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The map label for this gene is ydiF [H]

Identifier: 159184498

GI number: 159184498

Start: 850513

End: 851874

Strand: Reverse

Name: ydiF [H]

Synonym: Atu0850

Alternate gene names: 159184498

Gene position: 851874-850513 (Counterclockwise)

Preceding gene: 15888192

Following gene: 15888187

Centisome position: 29.98

GC content: 62.56

Gene sequence:

>1362_bases
ATGGAGCCCAGCAGCGGCGATATCACCCGGCTGCGCGGGTTGACGCAGTCGATCGTCCACCAGAATCTGCCCTTCGCGCT
GATGGACCACACGATGCGCGACGCCGTGCTTTCCGCCCTGCCGGCGGACACGATCGACAGCGACAGCTGGCGCGCCGACA
TCATCTTCGACGTCATGCTGGTGCCCGAACCCTTCCGTGAGCGCCGGCTGAAAGAACTGAGCGGCGGCTGGCAAAGGCTC
GCGATGCTGGCCAGGGCATGGATCACCGAACCTGACGTGCTGCTGCTCGACGAGCCGACCAACCATCTCGACCTCGAAAA
GATCAACGTGTTGGAAAGCTGGCTCGGTGAATTGCCGCGCGATACGGCCGTCATCATCGTCAGCCATGACCGCGCTTTTC
TCGACAATGTCACCCGGACCACGCTGTTCCTGCGACCGGAAAACTCGGCGCTGTTCCGCCTGTCCTATGGCCATGCGCGC
GCGGCGCTGGAGGAGGAAGATGCCGCCGATGAGCGGCGTTTCCAGCGCGACATGAAAACCGCGCAGCAATTGCGCCGGCA
GGCGGCCAAGCTCAACAATATCGGCATCAATTCCGGCAGCGATCTCCTGACCATCAAGACCAAGCAATTGCGCCAGCGTG
CGGAAAAGATCGAGGAGAAAGCGCGCCCTGCCCATAGCGACCGATCCGCCGGCAAGATCCAGCTCGCCAATCGCGGCACC
CATGCCAAGGTTCTGATGACGCTGGAGGACGTGCCGGTCTCGACGCCGGATGGAACGTTGCTGTTTCGCACCGGCCGGCA
ATTTATCCGCCAGGGCGACCGCATCGTCATTCTCGGCCGCAATGGCGTCGGCAAGACGCGGCTGATGTCGCTGCTGCAGG
CGGCGGTGACGGCTGCTGGCCAGATAGAGGACGGCATAAAGGCCACGCCCTCGCTGGTGGCCGGTTATGTCGACCAGTCT
TTGGCCGAAATAGACGATGACAGCACGCCGGCGGCGCTGTTGTCGCGCCGTTTCGACATTGGTGACCAGCGCATCCACGG
CCTGCTCGCCGGCGCTGGCATCGACATGGAAATGCAGAAACGCCGCATCGCCACACTCTCCGGTGGGCAGAAGGCGCGGC
TTGCCATGCTGGCGCTGCGGCTGGCGGAGCCGAATTTCTACCTGCTGGACGAACCCACCAACCATCTTGATATAGATGGT
CAGGAAACGCTGGAGGCGGAAATCATCAGCCGTGAGGCCAGCTGCATGCTTGTCTCGCACGACAGGAGTTTCGTGCGGAC
GGTCGGAACCCGCTTCTGGCTGATCGAAAAGCGCAAGCTGGTGGAAGTCGACAATCCCGAAGCGTTTTTCGCCTCGGCTT
GA

Upstream 100 bases:

>100_bases
TTCCAATCTCAGCCTCACCGTGAATGCGGGAGACCGCATCGGCATCGTTGCGGCCAATGGCTGCGGCAAATCCACCCTGC
TCAACTGCCTCGCAGGAGAC

Downstream 100 bases:

>100_bases
TGCTCCCCACCAACAATGCCTCGTCAGCCGAGCAGGCTGGCGAGGCGTGGATCGCCGGCGAAATCCGAGACCGCGAAACC
GGTTCTGCGCATTGGAAATT

Product: ABC transporter, nucleotide binding/ATPase protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 453; Mature: 453

Protein sequence:

>453_residues
MEPSSGDITRLRGLTQSIVHQNLPFALMDHTMRDAVLSALPADTIDSDSWRADIIFDVMLVPEPFRERRLKELSGGWQRL
AMLARAWITEPDVLLLDEPTNHLDLEKINVLESWLGELPRDTAVIIVSHDRAFLDNVTRTTLFLRPENSALFRLSYGHAR
AALEEEDAADERRFQRDMKTAQQLRRQAAKLNNIGINSGSDLLTIKTKQLRQRAEKIEEKARPAHSDRSAGKIQLANRGT
HAKVLMTLEDVPVSTPDGTLLFRTGRQFIRQGDRIVILGRNGVGKTRLMSLLQAAVTAAGQIEDGIKATPSLVAGYVDQS
LAEIDDDSTPAALLSRRFDIGDQRIHGLLAGAGIDMEMQKRRIATLSGGQKARLAMLALRLAEPNFYLLDEPTNHLDIDG
QETLEAEIISREASCMLVSHDRSFVRTVGTRFWLIEKRKLVEVDNPEAFFASA

Sequences:

>Translated_453_residues
MEPSSGDITRLRGLTQSIVHQNLPFALMDHTMRDAVLSALPADTIDSDSWRADIIFDVMLVPEPFRERRLKELSGGWQRL
AMLARAWITEPDVLLLDEPTNHLDLEKINVLESWLGELPRDTAVIIVSHDRAFLDNVTRTTLFLRPENSALFRLSYGHAR
AALEEEDAADERRFQRDMKTAQQLRRQAAKLNNIGINSGSDLLTIKTKQLRQRAEKIEEKARPAHSDRSAGKIQLANRGT
HAKVLMTLEDVPVSTPDGTLLFRTGRQFIRQGDRIVILGRNGVGKTRLMSLLQAAVTAAGQIEDGIKATPSLVAGYVDQS
LAEIDDDSTPAALLSRRFDIGDQRIHGLLAGAGIDMEMQKRRIATLSGGQKARLAMLALRLAEPNFYLLDEPTNHLDIDG
QETLEAEIISREASCMLVSHDRSFVRTVGTRFWLIEKRKLVEVDNPEAFFASA
>Mature_453_residues
MEPSSGDITRLRGLTQSIVHQNLPFALMDHTMRDAVLSALPADTIDSDSWRADIIFDVMLVPEPFRERRLKELSGGWQRL
AMLARAWITEPDVLLLDEPTNHLDLEKINVLESWLGELPRDTAVIIVSHDRAFLDNVTRTTLFLRPENSALFRLSYGHAR
AALEEEDAADERRFQRDMKTAQQLRRQAAKLNNIGINSGSDLLTIKTKQLRQRAEKIEEKARPAHSDRSAGKIQLANRGT
HAKVLMTLEDVPVSTPDGTLLFRTGRQFIRQGDRIVILGRNGVGKTRLMSLLQAAVTAAGQIEDGIKATPSLVAGYVDQS
LAEIDDDSTPAALLSRRFDIGDQRIHGLLAGAGIDMEMQKRRIATLSGGQKARLAMLALRLAEPNFYLLDEPTNHLDIDG
QETLEAEIISREASCMLVSHDRSFVRTVGTRFWLIEKRKLVEVDNPEAFFASA

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=405, Percent_Identity=28.3950617283951, Blast_Score=149, Evalue=7e-36,
Organism=Homo sapiens, GI69354671, Length=391, Percent_Identity=28.1329923273657, Blast_Score=139, Evalue=4e-33,
Organism=Homo sapiens, GI10947135, Length=391, Percent_Identity=28.1329923273657, Blast_Score=139, Evalue=4e-33,
Organism=Homo sapiens, GI10947137, Length=406, Percent_Identity=26.6009852216749, Blast_Score=123, Evalue=4e-28,
Organism=Homo sapiens, GI27881506, Length=406, Percent_Identity=26.6009852216749, Blast_Score=122, Evalue=5e-28,
Organism=Escherichia coli, GI1787182, Length=387, Percent_Identity=33.5917312661499, Blast_Score=149, Evalue=5e-37,
Organism=Escherichia coli, GI1789751, Length=390, Percent_Identity=30.2564102564103, Blast_Score=149, Evalue=5e-37,
Organism=Escherichia coli, GI1787041, Length=390, Percent_Identity=28.7179487179487, Blast_Score=137, Evalue=2e-33,
Organism=Escherichia coli, GI2367384, Length=393, Percent_Identity=28.2442748091603, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI87081791, Length=206, Percent_Identity=28.6407766990291, Blast_Score=63, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=418, Percent_Identity=27.9904306220096, Blast_Score=154, Evalue=7e-38,
Organism=Caenorhabditis elegans, GI17553372, Length=399, Percent_Identity=27.3182957393484, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17555318, Length=382, Percent_Identity=25.3926701570681, Blast_Score=119, Evalue=4e-27,
Organism=Saccharomyces cerevisiae, GI6321121, Length=372, Percent_Identity=29.0322580645161, Blast_Score=140, Evalue=4e-34,
Organism=Saccharomyces cerevisiae, GI6320874, Length=408, Percent_Identity=25.2450980392157, Blast_Score=120, Evalue=5e-28,
Organism=Saccharomyces cerevisiae, GI6325030, Length=282, Percent_Identity=27.3049645390071, Blast_Score=79, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6324314, Length=175, Percent_Identity=32, Blast_Score=67, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24641342, Length=395, Percent_Identity=29.3670886075949, Blast_Score=149, Evalue=3e-36,
Organism=Drosophila melanogaster, GI24666836, Length=425, Percent_Identity=29.4117647058824, Blast_Score=146, Evalue=3e-35,
Organism=Drosophila melanogaster, GI24642252, Length=379, Percent_Identity=26.6490765171504, Blast_Score=118, Evalue=7e-27,
Organism=Drosophila melanogaster, GI18859989, Length=379, Percent_Identity=26.6490765171504, Blast_Score=118, Evalue=7e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 50624; Mature: 50624

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPSSGDITRLRGLTQSIVHQNLPFALMDHTMRDAVLSALPADTIDSDSWRADIIFDVML
CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEE
VPEPFRERRLKELSGGWQRLAMLARAWITEPDVLLLDEPTNHLDLEKINVLESWLGELPR
CCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCC
DTAVIIVSHDRAFLDNVTRTTLFLRPENSALFRLSYGHARAALEEEDAADERRFQRDMKT
CCEEEEEECCHHHHHCCCEEEEEEECCCCEEEEEECCHHHHHCCHHCCHHHHHHHHHHHH
AQQLRRQAAKLNNIGINSGSDLLTIKTKQLRQRAEKIEEKARPAHSDRSAGKIQLANRGT
HHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCC
HAKVLMTLEDVPVSTPDGTLLFRTGRQFIRQGDRIVILGRNGVGKTRLMSLLQAAVTAAG
CEEEEEEEECCCCCCCCCEEEEHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCC
QIEDGIKATPSLVAGYVDQSLAEIDDDSTPAALLSRRFDIGDQRIHGLLAGAGIDMEMQK
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHH
RRIATLSGGQKARLAMLALRLAEPNFYLLDEPTNHLDIDGQETLEAEIISREASCMLVSH
HHHHHCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEEC
DRSFVRTVGTRFWLIEKRKLVEVDNPEAFFASA
CHHHHHHHCCEEEEEECCEEEECCCCCEEECCC
>Mature Secondary Structure
MEPSSGDITRLRGLTQSIVHQNLPFALMDHTMRDAVLSALPADTIDSDSWRADIIFDVML
CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEE
VPEPFRERRLKELSGGWQRLAMLARAWITEPDVLLLDEPTNHLDLEKINVLESWLGELPR
CCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCC
DTAVIIVSHDRAFLDNVTRTTLFLRPENSALFRLSYGHARAALEEEDAADERRFQRDMKT
CCEEEEEECCHHHHHCCCEEEEEEECCCCEEEEEECCHHHHHCCHHCCHHHHHHHHHHHH
AQQLRRQAAKLNNIGINSGSDLLTIKTKQLRQRAEKIEEKARPAHSDRSAGKIQLANRGT
HHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCC
HAKVLMTLEDVPVSTPDGTLLFRTGRQFIRQGDRIVILGRNGVGKTRLMSLLQAAVTAAG
CEEEEEEEECCCCCCCCCEEEEHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCC
QIEDGIKATPSLVAGYVDQSLAEIDDDSTPAALLSRRFDIGDQRIHGLLAGAGIDMEMQK
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHH
RRIATLSGGQKARLAMLALRLAEPNFYLLDEPTNHLDIDGQETLEAEIISREASCMLVSH
HHHHHCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEEC
DRSFVRTVGTRFWLIEKRKLVEVDNPEAFFASA
CHHHHHHHCCEEEEEECCEEEECCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Endonuclease; Excision [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]