGCGCAGCCACAGCCGC GCCGGGCGCGCCAGGCCGTCGAGCAATCTGTCAGCGCCGGTGATATCTGCCGCGCGGCCCTGACCGTCAAAAACCAGAAT CGTTTCGATGGCTTGCACCGGTCCCTTGCCAATCAGAATCACGCCGGTCTCAGGCCACCGGTCGAGATAAAGCCGCCAGG TCTGGCGGATGAGGCAAAGGCCGGTCACCCGCTCCAGATGTTCACGGGCGGTGCGAAGCAGTGCGGCCAGAAGCGCGTCC TCCTCGCCGCCGTCGAGACGCAGATGCGCCTTGACCTCGGCAAGCGTCAGCGGCTCCGCCTGCGGCGGATGAATGAGGGC ATAGGTCATGGGGTCTCCGGAAGGAAGATGGTCGAATGGGGAGCGAGCGGGTGCCGCTTGTTTCTTCTCCCTGGCCGGGG AGAAGAAAAGGGCAGCACAGCGGCTATCAATTCACCCCGAATTTCACCAGCTTGA
Upstream 100 bases:
>100_bases TGCGACGGTCTTTGCGAAAGCGCATGCCGGCAGTGACGTCGCTGCGAAAGGCCAGCCAGACGCGGTGGGTGATTGTCACA CCCTCGGCTGAGGCCCGCTC
Downstream 100 bases:
>100_bases TCGCCTCGAAATTCTGCACGCCGCCACCCACGCGCTTGGTGGTGTAGAACAGCACATAGGGTTTCGCCGAATAGGGATCG CGCAGGATACGCACGCCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MGGLGNRFDGGPKRPQDGPAFRCAALPVRYVGAQFQLQPRRQLAGIEKNEVHGSKPQTAEGRHQPLITGGNRRRLVFRRD RAAKSEHLRHMHQHGAFQRAGHIRAGLAVTGDEIDLDAVHRPAGARRIAQPQPRRARQAVEQSVSAGDICRAALTVKNQN RFDGLHRSLANQNHAGLRPPVEIKPPGLADEAKAGHPLQMFTGGAKQCGQKRVLLAAVETQMRLDLGKRQRLRLRRMNEG IGHGVSGRKMVEWGASGCRLFLLPGRGEEKGSTAAINSPRISPA
Sequences:
>Translated_284_residues MGGLGNRFDGGPKRPQDGPAFRCAALPVRYVGAQFQLQPRRQLAGIEKNEVHGSKPQTAEGRHQPLITGGNRRRLVFRRD RAAKSEHLRHMHQHGAFQRAGHIRAGLAVTGDEIDLDAVHRPAGARRIAQPQPRRARQAVEQSVSAGDICRAALTVKNQN RFDGLHRSLANQNHAGLRPPVEIKPPGLADEAKAGHPLQMFTGGAKQCGQKRVLLAAVETQMRLDLGKRQRLRLRRMNEG IGHGVSGRKMVEWGASGCRLFLLPGRGEEKGSTAAINSPRISPA >Mature_283_residues GGLGNRFDGGPKRPQDGPAFRCAALPVRYVGAQFQLQPRRQLAGIEKNEVHGSKPQTAEGRHQPLITGGNRRRLVFRRDR AAKSEHLRHMHQHGAFQRAGHIRAGLAVTGDEIDLDAVHRPAGARRIAQPQPRRARQAVEQSVSAGDICRAALTVKNQNR FDGLHRSLANQNHAGLRPPVEIKPPGLADEAKAGHPLQMFTGGAKQCGQKRVLLAAVETQMRLDLGKRQRLRLRRMNEGI GHGVSGRKMVEWGASGCRLFLLPGRGEEKGSTAAINSPRISPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31031; Mature: 30900
Theoretical pI: Translated: 11.99; Mature: 11.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGLGNRFDGGPKRPQDGPAFRCAALPVRYVGAQFQLQPRRQLAGIEKNEVHGSKPQTAE CCCCCCCCCCCCCCCCCCCCEEEHHCHHHHHCCEEEECHHHHHCCCCHHCCCCCCCCCCC GRHQPLITGGNRRRLVFRRDRAAKSEHLRHMHQHGAFQRAGHIRAGLAVTGDEIDLDAVH CCCCCEEECCCCEEEEEECHHHHHHHHHHHHHHCCHHHHCCCEEECEEEECCCCCHHHHC RPAGARRIAQPQPRRARQAVEQSVSAGDICRAALTVKNQNRFDGLHRSLANQNHAGLRPP CCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHEECCCHHHHHHHHHHHCCCCCCCCCC VEIKPPGLADEAKAGHPLQMFTGGAKQCGQKRVLLAAVETQMRLDLGKRQRLRLRRMNEG CEECCCCCCCCCCCCCCHHHHCCCHHHHCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHH IGHGVSGRKMVEWGASGCRLFLLPGRGEEKGSTAAINSPRISPA CCCCCCCCEEEEECCCCCEEEEECCCCCCCCCEEECCCCCCCCC >Mature Secondary Structure GGLGNRFDGGPKRPQDGPAFRCAALPVRYVGAQFQLQPRRQLAGIEKNEVHGSKPQTAE CCCCCCCCCCCCCCCCCCCEEEHHCHHHHHCCEEEECHHHHHCCCCHHCCCCCCCCCCC GRHQPLITGGNRRRLVFRRDRAAKSEHLRHMHQHGAFQRAGHIRAGLAVTGDEIDLDAVH CCCCCEEECCCCEEEEEECHHHHHHHHHHHHHHCCHHHHCCCEEECEEEECCCCCHHHHC RPAGARRIAQPQPRRARQAVEQSVSAGDICRAALTVKNQNRFDGLHRSLANQNHAGLRPP CCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHEECCCHHHHHHHHHHHCCCCCCCCCC VEIKPPGLADEAKAGHPLQMFTGGAKQCGQKRVLLAAVETQMRLDLGKRQRLRLRRMNEG CEECCCCCCCCCCCCCCHHHHCCCHHHHCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHH IGHGVSGRKMVEWGASGCRLFLLPGRGEEKGSTAAINSPRISPA CCCCCCCCEEEEECCCCCEEEEECCCCCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA